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The map label for this gene is yufP [H]

Identifier: 170756043

GI number: 170756043

Start: 265123

End: 266226

Strand: Direct

Name: yufP [H]

Synonym: CLD_0554

Alternate gene names: 170756043

Gene position: 265123-266226 (Clockwise)

Preceding gene: 170755189

Following gene: 170756056

Centisome position: 6.7

GC content: 33.15

Gene sequence:

>1104_bases
GTGACTGAAAATAACAAAAAAAGAACCATAAGTAATGGTCTTATAAATGTTTTAAAATCCTTAGCATTTCCACTTGGTGC
AATTGTAATTTCTATATTCGTATCTGTTTTCTTTGTTATGTGGGCAAAGGGATACCCAATAACTCAATATTTTTCAGCTT
TTAGTGATCTTTTCACTACTATATGGCAAGGAAGCTTTGGAGATAAAAGAAAAACTCTTGAAACAATGATATATGTTACC
CCTTTAATATTTACAGGAGTAGCTAACGCTATAGCCTTTAGATGTGGATTATTTAATATAGGGGTTGAAGGACAGTTTAT
AGTAGGTATGATATCTGCAGCAGTTCTAGGACTTATTCCAGGCTTGAATCCAGTTGTACATGGAATATTAATAATATTAG
GTGGAATAGTAGCTGGCTCTATTTGGGGAGGAATACCAGGATATTTAAAAGCTAAGGTAGGAACAAATGAAGTTATAAAC
ACAATAATGATGAATTATTTAGGATTATATTTGGGAAATTATATAATATTAAGATCTAGATTTGCGGTTAAAAGTTCAGC
TAGTACACCTATAATTCAAAAGAGTGCTCAATTACTAAGATTCAGTAGCACTAGTAGAGCAAGTATAAGTCTAATAATAG
GAATAGTGTTTGCTATATTCGTATATTGGCTCTTATGGAAAACTACTGTAGGATATGAGATAAGAGCAGTTGGATTTAAT
CCATCTGGAGCTGAGTATGGCGGAATTAATGTAGCTAAAAATACAATTTTAGCTATGGTTTTATCAGGAGCTATTGCGGG
TATAGGTGGAGCTACCCATGTAGCAGGTGTTATGCATCAAGCGCAAGATATGATGGCATTACCTGGATTCGGCTTTGATG
GTATAGCCGTTGCCCTACTGGCTAAAAATAATCCTATAGGGTGTATAGCTTCTGCTATATTATTTGGAGCATTAAACAGT
AGTTCTAAGATACTTCAACTTAATGGCATACCAAAACAAATAGTTTACCTCGTTCAATCAATAATAATAATATTTGTAGC
AACTGATTATATAGTAAAATATTTCTCAGAGAAAAAGAGTAGGAAGGTGTTAATAAATGGATAG

Upstream 100 bases:

>100_bases
ATAATAGAAATATTAGATAGAAAAGATGCCACAGAGCAAAAATTAGGTGTGTTAATGGCTGGTGGTAAATCAGAGGATGC
TAGGAAAGAGGTGAAATAAG

Downstream 100 bases:

>100_bases
TTTAATCATAATAGGATTAGTAACAGCCACATTAAGGACAGCTACACCTTTGGTTTTTGCAGGTCTCGGAGGGGTATTTT
CAGAAAGAGCTGGTGTAGTT

Product: putative sugar ABC transporter, permease protein

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MTENNKKRTISNGLINVLKSLAFPLGAIVISIFVSVFFVMWAKGYPITQYFSAFSDLFTTIWQGSFGDKRKTLETMIYVT
PLIFTGVANAIAFRCGLFNIGVEGQFIVGMISAAVLGLIPGLNPVVHGILIILGGIVAGSIWGGIPGYLKAKVGTNEVIN
TIMMNYLGLYLGNYIILRSRFAVKSSASTPIIQKSAQLLRFSSTSRASISLIIGIVFAIFVYWLLWKTTVGYEIRAVGFN
PSGAEYGGINVAKNTILAMVLSGAIAGIGGATHVAGVMHQAQDMMALPGFGFDGIAVALLAKNNPIGCIASAILFGALNS
SSKILQLNGIPKQIVYLVQSIIIIFVATDYIVKYFSEKKSRKVLING

Sequences:

>Translated_367_residues
MTENNKKRTISNGLINVLKSLAFPLGAIVISIFVSVFFVMWAKGYPITQYFSAFSDLFTTIWQGSFGDKRKTLETMIYVT
PLIFTGVANAIAFRCGLFNIGVEGQFIVGMISAAVLGLIPGLNPVVHGILIILGGIVAGSIWGGIPGYLKAKVGTNEVIN
TIMMNYLGLYLGNYIILRSRFAVKSSASTPIIQKSAQLLRFSSTSRASISLIIGIVFAIFVYWLLWKTTVGYEIRAVGFN
PSGAEYGGINVAKNTILAMVLSGAIAGIGGATHVAGVMHQAQDMMALPGFGFDGIAVALLAKNNPIGCIASAILFGALNS
SSKILQLNGIPKQIVYLVQSIIIIFVATDYIVKYFSEKKSRKVLING
>Mature_366_residues
TENNKKRTISNGLINVLKSLAFPLGAIVISIFVSVFFVMWAKGYPITQYFSAFSDLFTTIWQGSFGDKRKTLETMIYVTP
LIFTGVANAIAFRCGLFNIGVEGQFIVGMISAAVLGLIPGLNPVVHGILIILGGIVAGSIWGGIPGYLKAKVGTNEVINT
IMMNYLGLYLGNYIILRSRFAVKSSASTPIIQKSAQLLRFSSTSRASISLIIGIVFAIFVYWLLWKTTVGYEIRAVGFNP
SGAEYGGINVAKNTILAMVLSGAIAGIGGATHVAGVMHQAQDMMALPGFGFDGIAVALLAKNNPIGCIASAILFGALNSS
SKILQLNGIPKQIVYLVQSIIIIFVATDYIVKYFSEKKSRKVLING

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 39328; Mature: 39197

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTENNKKRTISNGLINVLKSLAFPLGAIVISIFVSVFFVMWAKGYPITQYFSAFSDLFTT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
IWQGSFGDKRKTLETMIYVTPLIFTGVANAIAFRCGLFNIGVEGQFIVGMISAAVLGLIP
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCC
GLNPVVHGILIILGGIVAGSIWGGIPGYLKAKVGTNEVINTIMMNYLGLYLGNYIILRSR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCHHHEEHH
FAVKSSASTPIIQKSAQLLRFSSTSRASISLIIGIVFAIFVYWLLWKTTVGYEIRAVGFN
HHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
PSGAEYGGINVAKNTILAMVLSGAIAGIGGATHVAGVMHQAQDMMALPGFGFDGIAVALL
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEE
AKNNPIGCIASAILFGALNSSSKILQLNGIPKQIVYLVQSIIIIFVATDYIVKYFSEKKS
ECCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RKVLING
CEEEECC
>Mature Secondary Structure 
TENNKKRTISNGLINVLKSLAFPLGAIVISIFVSVFFVMWAKGYPITQYFSAFSDLFTT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
IWQGSFGDKRKTLETMIYVTPLIFTGVANAIAFRCGLFNIGVEGQFIVGMISAAVLGLIP
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCC
GLNPVVHGILIILGGIVAGSIWGGIPGYLKAKVGTNEVINTIMMNYLGLYLGNYIILRSR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCHHHEEHH
FAVKSSASTPIIQKSAQLLRFSSTSRASISLIIGIVFAIFVYWLLWKTTVGYEIRAVGFN
HHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
PSGAEYGGINVAKNTILAMVLSGAIAGIGGATHVAGVMHQAQDMMALPGFGFDGIAVALL
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEE
AKNNPIGCIASAILFGALNSSSKILQLNGIPKQIVYLVQSIIIIFVATDYIVKYFSEKKS
ECCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RKVLING
CEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]