| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755961
Identifier: 170755961
GI number: 170755961
Start: 2463700
End: 2464281
Strand: Reverse
Name: 170755961
Synonym: CLD_2305
Alternate gene names: NA
Gene position: 2464281-2463700 (Counterclockwise)
Preceding gene: 170756147
Following gene: 170754993
Centisome position: 62.26
GC content: 32.99
Gene sequence:
>582_bases ATGAAATATTGTATTCTTATGGGAAGCCCACGTAAAAATGGAAATACGTTTAAATTATTAAAGCCGTTTATTGAAGAACT TGAACTTCAACAAGTTCAGTATGATTTGATTTGGCTTTATGATAAACATATTGAACCTTGCACAGCTTGTCGAAACTGTC AAAAAGACTGGACAATTTTTGGATGTCTATATTCCGATGATGTTCAGGAAATTTTTGATAAAGTATATGACAGTGATGTC ATTATTTTAGCTACACCTATTTATTCATGGTACTGTACACCACCTATGAAATCACTGTTAGACCGCTTGGTGTATGGAAT GAATAAGTATTATGGTGATGAAAAAGGGCCTTCTCTTTGGAGTGGCAAAAAATTAGCTATCATAACTACTTGTGGCTATA GACCAGAAAATGGAGCTGATTTATTTGAGGAAGGCATAAAACGGTATTGCAAACATTCTAAATTAAAATATATTGGAATG CTCGCTGAAAGAGACTTTGGGTATAAATCTGTCTTTATAACAGATGATAAGAGTGAGCATTCAAGGTCATTTGCTCGAAA ACTAATAAGCAATAAAGTATAA
Upstream 100 bases:
>100_bases GATATTGTGACCTATTGCACTCTTCTTATTTTTAATGTAAGTATTATTTTAAGAGGTAAGTATTTTTCATTGGGTATTTA TCAACAAATGGAGGTGTAAA
Downstream 100 bases:
>100_bases TCTGACATACTTTTTGATTTATAATCTTCTTGTAACGTGTAACAATTATATAATTACATTAGACCGTATTATTCAATATG AATATGCGGTATTTTTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: Isf-2; MCJ-2; Mj2 [H]
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MKYCILMGSPRKNGNTFKLLKPFIEELELQQVQYDLIWLYDKHIEPCTACRNCQKDWTIFGCLYSDDVQEIFDKVYDSDV IILATPIYSWYCTPPMKSLLDRLVYGMNKYYGDEKGPSLWSGKKLAIITTCGYRPENGADLFEEGIKRYCKHSKLKYIGM LAERDFGYKSVFITDDKSEHSRSFARKLISNKV
Sequences:
>Translated_193_residues MKYCILMGSPRKNGNTFKLLKPFIEELELQQVQYDLIWLYDKHIEPCTACRNCQKDWTIFGCLYSDDVQEIFDKVYDSDV IILATPIYSWYCTPPMKSLLDRLVYGMNKYYGDEKGPSLWSGKKLAIITTCGYRPENGADLFEEGIKRYCKHSKLKYIGM LAERDFGYKSVFITDDKSEHSRSFARKLISNKV >Mature_193_residues MKYCILMGSPRKNGNTFKLLKPFIEELELQQVQYDLIWLYDKHIEPCTACRNCQKDWTIFGCLYSDDVQEIFDKVYDSDV IILATPIYSWYCTPPMKSLLDRLVYGMNKYYGDEKGPSLWSGKKLAIITTCGYRPENGADLFEEGIKRYCKHSKLKYIGM LAERDFGYKSVFITDDKSEHSRSFARKLISNKV
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 22544; Mature: 22544
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYCILMGSPRKNGNTFKLLKPFIEELELQQVQYDLIWLYDKHIEPCTACRNCQKDWTIF CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHCCCCCCEEE GCLYSDDVQEIFDKVYDSDVIILATPIYSWYCTPPMKSLLDRLVYGMNKYYGDEKGPSLW EEEECHHHHHHHHHHCCCCEEEEEECCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCC SGKKLAIITTCGYRPENGADLFEEGIKRYCKHSKLKYIGMLAERDFGYKSVFITDDKSEH CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCCHH SRSFARKLISNKV HHHHHHHHHHCCC >Mature Secondary Structure MKYCILMGSPRKNGNTFKLLKPFIEELELQQVQYDLIWLYDKHIEPCTACRNCQKDWTIF CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHCCCCCCEEE GCLYSDDVQEIFDKVYDSDVIILATPIYSWYCTPPMKSLLDRLVYGMNKYYGDEKGPSLW EEEECHHHHHHHHHHCCCCEEEEEECCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCC SGKKLAIITTCGYRPENGADLFEEGIKRYCKHSKLKYIGMLAERDFGYKSVFITDDKSEH CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCCHH SRSFARKLISNKV HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]