| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755758
Identifier: 170755758
GI number: 170755758
Start: 1276036
End: 1277235
Strand: Direct
Name: 170755758
Synonym: CLD_3416
Alternate gene names: NA
Gene position: 1276036-1277235 (Clockwise)
Preceding gene: 170755561
Following gene: 170755398
Centisome position: 32.24
GC content: 26.33
Gene sequence:
>1200_bases ATGGATATACTTCAATTAATAAATGAGGTAAATAATAAAAGTAATGAAAAAAATGATAAAATCGCTCCCGTAGAAATATT AAAACAATTTAAATCTGGAAGATCTAAAGCCTTAGTGTTTTTAGTAGAATATGGAGAAGACAATAAAGTAGGAATTATGA AATTTACTGATTGTAAAGAAGCAAAAGTATTTAATGAAGCCTACAAGGTGGCTACTAATAATAATATGCAAAAGTATATA GCAGAATTAATATGTAGCTATAACATAACCTATAATAATAAATTGATAAGTGCTAATTTATATGACTTAGCTGGTGATAA TATATACAATATTGAAACTTTTTTAGATAAGGTTTTAAGTGAACAAGAATTAAAGAAAAATGTTATATCAAAAATAGGTA AGTTTTGTTTTACTTGGAATAAAGAACATGAAAAAAAATATTTAACCCCTTTAGAAATAGTAAAAAATGAAATGTCCTAT AGATATATGGATGAAAAGTATAAAGAAGCTTTTAAGAGCATAGGTGTTTCTAAGGATATTCAATGGGTATCCATAGATGG TACTGAAGAAATATTACCTAATCCATATTATTATTTTAATGATGAAAATTCTTGGAGAGATTTAAAAATAACCTGTTTAA CTTCCTATGCACATGGAGATTTTCAAGGAGATAACGTAATAATAACGGAAGAAAAACCTATTATAATAGATTTTTCTGAT TTGCTTAAGGATTGTAATGTATTTCATGATTTAAGATGCTTAGAAGCTATAACATTAGGAGATTATTTAGATATATATGA AGTAAAACATAGACAACAATGGCTTAAAGTATGTAAAAGTGTAAGTCAAGGAATTTTAAAAGTAGATATACCAGACGGGA AAGGAATGAGCCTTTTAAGAGAACTTATGCCACTTTTAAGGGAAAATTTAAAAATAATAGTTTCTGATATTCGTAATGTT TCCTATAATCCAAGTTTTTTTGTTGCCGGAGTTGCAGCAGGATTAATAAATCTGAGAAAGTTTAAGGATATAGATAAAAA AAGAGCAGCATTTATTTATGCAGCTTATAATCTAAAAAGCATGCTGAAGGATAAAATGATTAATATGTACAATCCATCTC TGGATTCTTGTATGATATTTAATTGGGTAAAGGGAAATCAAGCCAATAAATTAATAAATTTAAAAGAACTAATTGCATAA
Upstream 100 bases:
>100_bases TAATATTTAAATATATTTAATTTATTAGTTTTAAAATAAAATTATATTCAAATAAATAAATGTCTATCAAAATATTATAA ATTTGAAAGGAATAGATTTA
Downstream 100 bases:
>100_bases TGAAGTGAAGTCAATATGTGGTTATATTTGTTTGGCAAAGAATATATTATTTCATATAAAACTTATAGGAGTTTATTTAA GAAATAATTATCAAAATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MDILQLINEVNNKSNEKNDKIAPVEILKQFKSGRSKALVFLVEYGEDNKVGIMKFTDCKEAKVFNEAYKVATNNNMQKYI AELICSYNITYNNKLISANLYDLAGDNIYNIETFLDKVLSEQELKKNVISKIGKFCFTWNKEHEKKYLTPLEIVKNEMSY RYMDEKYKEAFKSIGVSKDIQWVSIDGTEEILPNPYYYFNDENSWRDLKITCLTSYAHGDFQGDNVIITEEKPIIIDFSD LLKDCNVFHDLRCLEAITLGDYLDIYEVKHRQQWLKVCKSVSQGILKVDIPDGKGMSLLRELMPLLRENLKIIVSDIRNV SYNPSFFVAGVAAGLINLRKFKDIDKKRAAFIYAAYNLKSMLKDKMINMYNPSLDSCMIFNWVKGNQANKLINLKELIA
Sequences:
>Translated_399_residues MDILQLINEVNNKSNEKNDKIAPVEILKQFKSGRSKALVFLVEYGEDNKVGIMKFTDCKEAKVFNEAYKVATNNNMQKYI AELICSYNITYNNKLISANLYDLAGDNIYNIETFLDKVLSEQELKKNVISKIGKFCFTWNKEHEKKYLTPLEIVKNEMSY RYMDEKYKEAFKSIGVSKDIQWVSIDGTEEILPNPYYYFNDENSWRDLKITCLTSYAHGDFQGDNVIITEEKPIIIDFSD LLKDCNVFHDLRCLEAITLGDYLDIYEVKHRQQWLKVCKSVSQGILKVDIPDGKGMSLLRELMPLLRENLKIIVSDIRNV SYNPSFFVAGVAAGLINLRKFKDIDKKRAAFIYAAYNLKSMLKDKMINMYNPSLDSCMIFNWVKGNQANKLINLKELIA >Mature_399_residues MDILQLINEVNNKSNEKNDKIAPVEILKQFKSGRSKALVFLVEYGEDNKVGIMKFTDCKEAKVFNEAYKVATNNNMQKYI AELICSYNITYNNKLISANLYDLAGDNIYNIETFLDKVLSEQELKKNVISKIGKFCFTWNKEHEKKYLTPLEIVKNEMSY RYMDEKYKEAFKSIGVSKDIQWVSIDGTEEILPNPYYYFNDENSWRDLKITCLTSYAHGDFQGDNVIITEEKPIIIDFSD LLKDCNVFHDLRCLEAITLGDYLDIYEVKHRQQWLKVCKSVSQGILKVDIPDGKGMSLLRELMPLLRENLKIIVSDIRNV SYNPSFFVAGVAAGLINLRKFKDIDKKRAAFIYAAYNLKSMLKDKMINMYNPSLDSCMIFNWVKGNQANKLINLKELIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46210; Mature: 46210
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILQLINEVNNKSNEKNDKIAPVEILKQFKSGRSKALVFLVEYGEDNKVGIMKFTDCKE CCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEECCCHH AKVFNEAYKVATNNNMQKYIAELICSYNITYNNKLISANLYDLAGDNIYNIETFLDKVLS HHHHHHHHHHHCCCCHHHHHHHHHHHCCEEECCEEEEEEHHCCCCCCEEEHHHHHHHHHH EQELKKNVISKIGKFCFTWNKEHEKKYLTPLEIVKNEMSYRYMDEKYKEAFKSIGVSKDI HHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QWVSIDGTEEILPNPYYYFNDENSWRDLKITCLTSYAHGDFQGDNVIITEEKPIIIDFSD EEEEECCCHHHCCCCEEEECCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCEEEEHHH LLKDCNVFHDLRCLEAITLGDYLDIYEVKHRQQWLKVCKSVSQGILKVDIPDGKGMSLLR HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHH ELMPLLRENLKIIVSDIRNVSYNPSFFVAGVAAGLINLRKFKDIDKKRAAFIYAAYNLKS HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHEEEEEHHHHHH MLKDKMINMYNPSLDSCMIFNWVKGNQANKLINLKELIA HHHHHHHHHCCCCCCCEEEEEEECCCCCCCEECHHHHHC >Mature Secondary Structure MDILQLINEVNNKSNEKNDKIAPVEILKQFKSGRSKALVFLVEYGEDNKVGIMKFTDCKE CCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEECCCHH AKVFNEAYKVATNNNMQKYIAELICSYNITYNNKLISANLYDLAGDNIYNIETFLDKVLS HHHHHHHHHHHCCCCHHHHHHHHHHHCCEEECCEEEEEEHHCCCCCCEEEHHHHHHHHHH EQELKKNVISKIGKFCFTWNKEHEKKYLTPLEIVKNEMSYRYMDEKYKEAFKSIGVSKDI HHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QWVSIDGTEEILPNPYYYFNDENSWRDLKITCLTSYAHGDFQGDNVIITEEKPIIIDFSD EEEEECCCHHHCCCCEEEECCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCEEEEHHH LLKDCNVFHDLRCLEAITLGDYLDIYEVKHRQQWLKVCKSVSQGILKVDIPDGKGMSLLR HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHH ELMPLLRENLKIIVSDIRNVSYNPSFFVAGVAAGLINLRKFKDIDKKRAAFIYAAYNLKS HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHEEEEEHHHHHH MLKDKMINMYNPSLDSCMIFNWVKGNQANKLINLKELIA HHHHHHHHHCCCCCCCEEEEEEECCCCCCCEECHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA