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The map label for this gene is ygaK [H]

Identifier: 170755946

GI number: 170755946

Start: 341370

End: 342692

Strand: Reverse

Name: ygaK [H]

Synonym: CLD_0486

Alternate gene names: 170755946

Gene position: 342692-341370 (Counterclockwise)

Preceding gene: 170757634

Following gene: 170755511

Centisome position: 8.66

GC content: 28.42

Gene sequence:

>1323_bases
TTGATCGAAGTGATTACTCCTACAAGTAATTATTATGACGATGCCAGGCAAGTCTGGAATAGAGCTATTGATAAATATCC
AGCTGCCATAGCCTATTGCAAAACTTATGAAGATATAAAAAAAGCTATATTATTTGCTAGAAAAAATAATTTTAAAATAA
GAGTTCGCTGTGGTGGTCATAATTATGAAGGTTTTTCAATAGCTGATGATGCTTTAATTATTGATATTAGCAATTTAAAT
AAAATAGAAATAAACTATGAATGCAATACTGTTACTGTTCAAAGTGGAGCTTTTTTAGGACAAGTTTATAATTTTCTTGG
AGCAAGTGAATATCCATTTCCAGGTGGTTCATGCCCTACTGTTGGAATTAGTGGTGTAGTACTTGGAGGTGGATGGGGAT
ATTCATCTAGATATTTTGGCTTAACTTGTGATAGCTTACTTGAACTCAAGATGATTGATTATAGAGGTTGTTTATTAACT
GCAAATAAGAATATTAATTCTGATTTATATTGGGCATGTAAAGGTGGTGGCGGTGGAAATTTTGGTATAGTAGTATCAAT
GACATTTGAACTTCCTCCTAAGGTAGATAAAGTAACTGTCTTTAATATTTACTATACTAATCCAAGTAAAGATACTCAAC
TTAAATTTCTAGATACTTGGCAGAATTGGATTACTACAACTTCTAATAAAATTAATATGAAAGGTAGTATAGTCAACTCA
GAGACTGATGGTGTAAATATTATTTGTACAGGCCTTCTTTATGGTACACCTAAAGAATTATATAAACTCTTAGTCCCTTT
TAGTAAAATTCAAGGCTACAAATTAAGTTATAGATATACTTCTTTTTTACAAGCTGCCGAAATTATAGCCTCTGTATATC
CTCCATATGAATACTTTATATCTTATGGTAGATTCGTATCAGAAACCTATTCTTATGAAACATTAAAAAACCTAATTAAT
ATAATTAATGAAGAAAGACCTAATGGCTCTACTACTACCGAATTAAATGTGTATGGACTTGGTGGACAAGTTAGCAAAAT
TAATAAAAAAGATACTGCTTTTTATTATAGAAATAGTAATTATATAATATTACTGGAAACTGATTTTAGAAATAATTTAT
ATAAACAAGATAATATTAATTGGATAAATGGAAATTCTGAATATATTTATAATATTACTAGTGGTTCTTATATTAATTTC
CCTTATTACCCTTTACCAAATTATCTTTATGATTATTATGGTGGGAATGTTCAAAGACTTAAATGTATAAAATTTAAATA
CGGTCCTCTTAATGTATTTAATTTTCCACAAAGTATTAAATAA

Upstream 100 bases:

>100_bases
TTTTTCTAATGAAAATTTTGTTATAATATAAGTTTTATCACCTTTTCACTCTCACCTTTATAAGATAAATTAAAAACTAT
TTTTAAAGCTGGTGATAAAA

Downstream 100 bases:

>100_bases
ATGCCTTATATATTTTTATGAAAAATAGTAATTCCATGTACAATTGCAACAGGTCCATTTTTGTTATACAAAATGGACCT
TCTCAAATTTCTCTTTAATA

Product: putative oxidoreductase, FAD-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MIEVITPTSNYYDDARQVWNRAIDKYPAAIAYCKTYEDIKKAILFARKNNFKIRVRCGGHNYEGFSIADDALIIDISNLN
KIEINYECNTVTVQSGAFLGQVYNFLGASEYPFPGGSCPTVGISGVVLGGGWGYSSRYFGLTCDSLLELKMIDYRGCLLT
ANKNINSDLYWACKGGGGGNFGIVVSMTFELPPKVDKVTVFNIYYTNPSKDTQLKFLDTWQNWITTTSNKINMKGSIVNS
ETDGVNIICTGLLYGTPKELYKLLVPFSKIQGYKLSYRYTSFLQAAEIIASVYPPYEYFISYGRFVSETYSYETLKNLIN
IINEERPNGSTTTELNVYGLGGQVSKINKKDTAFYYRNSNYIILLETDFRNNLYKQDNINWINGNSEYIYNITSGSYINF
PYYPLPNYLYDYYGGNVQRLKCIKFKYGPLNVFNFPQSIK

Sequences:

>Translated_440_residues
MIEVITPTSNYYDDARQVWNRAIDKYPAAIAYCKTYEDIKKAILFARKNNFKIRVRCGGHNYEGFSIADDALIIDISNLN
KIEINYECNTVTVQSGAFLGQVYNFLGASEYPFPGGSCPTVGISGVVLGGGWGYSSRYFGLTCDSLLELKMIDYRGCLLT
ANKNINSDLYWACKGGGGGNFGIVVSMTFELPPKVDKVTVFNIYYTNPSKDTQLKFLDTWQNWITTTSNKINMKGSIVNS
ETDGVNIICTGLLYGTPKELYKLLVPFSKIQGYKLSYRYTSFLQAAEIIASVYPPYEYFISYGRFVSETYSYETLKNLIN
IINEERPNGSTTTELNVYGLGGQVSKINKKDTAFYYRNSNYIILLETDFRNNLYKQDNINWINGNSEYIYNITSGSYINF
PYYPLPNYLYDYYGGNVQRLKCIKFKYGPLNVFNFPQSIK
>Mature_440_residues
MIEVITPTSNYYDDARQVWNRAIDKYPAAIAYCKTYEDIKKAILFARKNNFKIRVRCGGHNYEGFSIADDALIIDISNLN
KIEINYECNTVTVQSGAFLGQVYNFLGASEYPFPGGSCPTVGISGVVLGGGWGYSSRYFGLTCDSLLELKMIDYRGCLLT
ANKNINSDLYWACKGGGGGNFGIVVSMTFELPPKVDKVTVFNIYYTNPSKDTQLKFLDTWQNWITTTSNKINMKGSIVNS
ETDGVNIICTGLLYGTPKELYKLLVPFSKIQGYKLSYRYTSFLQAAEIIASVYPPYEYFISYGRFVSETYSYETLKNLIN
IINEERPNGSTTTELNVYGLGGQVSKINKKDTAFYYRNSNYIILLETDFRNNLYKQDNINWINGNSEYIYNITSGSYINF
PYYPLPNYLYDYYGGNVQRLKCIKFKYGPLNVFNFPQSIK

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094 [H]

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50031; Mature: 50031

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVITPTSNYYDDARQVWNRAIDKYPAAIAYCKTYEDIKKAILFARKNNFKIRVRCGGH
CEEEECCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHEEEEECCCEEEEEEECCC
NYEGFSIADDALIIDISNLNKIEINYECNTVTVQSGAFLGQVYNFLGASEYPFPGGSCPT
CCCCCEEECCEEEEEECCCEEEEEEEEECEEEEECCHHHHHHHHHHCCCCCCCCCCCCCC
VGISGVVLGGGWGYSSRYFGLTCDSLLELKMIDYRGCLLTANKNINSDLYWACKGGGGGN
CCCCEEEEECCCCCCCEEECCCHHHHHEEEEEEECCEEEEECCCCCCCEEEEEECCCCCC
FGIVVSMTFELPPKVDKVTVFNIYYTNPSKDTQLKFLDTWQNWITTTSNKINMKGSIVNS
EEEEEEEEEECCCCCCEEEEEEEEEECCCCCCEEEEEEHHHHHHCCCCCEEEEEEEEECC
ETDGVNIICTGLLYGTPKELYKLLVPFSKIQGYKLSYRYTSFLQAAEIIASVYPPYEYFI
CCCCEEEEEEEEECCCHHHHHHHHCCHHHCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHH
SYGRFVSETYSYETLKNLINIINEERPNGSTTTELNVYGLGGQVSKINKKDTAFYYRNSN
HHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEEECCCCCCEEEEECCC
YIILLETDFRNNLYKQDNINWINGNSEYIYNITSGSYINFPYYPLPNYLYDYYGGNVQRL
EEEEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCEEECCCCCCCHHHHHHHCCCEEEE
KCIKFKYGPLNVFNFPQSIK
EEEEEECCCCEEECCCCCCC
>Mature Secondary Structure
MIEVITPTSNYYDDARQVWNRAIDKYPAAIAYCKTYEDIKKAILFARKNNFKIRVRCGGH
CEEEECCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHEEEEECCCEEEEEEECCC
NYEGFSIADDALIIDISNLNKIEINYECNTVTVQSGAFLGQVYNFLGASEYPFPGGSCPT
CCCCCEEECCEEEEEECCCEEEEEEEEECEEEEECCHHHHHHHHHHCCCCCCCCCCCCCC
VGISGVVLGGGWGYSSRYFGLTCDSLLELKMIDYRGCLLTANKNINSDLYWACKGGGGGN
CCCCEEEEECCCCCCCEEECCCHHHHHEEEEEEECCEEEEECCCCCCCEEEEEECCCCCC
FGIVVSMTFELPPKVDKVTVFNIYYTNPSKDTQLKFLDTWQNWITTTSNKINMKGSIVNS
EEEEEEEEEECCCCCCEEEEEEEEEECCCCCCEEEEEEHHHHHHCCCCCEEEEEEEEECC
ETDGVNIICTGLLYGTPKELYKLLVPFSKIQGYKLSYRYTSFLQAAEIIASVYPPYEYFI
CCCCEEEEEEEEECCCHHHHHHHHCCHHHCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHH
SYGRFVSETYSYETLKNLINIINEERPNGSTTTELNVYGLGGQVSKINKKDTAFYYRNSN
HHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEEECCCCCCEEEEECCC
YIILLETDFRNNLYKQDNINWINGNSEYIYNITSGSYINFPYYPLPNYLYDYYGGNVQRL
EEEEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCEEECCCCCCCHHHHHHHCCCEEEE
KCIKFKYGPLNVFNFPQSIK
EEEEEECCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]