| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is leuS
Identifier: 170755878
GI number: 170755878
Start: 224418
End: 226859
Strand: Reverse
Name: leuS
Synonym: CLD_0594
Alternate gene names: 170755878
Gene position: 226859-224418 (Counterclockwise)
Preceding gene: 170756429
Following gene: 170754361
Centisome position: 5.73
GC content: 31.16
Gene sequence:
>2442_bases ATGGGAAACTATAGTACTAAAATCGACGAGAAATGGCAAAAAAAATGGGAAGAAAACTCTCTATACAAATTTAATAATAA AAATTTAGATAAAAAATTATATGTACTTGAAATGTTTTCTTATCCATCAGGTAGTAAATTACATGCAGGACACTGGTTTA ACTATGGACCTGTAGACTCTTGGGCAAGATTTAAAAGAATGCAAGGTTACAATGTTTTTCAACCTATGGGGTTTGATGCT TTTGGTCTTCCAGCTGAAAACTATGCAATAAAAACTGGTATACATCCAAAGGATTCTACCTTTAAAAATATTGAAACTAT GGAAACTCAATTAAAAGCCATGGGTGCCATGTTCAACTGGGAAAATGAAGTTATAACTTGTTCACCAGACTACTATAAAT GGACTCAATGGTTATTTTTAAAACTTTACGAAAAAGGTTTAGCTTATAAAAAGAAAGCACCTGTAAATTGGTGCCCAAGT TGTAATACTGTTCTTGCTAATGAACAGGTTTTAGATGGAAAATGTGAAAGATGTGATAGCAATGTTGATAAAAAAAATCT AGAGCAATGGTTCTTAAAGATAACTGACTATGCTGATGAATTATTAGAAAAACTCGATGAATTAGATTGGCCTGAAAAAA CTAAGGCTATGCAAAAACACTGGATTGGAAAATCTGTAGGTGCTGAAGTTACATTTAATGTAGCAGATTCAGACTTGAGC TTTAATGTATTTACTACAAGGGTAGATACTTTATTTGGAGTTACTTATGTAGTTTTAGCTCCTGAAAATGATTTAGTAGA TAAGCTAACTACTCCTGAAAACAAAGCTGAAGTTGAATCATATAAAACTCAAGCTAAAAATCAATCTGATATAGAAAGAC AATCTATAACTCGAGAAAAAACTGGTGTATTCTCAGGCTCTTATGCCATAAATCCTATAAACGGTAAAGAAGTACCTATA TGGATAGGAGATTATGTATTAAATACCTATGGAACAGGTTGTGTAATGGCAGTTCCTGCCCATGATGAAAGAGATTTCGC TTTTGCTACTAAATATAACCTTCCTATAGAAAGAGTTATAGAAGGCGGTGATTCTCTCCCTTATACAGAATATGGCAAAA TGGTTAATAGTGGAGAATTCGATGGTTTATTTGGAAATAAAGCTAAAGAAGCTGTAATTTCTAAGTTAGAGTCTATGAAT CTTGGTAGAAAGAAAATAAATTATAGATTAAGAGATTGGCTTGTATCAAGACAAAGATATTGGGGGGCACCTATTCCTAT AATTTATTGTGAAAAATGTGGTACAGTAGAAGTTCCTATAGAACAGCTTCCTGTAGAACTACCATATAATGTAGAATTCT CTCCAGATGGGAAATCACCTTTAGGTAAATGTGATGACTTTATAAATACAACTTGCCCAAAATGTGGTGGTCCAGCAAAA AGAGAAGCAGACACATTAGATACCTTTGTATGTTCTTCTTGGTACTATTTAAGATATCCAGATAATAATAACGAAAAAGA TGCTTTTAATCCTGAATTAATAAATAAAATGCTTCCAGTTGATAAATATGTTGGCGGTCCTGAACACGCTTGTATGCATC TTTTATATGCTAGATTTATAACTAAAGCTTTAAGAGATATGGGGTATCTAAACTTTGATGAACCATTCTTATCTCTTACT CATCAAGGATTAATATTAGGACCTGATGGCTTAAAAATGAGTAAATCAAAAGGAAATACTATATCTCCTGATGATTATAT AAAAGAATTCGGTGCAGATGTATTTAGAATGTATTTAATGTTTGGATTTGATTATACAGAAGGCGGCGCTTGGAGTGACG ATGCTATAAAATCCATAGGTAAATTTGTAGACAGAGTAGAAAGAATATTAGAAAATGCTAGAGAAGAAATAAAAAATTCT AAAGATAATAAATCTACTATGGATAAAGATGAGAAAGAATTAAACTACGTAAGGCATCATAGCATTAAATCTATAACTGA AGATATAGATAAAATGCAGTTCAATACTTCCATAGCAAGATTAATGGAATTTACAAATGCTCTATCTAAATATCTTGGTA GTGATACTCTTAGGAATGCTTCATTCTTGAGAGAAAGTATAATTGACTTTATAACATTATTAGCACCTTTTGCTCCTCAT TTTGCTGAAGAACAATGGGAACTTATAGGCATTAATTCTTCCATTTTCAATGAAAAATGGCCTGAATTTGACCCTAAAGC CCTAATAAAAGATGAAGTTGAAATAGCCGTACAAGTAAATGGAAAAATAAGAGCTAAAATAAATATATCTACTAGTTCAT CAGAAGATGAAATAAAAGAATCAGCATTAAACAATGATGATATTAAAAATTCTATAGGCGATAAAGAGATTAAAAAAGTT ATAGTAATAAAAAATAGATTAGTTAATATAGTTGCTAAATAA
Upstream 100 bases:
>100_bases TTAGGAGATGAAGGTTTTTTTATTTTATATAAAAATATTTAATTATTATTTTAAATTTTATTTATAAATAATAGTTAATG AAATAGATAGGAGGATTTTT
Downstream 100 bases:
>100_bases AATTAAAAAGGCTGTCTGAAGATAAAAATAGATTTAATTTTAACCCGTAAATATAGAAAATACATTTATAAGGCACTTCA TTTTGCTAAGAAGTTCTAAA
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 813; Mature: 812
Protein sequence:
>813_residues MGNYSTKIDEKWQKKWEENSLYKFNNKNLDKKLYVLEMFSYPSGSKLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDA FGLPAENYAIKTGIHPKDSTFKNIETMETQLKAMGAMFNWENEVITCSPDYYKWTQWLFLKLYEKGLAYKKKAPVNWCPS CNTVLANEQVLDGKCERCDSNVDKKNLEQWFLKITDYADELLEKLDELDWPEKTKAMQKHWIGKSVGAEVTFNVADSDLS FNVFTTRVDTLFGVTYVVLAPENDLVDKLTTPENKAEVESYKTQAKNQSDIERQSITREKTGVFSGSYAINPINGKEVPI WIGDYVLNTYGTGCVMAVPAHDERDFAFATKYNLPIERVIEGGDSLPYTEYGKMVNSGEFDGLFGNKAKEAVISKLESMN LGRKKINYRLRDWLVSRQRYWGAPIPIIYCEKCGTVEVPIEQLPVELPYNVEFSPDGKSPLGKCDDFINTTCPKCGGPAK READTLDTFVCSSWYYLRYPDNNNEKDAFNPELINKMLPVDKYVGGPEHACMHLLYARFITKALRDMGYLNFDEPFLSLT HQGLILGPDGLKMSKSKGNTISPDDYIKEFGADVFRMYLMFGFDYTEGGAWSDDAIKSIGKFVDRVERILENAREEIKNS KDNKSTMDKDEKELNYVRHHSIKSITEDIDKMQFNTSIARLMEFTNALSKYLGSDTLRNASFLRESIIDFITLLAPFAPH FAEEQWELIGINSSIFNEKWPEFDPKALIKDEVEIAVQVNGKIRAKINISTSSSEDEIKESALNNDDIKNSIGDKEIKKV IVIKNRLVNIVAK
Sequences:
>Translated_813_residues MGNYSTKIDEKWQKKWEENSLYKFNNKNLDKKLYVLEMFSYPSGSKLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDA FGLPAENYAIKTGIHPKDSTFKNIETMETQLKAMGAMFNWENEVITCSPDYYKWTQWLFLKLYEKGLAYKKKAPVNWCPS CNTVLANEQVLDGKCERCDSNVDKKNLEQWFLKITDYADELLEKLDELDWPEKTKAMQKHWIGKSVGAEVTFNVADSDLS FNVFTTRVDTLFGVTYVVLAPENDLVDKLTTPENKAEVESYKTQAKNQSDIERQSITREKTGVFSGSYAINPINGKEVPI WIGDYVLNTYGTGCVMAVPAHDERDFAFATKYNLPIERVIEGGDSLPYTEYGKMVNSGEFDGLFGNKAKEAVISKLESMN LGRKKINYRLRDWLVSRQRYWGAPIPIIYCEKCGTVEVPIEQLPVELPYNVEFSPDGKSPLGKCDDFINTTCPKCGGPAK READTLDTFVCSSWYYLRYPDNNNEKDAFNPELINKMLPVDKYVGGPEHACMHLLYARFITKALRDMGYLNFDEPFLSLT HQGLILGPDGLKMSKSKGNTISPDDYIKEFGADVFRMYLMFGFDYTEGGAWSDDAIKSIGKFVDRVERILENAREEIKNS KDNKSTMDKDEKELNYVRHHSIKSITEDIDKMQFNTSIARLMEFTNALSKYLGSDTLRNASFLRESIIDFITLLAPFAPH FAEEQWELIGINSSIFNEKWPEFDPKALIKDEVEIAVQVNGKIRAKINISTSSSEDEIKESALNNDDIKNSIGDKEIKKV IVIKNRLVNIVAK >Mature_812_residues GNYSTKIDEKWQKKWEENSLYKFNNKNLDKKLYVLEMFSYPSGSKLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAF GLPAENYAIKTGIHPKDSTFKNIETMETQLKAMGAMFNWENEVITCSPDYYKWTQWLFLKLYEKGLAYKKKAPVNWCPSC NTVLANEQVLDGKCERCDSNVDKKNLEQWFLKITDYADELLEKLDELDWPEKTKAMQKHWIGKSVGAEVTFNVADSDLSF NVFTTRVDTLFGVTYVVLAPENDLVDKLTTPENKAEVESYKTQAKNQSDIERQSITREKTGVFSGSYAINPINGKEVPIW IGDYVLNTYGTGCVMAVPAHDERDFAFATKYNLPIERVIEGGDSLPYTEYGKMVNSGEFDGLFGNKAKEAVISKLESMNL GRKKINYRLRDWLVSRQRYWGAPIPIIYCEKCGTVEVPIEQLPVELPYNVEFSPDGKSPLGKCDDFINTTCPKCGGPAKR EADTLDTFVCSSWYYLRYPDNNNEKDAFNPELINKMLPVDKYVGGPEHACMHLLYARFITKALRDMGYLNFDEPFLSLTH QGLILGPDGLKMSKSKGNTISPDDYIKEFGADVFRMYLMFGFDYTEGGAWSDDAIKSIGKFVDRVERILENAREEIKNSK DNKSTMDKDEKELNYVRHHSIKSITEDIDKMQFNTSIARLMEFTNALSKYLGSDTLRNASFLRESIIDFITLLAPFAPHF AEEQWELIGINSSIFNEKWPEFDPKALIKDEVEIAVQVNGKIRAKINISTSSSEDEIKESALNNDDIKNSIGDKEIKKVI VIKNRLVNIVAK
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=870, Percent_Identity=33.5632183908046, Blast_Score=472, Evalue=1e-133, Organism=Escherichia coli, GI1786861, Length=858, Percent_Identity=40.7925407925408, Blast_Score=648, Evalue=0.0, Organism=Escherichia coli, GI2367096, Length=309, Percent_Identity=26.2135922330097, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI71997510, Length=808, Percent_Identity=29.0841584158416, Blast_Score=313, Evalue=3e-85, Organism=Caenorhabditis elegans, GI71997517, Length=803, Percent_Identity=28.6425902864259, Blast_Score=311, Evalue=7e-85, Organism=Caenorhabditis elegans, GI212645227, Length=323, Percent_Identity=29.1021671826625, Blast_Score=126, Evalue=5e-29, Organism=Saccharomyces cerevisiae, GI6323414, Length=876, Percent_Identity=36.4155251141553, Blast_Score=511, Evalue=1e-145, Organism=Saccharomyces cerevisiae, GI6321531, Length=374, Percent_Identity=23.7967914438503, Blast_Score=87, Evalue=9e-18, Organism=Drosophila melanogaster, GI21355409, Length=859, Percent_Identity=32.8288707799767, Blast_Score=416, Evalue=1e-116,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 93010; Mature: 92879
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNYSTKIDEKWQKKWEENSLYKFNNKNLDKKLYVLEMFSYPSGSKLHAGHWFNYGPVDS CCCCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEECCCCCCCEECCCCCCCCCHHH WARFKRMQGYNVFQPMGFDAFGLPAENYAIKTGIHPKDSTFKNIETMETQLKAMGAMFNW HHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCC ENEVITCSPDYYKWTQWLFLKLYEKGLAYKKKAPVNWCPSCNTVLANEQVLDGKCERCDS CCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHCCHHHHHCC NVDKKNLEQWFLKITDYADELLEKLDELDWPEKTKAMQKHWIGKSVGAEVTFNVADSDLS CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCE FNVFTTRVDTLFGVTYVVLAPENDLVDKLTTPENKAEVESYKTQAKNQSDIERQSITREK EEEHHHHHHHHHCCEEEEECCCCHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH TGVFSGSYAINPINGKEVPIWIGDYVLNTYGTGCVMAVPAHDERDFAFATKYNLPIERVI HCCCCCCEEECCCCCCEEEEEEHHHHHHCCCCCEEEEECCCCCCCEEEEEECCCCHHHHH EGGDSLPYTEYGKMVNSGEFDGLFGNKAKEAVISKLESMNLGRKKINYRLRDWLVSRQRY CCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH WGAPIPIIYCEKCGTVEVPIEQLPVELPYNVEFSPDGKSPLGKCDDFINTTCPKCGGPAK CCCCCCEEEECCCCCEECCHHHCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCCCCCC READTLDTFVCSSWYYLRYPDNNNEKDAFNPELINKMLPVDKYVGGPEHACMHLLYARFI CCHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHCCHHHHCCCHHHHHHHHHHHHHH TKALRDMGYLNFDEPFLSLTHQGLILGPDGLKMSKSKGNTISPDDYIKEFGADVFRMYLM HHHHHHCCCCCCCCHHHHHCCCCEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHH FGFDYTEGGAWSDDAIKSIGKFVDRVERILENAREEIKNSKDNKSTMDKDEKELNYVRHH HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHH SIKSITEDIDKMQFNTSIARLMEFTNALSKYLGSDTLRNASFLRESIIDFITLLAPFAPH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHH FAEEQWELIGINSSIFNEKWPEFDPKALIKDEVEIAVQVNGKIRAKINISTSSSEDEIKE HHCCCEEEEECCHHHHCCCCCCCCCHHHHCCCEEEEEEECCEEEEEEEECCCCCHHHHHH SALNNDDIKNSIGDKEIKKVIVIKNRLVNIVAK HHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GNYSTKIDEKWQKKWEENSLYKFNNKNLDKKLYVLEMFSYPSGSKLHAGHWFNYGPVDS CCCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEECCCCCCCEECCCCCCCCCHHH WARFKRMQGYNVFQPMGFDAFGLPAENYAIKTGIHPKDSTFKNIETMETQLKAMGAMFNW HHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCC ENEVITCSPDYYKWTQWLFLKLYEKGLAYKKKAPVNWCPSCNTVLANEQVLDGKCERCDS CCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHCCHHHHHCC NVDKKNLEQWFLKITDYADELLEKLDELDWPEKTKAMQKHWIGKSVGAEVTFNVADSDLS CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCE FNVFTTRVDTLFGVTYVVLAPENDLVDKLTTPENKAEVESYKTQAKNQSDIERQSITREK EEEHHHHHHHHHCCEEEEECCCCHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH TGVFSGSYAINPINGKEVPIWIGDYVLNTYGTGCVMAVPAHDERDFAFATKYNLPIERVI HCCCCCCEEECCCCCCEEEEEEHHHHHHCCCCCEEEEECCCCCCCEEEEEECCCCHHHHH EGGDSLPYTEYGKMVNSGEFDGLFGNKAKEAVISKLESMNLGRKKINYRLRDWLVSRQRY CCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH WGAPIPIIYCEKCGTVEVPIEQLPVELPYNVEFSPDGKSPLGKCDDFINTTCPKCGGPAK CCCCCCEEEECCCCCEECCHHHCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCCCCCC READTLDTFVCSSWYYLRYPDNNNEKDAFNPELINKMLPVDKYVGGPEHACMHLLYARFI CCHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHCCHHHHCCCHHHHHHHHHHHHHH TKALRDMGYLNFDEPFLSLTHQGLILGPDGLKMSKSKGNTISPDDYIKEFGADVFRMYLM HHHHHHCCCCCCCCHHHHHCCCCEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHH FGFDYTEGGAWSDDAIKSIGKFVDRVERILENAREEIKNSKDNKSTMDKDEKELNYVRHH HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHH SIKSITEDIDKMQFNTSIARLMEFTNALSKYLGSDTLRNASFLRESIIDFITLLAPFAPH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHH FAEEQWELIGINSSIFNEKWPEFDPKALIKDEVEIAVQVNGKIRAKINISTSSSEDEIKE HHCCCEEEEECCHHHHCCCCCCCCCHHHHCCCEEEEEEECCEEEEEEEECCCCCHHHHHH SALNNDDIKNSIGDKEIKKVIVIKNRLVNIVAK HHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA