| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is bceB [H]
Identifier: 170756069
GI number: 170756069
Start: 2288938
End: 2290929
Strand: Reverse
Name: bceB [H]
Synonym: CLD_2490
Alternate gene names: 170756069
Gene position: 2290929-2288938 (Counterclockwise)
Preceding gene: 170757494
Following gene: 170755975
Centisome position: 57.88
GC content: 24.7
Gene sequence:
>1992_bases ATGTATTCTAAGATAGCTCTTAAAAATATAAAGAAAAGTTATAAAGATTATACTATATATTTCTTAACACTAATACTAGC TGTTTGTATATTTTATAGCTTTAACTCTATAGATTCACAAAAGGCACTTACTGATATAAAATCTTCAGGTGGAAGTTATG TATCTGGATTAATGGATTTTATGTCTGCTGTATCAGTATTTGTATCAATAATATTAGGCAGTTTAATATTATATGCAAAT AATTTTTTAATAAAGAAACGTAAAAAAGAATTGGGGATATATATGATTTTAGGTATGGGAAAAAGAAAAATATCTAAAAT CTTAGTAACAGAGACCTCTATAGTAGGAGTTATATCTTTAATTGCAGGTCTTATAATAGGAATGGGAGTATCACAGGGGT TATCTATTTTTACACTAAAATTATTTGAGGTTTCTATAAATGAATATAGATTCGCTGTTTCAACAAGAGCTATAAGTAAA ACTATATTATACTTTGGAATAATGTTTTTACTTGTTATGTTATTTAATGTATTTGTTATTTCGAAATACAAGATAATTGA TTTGTTAACATCAGGTAGAAAAAATGAAAATATAAAATTTAAAAATACATTTATATATTTATTATCATTTCTTCTATGTG TAGTATTACTTGGGTTTGCATATAAATCTATACTAAAAACAGGGTTGAAATTAAGAGAGCCTATGTTTAAGCCATCCATA GCTTTTGTAATAGTAGGTACGGTGTTATTTTTCTTTAGTTTAGCTGGAGTTATATTATATGTAGTAAATAAAAATAAAAA GATATATTTTAAAGGACTAAATATGTTTGTGGTAAAACAAATAAATAGTAAGGTTAATACAAACTTTTTATCCATGTCTT TAATTTGTTTAATGTTATTTATCACAATACTTATATTATCTACGGGAATAAGTTTTAAAAATGGCTTGGAAGAAGGGGTT AAAATAAGAGCACCTTTTGATGCTAGTATAATAATATCAAATAATAGTAAAAAAAACAATTTAGAAGATGTATTAGATAA GATCAATTTTAAAAGGAGTAAAGATGAAAAATATGCAACTTTCAATGAATATTTTTCAGGGGTAAAGCTAGAGAGCTTGT TATCAATTACAGATAAAGATTATAAAGATGGTGAGGTATCTTTTGTTAAAATATCTGATTATAATAAAATTTTAAAACTA AAGGGGAAAAAAGAAATAAATTTAAATAAAGATGAGATTTTAGTTATGTCTACCAATAATGCCGTGGTGAAGCAGGCTAA TGAAAAGCTAAAAAATAGTAAAAAATTTAATATTAAAGGAAAAGAGTATTTAGTGAAAAATGATACAATAATAGAAGAAA ATCTTGCAACTTATCTTTTGGCAGATAATGTTTTCACAATAGTTATAAGTGATGAATTTTTATATGATTATAATAAAATT GTTTACTCTATACTCAATGTAATGTATTCAAATAAAAATAGAGAACAAAATAATAAAAAATATAGCGAAATAAATAAGAA CTTTGTAGGTGGTAAGTACAAAAGTTTAAATATTTCATATATGGGTGCTTTTTCAAAGGATGATATTTATTCTCACAGTA AGGGCGGAACAACAACAATATTATTTGTTGGAATATATTTAGGACTAGTATTTTTAATAACTAGCATGGCAGTACTCGCT CTTCAACAGTTATCAGAAGCTAGTGATAGTATAGAAAGATATAAAGCTTTAAAGAGAATTGGTGCAAGTTCAAAAATGAT AGAAAAAACAATCTTCCTTCAGACCTTAATATATTTTGCTCTTCCAATGATTCTTGCATTAGTTCATTCAATGATTGGAA TTAAGGTGATCAGTGACTATATAGAGGTATTTACTAAAATTGATATTAGCTTTTCAGCTTTAATAACATCTTTAATATTT ATTGTAGTTTATGCAGGATATTTTTATACAACATATATAGGATATAAAAATATAGTGGAAAGTAATATTTAA
Upstream 100 bases:
>100_bases GGGAAAATGTTTAATGAATTAGTGAGAGGTAAGGACACTAGAAAAGAATTTTTTAATAAAATTATAGAAGTTACATCTCT TCTTGGAGGTGACGACAATA
Downstream 100 bases:
>100_bases TTTATAAACAGATTTCTAAGCTTCAGAGAGAGTTTTTACTCATACTAAAGCTTAGAAATCTTTATCTAGAGACCTATACA ATTTTAGCTGCTGATTTGAA
Product: ABC transporter, permease protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 663; Mature: 663
Protein sequence:
>663_residues MYSKIALKNIKKSYKDYTIYFLTLILAVCIFYSFNSIDSQKALTDIKSSGGSYVSGLMDFMSAVSVFVSIILGSLILYAN NFLIKKRKKELGIYMILGMGKRKISKILVTETSIVGVISLIAGLIIGMGVSQGLSIFTLKLFEVSINEYRFAVSTRAISK TILYFGIMFLLVMLFNVFVISKYKIIDLLTSGRKNENIKFKNTFIYLLSFLLCVVLLGFAYKSILKTGLKLREPMFKPSI AFVIVGTVLFFFSLAGVILYVVNKNKKIYFKGLNMFVVKQINSKVNTNFLSMSLICLMLFITILILSTGISFKNGLEEGV KIRAPFDASIIISNNSKKNNLEDVLDKINFKRSKDEKYATFNEYFSGVKLESLLSITDKDYKDGEVSFVKISDYNKILKL KGKKEINLNKDEILVMSTNNAVVKQANEKLKNSKKFNIKGKEYLVKNDTIIEENLATYLLADNVFTIVISDEFLYDYNKI VYSILNVMYSNKNREQNNKKYSEINKNFVGGKYKSLNISYMGAFSKDDIYSHSKGGTTTILFVGIYLGLVFLITSMAVLA LQQLSEASDSIERYKALKRIGASSKMIEKTIFLQTLIYFALPMILALVHSMIGIKVISDYIEVFTKIDISFSALITSLIF IVVYAGYFYTTYIGYKNIVESNI
Sequences:
>Translated_663_residues MYSKIALKNIKKSYKDYTIYFLTLILAVCIFYSFNSIDSQKALTDIKSSGGSYVSGLMDFMSAVSVFVSIILGSLILYAN NFLIKKRKKELGIYMILGMGKRKISKILVTETSIVGVISLIAGLIIGMGVSQGLSIFTLKLFEVSINEYRFAVSTRAISK TILYFGIMFLLVMLFNVFVISKYKIIDLLTSGRKNENIKFKNTFIYLLSFLLCVVLLGFAYKSILKTGLKLREPMFKPSI AFVIVGTVLFFFSLAGVILYVVNKNKKIYFKGLNMFVVKQINSKVNTNFLSMSLICLMLFITILILSTGISFKNGLEEGV KIRAPFDASIIISNNSKKNNLEDVLDKINFKRSKDEKYATFNEYFSGVKLESLLSITDKDYKDGEVSFVKISDYNKILKL KGKKEINLNKDEILVMSTNNAVVKQANEKLKNSKKFNIKGKEYLVKNDTIIEENLATYLLADNVFTIVISDEFLYDYNKI VYSILNVMYSNKNREQNNKKYSEINKNFVGGKYKSLNISYMGAFSKDDIYSHSKGGTTTILFVGIYLGLVFLITSMAVLA LQQLSEASDSIERYKALKRIGASSKMIEKTIFLQTLIYFALPMILALVHSMIGIKVISDYIEVFTKIDISFSALITSLIF IVVYAGYFYTTYIGYKNIVESNI >Mature_663_residues MYSKIALKNIKKSYKDYTIYFLTLILAVCIFYSFNSIDSQKALTDIKSSGGSYVSGLMDFMSAVSVFVSIILGSLILYAN NFLIKKRKKELGIYMILGMGKRKISKILVTETSIVGVISLIAGLIIGMGVSQGLSIFTLKLFEVSINEYRFAVSTRAISK TILYFGIMFLLVMLFNVFVISKYKIIDLLTSGRKNENIKFKNTFIYLLSFLLCVVLLGFAYKSILKTGLKLREPMFKPSI AFVIVGTVLFFFSLAGVILYVVNKNKKIYFKGLNMFVVKQINSKVNTNFLSMSLICLMLFITILILSTGISFKNGLEEGV KIRAPFDASIIISNNSKKNNLEDVLDKINFKRSKDEKYATFNEYFSGVKLESLLSITDKDYKDGEVSFVKISDYNKILKL KGKKEINLNKDEILVMSTNNAVVKQANEKLKNSKKFNIKGKEYLVKNDTIIEENLATYLLADNVFTIVISDEFLYDYNKI VYSILNVMYSNKNREQNNKKYSEINKNFVGGKYKSLNISYMGAFSKDDIYSHSKGGTTTILFVGIYLGLVFLITSMAVLA LQQLSEASDSIERYKALKRIGASSKMIEKTIFLQTLIYFALPMILALVHSMIGIKVISDYIEVFTKIDISFSALITSLIF IVVYAGYFYTTYIGYKNIVESNI
Specific function: Part of the ABC transporter complex BceAB (TC 3.A.1.123.5) involved in bacitracin export [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 75007; Mature: 75007
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSKIALKNIKKSYKDYTIYFLTLILAVCIFYSFNSIDSQKALTDIKSSGGSYVSGLMDF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHH MSAVSVFVSIILGSLILYANNFLIKKRKKELGIYMILGMGKRKISKILVTETSIVGVISL HHHHHHHHHHHHHHHHHHHCCHHHEEHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHH IAGLIIGMGVSQGLSIFTLKLFEVSINEYRFAVSTRAISKTILYFGIMFLLVMLFNVFVI HHHHHHHCCCCCCCCEEEEEHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKYKIIDLLTSGRKNENIKFKNTFIYLLSFLLCVVLLGFAYKSILKTGLKLREPMFKPSI HHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCHH AFVIVGTVLFFFSLAGVILYVVNKNKKIYFKGLNMFVVKQINSKVNTNFLSMSLICLMLF HHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHH ITILILSTGISFKNGLEEGVKIRAPFDASIIISNNSKKNNLEDVLDKINFKRSKDEKYAT HHHHHHHCCCCHHCCHHCCCEEECCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCHHHH FNEYFSGVKLESLLSITDKDYKDGEVSFVKISDYNKILKLKGKKEINLNKDEILVMSTNN HHHHHCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHEECCCCCCCCCCCCEEEEECCC AVVKQANEKLKNSKKFNIKGKEYLVKNDTIIEENLATYLLADNVFTIVISDEFLYDYNKI HHHHHHHHHHCCCCEECCCCCEEEEECCCEEHHHHHHHEEECCEEEEEEECHHHHHHHHH VYSILNVMYSNKNREQNNKKYSEINKNFVGGKYKSLNISYMGAFSKDDIYSHSKGGTTTI HHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHH LFVGIYLGLVFLITSMAVLALQQLSEASDSIERYKALKRIGASSKMIEKTIFLQTLIYFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LPMILALVHSMIGIKVISDYIEVFTKIDISFSALITSLIFIVVYAGYFYTTYIGYKNIVE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNI CCC >Mature Secondary Structure MYSKIALKNIKKSYKDYTIYFLTLILAVCIFYSFNSIDSQKALTDIKSSGGSYVSGLMDF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHH MSAVSVFVSIILGSLILYANNFLIKKRKKELGIYMILGMGKRKISKILVTETSIVGVISL HHHHHHHHHHHHHHHHHHHCCHHHEEHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHH IAGLIIGMGVSQGLSIFTLKLFEVSINEYRFAVSTRAISKTILYFGIMFLLVMLFNVFVI HHHHHHHCCCCCCCCEEEEEHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKYKIIDLLTSGRKNENIKFKNTFIYLLSFLLCVVLLGFAYKSILKTGLKLREPMFKPSI HHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCHH AFVIVGTVLFFFSLAGVILYVVNKNKKIYFKGLNMFVVKQINSKVNTNFLSMSLICLMLF HHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHH ITILILSTGISFKNGLEEGVKIRAPFDASIIISNNSKKNNLEDVLDKINFKRSKDEKYAT HHHHHHHCCCCHHCCHHCCCEEECCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCHHHH FNEYFSGVKLESLLSITDKDYKDGEVSFVKISDYNKILKLKGKKEINLNKDEILVMSTNN HHHHHCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHEECCCCCCCCCCCCEEEEECCC AVVKQANEKLKNSKKFNIKGKEYLVKNDTIIEENLATYLLADNVFTIVISDEFLYDYNKI HHHHHHHHHHCCCCEECCCCCEEEEECCCEEHHHHHHHEEECCEEEEEEECHHHHHHHHH VYSILNVMYSNKNREQNNKKYSEINKNFVGGKYKSLNISYMGAFSKDDIYSHSKGGTTTI HHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHH LFVGIYLGLVFLITSMAVLALQQLSEASDSIERYKALKRIGASSKMIEKTIFLQTLIYFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LPMILALVHSMIGIKVISDYIEVFTKIDISFSALITSLIFIVVYAGYFYTTYIGYKNIVE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNI CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 14612242; 12890034 [H]