| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755964
Identifier: 170755964
GI number: 170755964
Start: 1910461
End: 1910934
Strand: Reverse
Name: 170755964
Synonym: CLD_2846
Alternate gene names: NA
Gene position: 1910934-1910461 (Counterclockwise)
Preceding gene: 170754959
Following gene: 170754345
Centisome position: 48.28
GC content: 28.9
Gene sequence:
>474_bases ATGAATAGAGAAACTTGTATTTTTAATTATACTAAAAAATGTACTGACTGTGGGGAATGTGAAATTTGTGATTTAGACCA AAATAAAAAATGTGATAATTGCGGAGAATGCTTGCAAAGAGAAGGAATAGATACTCAAGCTATAAAGATATATGAAATAA AAGAGGATAAAAATTTCGTAGATAAAGAAGACTTAAAAAAGGTACTGAAAGAAGATGAAAAGGAGTTAGAATCCTTGAAA GAATTTGAAGAAGATCTAGAAAATGAAATTCTACAGGAGACACAATTACTAAAAGACTATGATGAAAACTTTAAAGAGCA GGGACTATATGCCATAGAGAATGTAGAAGGGGTACAAATAGAATATATAGAAGATGTAGATGGATTAAGTGAGCTGATGG AAGATGAATCTAGATTAAAAAAAGTAGCTTATGAAGAATTTCCAGGACTTATAAAAATAAGAGAAAATAAATAG
Upstream 100 bases:
>100_bases CTATTACGAGGAATAATTTTTAACTATAATAATACTTAACTAATACAATAAATTTACAATTTGTAATAAGATACCATAGA GAAAGGTAGAGTGTAAATAT
Downstream 100 bases:
>100_bases TTACTTAAATAACTTTTTACACAACAACAAAAGATAGGGTATTAGAACCTAAAAATTTGATATAAATCAAGCACTTTAAA ATCCTACATACAGTATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MNRETCIFNYTKKCTDCGECEICDLDQNKKCDNCGECLQREGIDTQAIKIYEIKEDKNFVDKEDLKKVLKEDEKELESLK EFEEDLENEILQETQLLKDYDENFKEQGLYAIENVEGVQIEYIEDVDGLSELMEDESRLKKVAYEEFPGLIKIRENK
Sequences:
>Translated_157_residues MNRETCIFNYTKKCTDCGECEICDLDQNKKCDNCGECLQREGIDTQAIKIYEIKEDKNFVDKEDLKKVLKEDEKELESLK EFEEDLENEILQETQLLKDYDENFKEQGLYAIENVEGVQIEYIEDVDGLSELMEDESRLKKVAYEEFPGLIKIRENK >Mature_157_residues MNRETCIFNYTKKCTDCGECEICDLDQNKKCDNCGECLQREGIDTQAIKIYEIKEDKNFVDKEDLKKVLKEDEKELESLK EFEEDLENEILQETQLLKDYDENFKEQGLYAIENVEGVQIEYIEDVDGLSELMEDESRLKKVAYEEFPGLIKIRENK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18531; Mature: 18531
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRETCIFNYTKKCTDCGECEICDLDQNKKCDNCGECLQREGIDTQAIKIYEIKEDKNFV CCCCCEEEECCHHCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCC DKEDLKKVLKEDEKELESLKEFEEDLENEILQETQLLKDYDENFKEQGLYAIENVEGVQI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEE EYIEDVDGLSELMEDESRLKKVAYEEFPGLIKIRENK EHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC >Mature Secondary Structure MNRETCIFNYTKKCTDCGECEICDLDQNKKCDNCGECLQREGIDTQAIKIYEIKEDKNFV CCCCCEEEECCHHCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCC DKEDLKKVLKEDEKELESLKEFEEDLENEILQETQLLKDYDENFKEQGLYAIENVEGVQI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEE EYIEDVDGLSELMEDESRLKKVAYEEFPGLIKIRENK EHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA