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The map label for this gene is cpsA1 [H]

Identifier: 170755718

GI number: 170755718

Start: 1212842

End: 1214008

Strand: Direct

Name: cpsA1 [H]

Synonym: CLD_3472

Alternate gene names: 170755718

Gene position: 1212842-1214008 (Clockwise)

Preceding gene: 170757386

Following gene: 170754677

Centisome position: 30.64

GC content: 30.25

Gene sequence:

>1167_bases
ATGGATATTGTAAATAAAATAGTAGATGAATATGAGAATTATGTAATAGATTTAAGAAGGTATTTTCATTCTTATCCAGA
ATGCAGCTGGGATGAAAAGAATACATCTAAAAAAATTAAGAGTGAATTAAATAAATTTGATATACCTTTTGAAAGTATAG
CTAATACAGGGATTTTAGTAAATATAAAAGGAAAAGAGACAGGTAAAACTATCTTATTAAGAGCAGATATGGATGCTATT
CAGGTTAATGAATGTAATAATTTTGATTATGTATCTAAAAATAAAGGTATAATGCATGCTTGTGGTCATGATGGACACAT
GGCAATGCTTTTGGGAGCTGCAATAGTTTTAAATAATATAAAGGATAAAATTAAAGGAAATATAAAGTTATTATTTCAAC
CTGCAGAAGAAGTTGGAGAAGGAGCAGCAATGTGTATAAAAGAAGGTGTATTAGATTCAGTAGATAATGCCTTTGCTATT
CATCTTTGGAGTAATGTTCCCTATGGTATGGTAGCTATTGAAGAAGGACCAATTATGTCTTCGGCAGATGTGTTTAAAAT
AAAAATAAAAGGTAAGGGTGGTCATGGAGCAATGCCTCATGAGACCATAGATTCTGTATTAGCAGCTTCTTCCTTTGTAA
TGAGTTTGCAAAGTATAGTAAGTAGAGAAGTAGACCCCCTAGAACCTTTAGTAATTTCTGTAGGTAAATTACAGGCAGGG
AGTAGATTTAATGTTATAGCTAATGAGGCTATTATTGAAGGAACATCTAGGTATTTTAATATGTCATTTAGGGAAAAACT
ACCTAATATAATTGAAAGAATATTAAAAAATTCTACTGGTGTTTATAATGCTAGGGGAGAGTTAAGCTATAAATTTGCAA
CGCCTGTAACTATAAATGATGAAAAATCTGTTTATAGGGCAAAACAGGTTATAAATAAAATTTTAGGGGAAGATAAAATA
TATAAAATGAATAAAAATATGGCTACAGAGGACTTTGGATATTATCTAGAGAAAGTGCCTGGAGCTTTAGCATTTTTAGG
TGTGGGAAATGAAACTTTAGGATCTAATTATCCTCAGCATCATGAAAAATATAACATAGATGAAAGGGCCTTAAAAATAG
GGGTAAAACTTTATTGTGAATATGCATTAGATTTTTTAAATTGTTAG

Upstream 100 bases:

>100_bases
TGAATTATGCAATTTTCTCACTTAAATGGATAAAGTTTTTATAATAAAATAAGTCTACTTAGCTATAAGCTACATAAGAC
ATAGATAATAGGTGATAATT

Downstream 100 bases:

>100_bases
GTATATTAAAAATCAAGTAATTTTAATAAAGTATAATAAGAGATTATTACAAACAGAGTTAATTTTAATATAGAAAATAT
AAAAAATACATGTAATAAAC

Product: amidohydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MDIVNKIVDEYENYVIDLRRYFHSYPECSWDEKNTSKKIKSELNKFDIPFESIANTGILVNIKGKETGKTILLRADMDAI
QVNECNNFDYVSKNKGIMHACGHDGHMAMLLGAAIVLNNIKDKIKGNIKLLFQPAEEVGEGAAMCIKEGVLDSVDNAFAI
HLWSNVPYGMVAIEEGPIMSSADVFKIKIKGKGGHGAMPHETIDSVLAASSFVMSLQSIVSREVDPLEPLVISVGKLQAG
SRFNVIANEAIIEGTSRYFNMSFREKLPNIIERILKNSTGVYNARGELSYKFATPVTINDEKSVYRAKQVINKILGEDKI
YKMNKNMATEDFGYYLEKVPGALAFLGVGNETLGSNYPQHHEKYNIDERALKIGVKLYCEYALDFLNC

Sequences:

>Translated_388_residues
MDIVNKIVDEYENYVIDLRRYFHSYPECSWDEKNTSKKIKSELNKFDIPFESIANTGILVNIKGKETGKTILLRADMDAI
QVNECNNFDYVSKNKGIMHACGHDGHMAMLLGAAIVLNNIKDKIKGNIKLLFQPAEEVGEGAAMCIKEGVLDSVDNAFAI
HLWSNVPYGMVAIEEGPIMSSADVFKIKIKGKGGHGAMPHETIDSVLAASSFVMSLQSIVSREVDPLEPLVISVGKLQAG
SRFNVIANEAIIEGTSRYFNMSFREKLPNIIERILKNSTGVYNARGELSYKFATPVTINDEKSVYRAKQVINKILGEDKI
YKMNKNMATEDFGYYLEKVPGALAFLGVGNETLGSNYPQHHEKYNIDERALKIGVKLYCEYALDFLNC
>Mature_388_residues
MDIVNKIVDEYENYVIDLRRYFHSYPECSWDEKNTSKKIKSELNKFDIPFESIANTGILVNIKGKETGKTILLRADMDAI
QVNECNNFDYVSKNKGIMHACGHDGHMAMLLGAAIVLNNIKDKIKGNIKLLFQPAEEVGEGAAMCIKEGVLDSVDNAFAI
HLWSNVPYGMVAIEEGPIMSSADVFKIKIKGKGGHGAMPHETIDSVLAASSFVMSLQSIVSREVDPLEPLVISVGKLQAG
SRFNVIANEAIIEGTSRYFNMSFREKLPNIIERILKNSTGVYNARGELSYKFATPVTINDEKSVYRAKQVINKILGEDKI
YKMNKNMATEDFGYYLEKVPGALAFLGVGNETLGSNYPQHHEKYNIDERALKIGVKLYCEYALDFLNC

Specific function: Can release basic, acidic, aromatic, and, to a lesser extent, aliphatic amino acids [H]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI87081880, Length=437, Percent_Identity=25.4004576659039, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017439
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 43304; Mature: 43304

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIVNKIVDEYENYVIDLRRYFHSYPECSWDEKNTSKKIKSELNKFDIPFESIANTGILV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCEEE
NIKGKETGKTILLRADMDAIQVNECNNFDYVSKNKGIMHACGHDGHMAMLLGAAIVLNNI
EEECCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
KDKIKGNIKLLFQPAEEVGEGAAMCIKEGVLDSVDNAFAIHLWSNVPYGMVAIEEGPIMS
HHHHCCCEEEEEECHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCC
SADVFKIKIKGKGGHGAMPHETIDSVLAASSFVMSLQSIVSREVDPLEPLVISVGKLQAG
CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCC
SRFNVIANEAIIEGTSRYFNMSFREKLPNIIERILKNSTGVYNARGELSYKFATPVTIND
CCEEEEECHHHHCCCHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEECCEEECC
EKSVYRAKQVINKILGEDKIYKMNKNMATEDFGYYLEKVPGALAFLGVGNETLGSNYPQH
CHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCH
HEKYNIDERALKIGVKLYCEYALDFLNC
HHCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDIVNKIVDEYENYVIDLRRYFHSYPECSWDEKNTSKKIKSELNKFDIPFESIANTGILV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCEEE
NIKGKETGKTILLRADMDAIQVNECNNFDYVSKNKGIMHACGHDGHMAMLLGAAIVLNNI
EEECCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
KDKIKGNIKLLFQPAEEVGEGAAMCIKEGVLDSVDNAFAIHLWSNVPYGMVAIEEGPIMS
HHHHCCCEEEEEECHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCC
SADVFKIKIKGKGGHGAMPHETIDSVLAASSFVMSLQSIVSREVDPLEPLVISVGKLQAG
CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCC
SRFNVIANEAIIEGTSRYFNMSFREKLPNIIERILKNSTGVYNARGELSYKFATPVTIND
CCEEEEECHHHHCCCHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEECCEEECC
EKSVYRAKQVINKILGEDKIYKMNKNMATEDFGYYLEKVPGALAFLGVGNETLGSNYPQH
CHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCH
HEKYNIDERALKIGVKLYCEYALDFLNC
HHCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7559343; 11427726; 1597179 [H]