| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is ywrA [H]
Identifier: 170755932
GI number: 170755932
Start: 657927
End: 658463
Strand: Reverse
Name: ywrA [H]
Synonym: CLD_0215
Alternate gene names: 170755932
Gene position: 658463-657927 (Counterclockwise)
Preceding gene: 170756133
Following gene: 170756764
Centisome position: 16.64
GC content: 29.05
Gene sequence:
>537_bases ATGCTTAAATATCTAAAAATGTTTTGGAGTTTCTTTAAAATAGGTGCCTTTACCTTTGGCGGAGGCTATGCAATGATTCC ACTTATAGAGGAAGAGGTTGTAAATAAAAACTCTTGGATATCTAAAGAAGACTTCTTAGATATACTTGTAATATCCCAAT CCTTTCCTGGTGCTTTAGCCGTAAATTGTTCTACTTTTATCGGATATAAAGTAAGTAATTTACCTGGAGCTATACTTGCT CTTTTAGGAACCATATTACCATCCTTCTTTATAATATTATGTATTGCAAGCTTTTTTATGCAATTTAGAAATAATTATTA TGTAGATTTAATATTCAAAGGGATAAATGGAGCCGTTCCTGTACTAGTGCTAGTAGCCGTAATAAGCCTTTCTAAATCTA TAAAAAAAAATTACATTAATTATACCATAATTATATTAACAGTGGTACTTTTAAAATTTTTTAATATGCACCCTGTTATA ATTATACTTCTTTCTGGAATATATGGTTATATTTTTCTTAGAAAGAAGGTGGAGTAA
Upstream 100 bases:
>100_bases ATCTATCATTTACCTACTTTATTTATATTATTCTATTAGAAAATATAGTATTCATAGGTTATAATTAATTTATCTTTTAT TTTTTTATGAGGTGATATTA
Downstream 100 bases:
>100_bases TGAAAGCATTACTAGAATTATTTTTTTCTTTCTTAAAAATAGGTATGTTTAGTTTTGGTGGTGGTTATGCTATGCTTCCA CTTATAGAAAGAGAGATTGT
Product: chromate transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MLKYLKMFWSFFKIGAFTFGGGYAMIPLIEEEVVNKNSWISKEDFLDILVISQSFPGALAVNCSTFIGYKVSNLPGAILA LLGTILPSFFIILCIASFFMQFRNNYYVDLIFKGINGAVPVLVLVAVISLSKSIKKNYINYTIIILTVVLLKFFNMHPVI IILLSGIYGYIFLRKKVE
Sequences:
>Translated_178_residues MLKYLKMFWSFFKIGAFTFGGGYAMIPLIEEEVVNKNSWISKEDFLDILVISQSFPGALAVNCSTFIGYKVSNLPGAILA LLGTILPSFFIILCIASFFMQFRNNYYVDLIFKGINGAVPVLVLVAVISLSKSIKKNYINYTIIILTVVLLKFFNMHPVI IILLSGIYGYIFLRKKVE >Mature_178_residues MLKYLKMFWSFFKIGAFTFGGGYAMIPLIEEEVVNKNSWISKEDFLDILVISQSFPGALAVNCSTFIGYKVSNLPGAILA LLGTILPSFFIILCIASFFMQFRNNYYVDLIFKGINGAVPVLVLVAVISLSKSIKKNYINYTIIILTVVLLKFFNMHPVI IILLSGIYGYIFLRKKVE
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 20078; Mature: 20078
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKYLKMFWSFFKIGAFTFGGGYAMIPLIEEEVVNKNSWISKEDFLDILVISQSFPGALA CHHHHHHHHHHHHHHCEEECCCEEEHHHHHHHHCCCCCCCCHHHHHHHEEECCCCCCEEE VNCSTFIGYKVSNLPGAILALLGTILPSFFIILCIASFFMQFRNNYYVDLIFKGINGAVP EEHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHH VLVLVAVISLSKSIKKNYINYTIIILTVVLLKFFNMHPVIIILLSGIYGYIFLRKKVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLKYLKMFWSFFKIGAFTFGGGYAMIPLIEEEVVNKNSWISKEDFLDILVISQSFPGALA CHHHHHHHHHHHHHHCEEECCCEEEHHHHHHHHCCCCCCCCHHHHHHHEEECCCCCCEEE VNCSTFIGYKVSNLPGAILALLGTILPSFFIILCIASFFMQFRNNYYVDLIFKGINGAVP EEHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHH VLVLVAVISLSKSIKKNYINYTIIILTVVLLKFFNMHPVIIILLSGIYGYIFLRKKVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]