| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756030
Identifier: 170756030
GI number: 170756030
Start: 15462
End: 16625
Strand: Direct
Name: 170756030
Synonym: CLD_0810
Alternate gene names: NA
Gene position: 15462-16625 (Clockwise)
Preceding gene: 170754952
Following gene: 170756130
Centisome position: 0.39
GC content: 29.3
Gene sequence:
>1164_bases ATGGATAAAGTAGCCCTTTTAAAATGTGATGAATATGATTTAGAAAAGGTAGAAAAAACTATAAGAAATGGATTTGAACT TTTAGGAGGAAACTCTTTTTTGAATAAACTTATACCTTATAATAGTAAAGTTCTTTTAAAACCTAACATGCTTAGTATTG AAAATGAAGGTTCTCCTGTGGTAACTAATAGTGTAGTTTTTGAAGCAGTAATAAGAATATTAAGAGATTATTCTAATAAC ATATCTTTTGGAGATTCTCCTGGATTTGGAGATTCTAAAAAGGCAGCTGAAAAATCTGGATTACTTAATATAGCAAAGAA ATATAATATAGAATTTAAAGATTTTAAAGAATCTATTAATGTAAGTTGTGATAATTCTATTTTATGCAGATCCTGGACTG TAGCGAAGGCAGCTTATGAAACAGATGTACTAATAACATTACCTAAATTAAAGACACATGCTATGGCTTACTTTACAGGT GCAGTTAAGAATCAGTTTGGATGTATACCAGGAACTTTAAAAGCTACTTGGCATACAAGAATGCCTAATGCAAATAATTT CTGTAAAATGTTATTAGATCTAAATACATTGTTAGAAACTGATTTTGCTATACTAGATGGCATTATAGCTATGGAAGGAA ATGGTCCTAAAAATGGAACTCCTTATAATCTTAATACAATTATAATGGGGGATAGCCTTACAGCGGTAGATTCCGTTGCT GTTAAAATAATAGGATATGACAATCCATTAGATATACCTGTATTAAAAGAAGCTTATGATAGCAATTGGGGAAGTGTTTT TTTAAAGGACATAGATATATTAGGTGAAAAAATAGATAGCATGGTCGTAGATAATTTTAAACTTTGTAGAGAAGGTGGGG ATTTTTATTTTATAAATCCTAAAGTTACAAATTTTTTAAAGGATATTATTGCACCAGATCCTACTTTAATAAAAGAAAAG TGTATAGGATGTAATAGATGTGCTGAAGTATGCCCTGAAAAACCATATGTTATAAATATGATAGAAAAAGGGGGTAAAAA AATACCAGTTTGGAATATGAAAAAATGTATAAGATGTTTTTGTTGTCAGGAACTTTGTCCCAAAGGAGCTATAGAAACTA AATATTCTTTTATTGGAAGATTTTTAAATAGAGATGGCAGGTGA
Upstream 100 bases:
>100_bases ATTCATTTGCATACAATATCTTCAGATAATGAAGATATAATGAATAAAATAATAGAAGAATTAAACCAAAAAAATTATTT AGTAGATGAGGAAGTATAAA
Downstream 100 bases:
>100_bases TAAAATGAAAAATAAAAAAGCATTGTTTATACCATTATTCATAATAATTTTATTTATAGCATTTTTTAATAAAATAATAA ATTTTATTATTAATATAAAA
Product: iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MDKVALLKCDEYDLEKVEKTIRNGFELLGGNSFLNKLIPYNSKVLLKPNMLSIENEGSPVVTNSVVFEAVIRILRDYSNN ISFGDSPGFGDSKKAAEKSGLLNIAKKYNIEFKDFKESINVSCDNSILCRSWTVAKAAYETDVLITLPKLKTHAMAYFTG AVKNQFGCIPGTLKATWHTRMPNANNFCKMLLDLNTLLETDFAILDGIIAMEGNGPKNGTPYNLNTIIMGDSLTAVDSVA VKIIGYDNPLDIPVLKEAYDSNWGSVFLKDIDILGEKIDSMVVDNFKLCREGGDFYFINPKVTNFLKDIIAPDPTLIKEK CIGCNRCAEVCPEKPYVINMIEKGGKKIPVWNMKKCIRCFCCQELCPKGAIETKYSFIGRFLNRDGR
Sequences:
>Translated_387_residues MDKVALLKCDEYDLEKVEKTIRNGFELLGGNSFLNKLIPYNSKVLLKPNMLSIENEGSPVVTNSVVFEAVIRILRDYSNN ISFGDSPGFGDSKKAAEKSGLLNIAKKYNIEFKDFKESINVSCDNSILCRSWTVAKAAYETDVLITLPKLKTHAMAYFTG AVKNQFGCIPGTLKATWHTRMPNANNFCKMLLDLNTLLETDFAILDGIIAMEGNGPKNGTPYNLNTIIMGDSLTAVDSVA VKIIGYDNPLDIPVLKEAYDSNWGSVFLKDIDILGEKIDSMVVDNFKLCREGGDFYFINPKVTNFLKDIIAPDPTLIKEK CIGCNRCAEVCPEKPYVINMIEKGGKKIPVWNMKKCIRCFCCQELCPKGAIETKYSFIGRFLNRDGR >Mature_387_residues MDKVALLKCDEYDLEKVEKTIRNGFELLGGNSFLNKLIPYNSKVLLKPNMLSIENEGSPVVTNSVVFEAVIRILRDYSNN ISFGDSPGFGDSKKAAEKSGLLNIAKKYNIEFKDFKESINVSCDNSILCRSWTVAKAAYETDVLITLPKLKTHAMAYFTG AVKNQFGCIPGTLKATWHTRMPNANNFCKMLLDLNTLLETDFAILDGIIAMEGNGPKNGTPYNLNTIIMGDSLTAVDSVA VKIIGYDNPLDIPVLKEAYDSNWGSVFLKDIDILGEKIDSMVVDNFKLCREGGDFYFINPKVTNFLKDIIAPDPTLIKEK CIGCNRCAEVCPEKPYVINMIEKGGKKIPVWNMKKCIRCFCCQELCPKGAIETKYSFIGRFLNRDGR
Specific function: Unknown
COG id: COG2006
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007160 [H]
Pfam domain/function: PF04015 DUF362 [H]
EC number: NA
Molecular weight: Translated: 43182; Mature: 43182
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKVALLKCDEYDLEKVEKTIRNGFELLGGNSFLNKLIPYNSKVLLKPNMLSIENEGSPV CCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECCCEEEECCCCCCE VTNSVVFEAVIRILRDYSNNISFGDSPGFGDSKKAAEKSGLLNIAKKYNIEFKDFKESIN EEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHCCCCHHHHHHHCC VSCDNSILCRSWTVAKAAYETDVLITLPKLKTHAMAYFTGAVKNQFGCIPGTLKATWHTR CCCCCCEEECCCHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC MPNANNFCKMLLDLNTLLETDFAILDGIIAMEGNGPKNGTPYNLNTIIMGDSLTAVDSVA CCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEEECCCCHHHHHEE VKIIGYDNPLDIPVLKEAYDSNWGSVFLKDIDILGEKIDSMVVDNFKLCREGGDFYFINP EEEEECCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECH KVTNFLKDIIAPDPTLIKEKCIGCNRCAEVCPEKPYVINMIEKGGKKIPVWNMKKCIRCF HHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCCCCEEEEHHHCCCCCCCCCCHHHHHHHH CCQELCPKGAIETKYSFIGRFLNRDGR HHHHHCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MDKVALLKCDEYDLEKVEKTIRNGFELLGGNSFLNKLIPYNSKVLLKPNMLSIENEGSPV CCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECCCEEEECCCCCCE VTNSVVFEAVIRILRDYSNNISFGDSPGFGDSKKAAEKSGLLNIAKKYNIEFKDFKESIN EEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHCCCCHHHHHHHCC VSCDNSILCRSWTVAKAAYETDVLITLPKLKTHAMAYFTGAVKNQFGCIPGTLKATWHTR CCCCCCEEECCCHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC MPNANNFCKMLLDLNTLLETDFAILDGIIAMEGNGPKNGTPYNLNTIIMGDSLTAVDSVA CCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEEECCCCHHHHHEE VKIIGYDNPLDIPVLKEAYDSNWGSVFLKDIDILGEKIDSMVVDNFKLCREGGDFYFINP EEEEECCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECH KVTNFLKDIIAPDPTLIKEKCIGCNRCAEVCPEKPYVINMIEKGGKKIPVWNMKKCIRCF HHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCCCCEEEEHHHCCCCCCCCCCHHHHHHHH CCQELCPKGAIETKYSFIGRFLNRDGR HHHHHCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]