| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is aroA
Identifier: 170755701
GI number: 170755701
Start: 1636104
End: 1637432
Strand: Direct
Name: aroA
Synonym: CLD_3077
Alternate gene names: 170755701
Gene position: 1636104-1637432 (Clockwise)
Preceding gene: 170755104
Following gene: 170756818
Centisome position: 41.33
GC content: 28.14
Gene sequence:
>1329_bases ATGGATTTATTCGTTAAAGGTTTAAAAAAAAGTTTAACAGGAGAATACGAAATAATAGGAGACAAATCTATAGGTCATAG ATCTTTAATAATAGGAGCATTACCTAAAGGAGAATATAAAGTTTATAATTTCCCTAAAAACTTAGATTGTATGGCCACTT TAGACTCTATAAAAAAGCTTGGAGTAGATATAAAGGTAGAAGGAAATGTCTTAGAGGTAAATTCTCCTGGTTATGAAAAT TTTAATAAGAAACCGGAAGTATTACAGGGTAAGAATTCAGGAACCACGGTAAGACTTATGGCGGGTATTTTGAGTGGCAT AAGGGCAGAAACAAGGTTTATAGGCGATGAATCTTTAAGTTGTAGACCTATGAAAAGAATTATAGAACCCTTAGAAAAAA TGGGAGCAAAAATAGAGAGCAAAGATAATAAGCTACCTCTTAAGTTTTTAAAGCATAGTGGATTAAATTCTATAAAATAT AATATGGAAATAGCATCAGCCCAAGTAAAATCTTGTATATTATTAGCAGGTTTAATGTCAAAAGGAAAAACCACAATAGT AGAGAATAAATCTACTAGAGATCATACGGAGAGAATGTTAAAATATTTAGATGCTTCTATAAATATAAGGAATATATATT CTAAGGATAAAAAGAAAAGTAGTTCTAAAAAGGAAATAACTATAGAAGAATCTAAATTAAATAGTAAAGATATATATGTA CCGGGAGATATATCTTCGGCAGCCTTTTTAATTTCAGCGGCTTTACTTATACAAGGTTCTAATCTATGTATAAAAAATGT ACTTTTAAATGAGGGCAGGATAGAATATATAAATGTTTTAAGGAATATGGGAGCAAATATAGAAATAGAAAAGGGAAAAT TATTAAATGGTGAACCTGTAGGAAATATATATGTAAAAGAAAGCTATTTAAAGGGTATTACAGTAGAAAGACACATTACG CCTAATATAATAGATGAAATACCAGTATTATCTGTAATAGCAGCCTTTAGTGAAGGAAAAACTATATTTAAATCTGTAGA AGAACTAAAATTTAAAGAAAGTGATAGAGTAGAAGCTATTATAGAAAATTTGAAAAGAGCTGATGTAAAAGCCATATATA AAAATGGAGATTTGATTATAGAAGGAAACAGATCTTACATAGATAAATCCTTAGAGATAGAAAGTTTCAAAGATCACAGA ATAGCTTTAGCTTTTTTAGTTTTATCTCTAAAAAATAAAAAACATACTTTAATTAAAGATTACCAATGCACAGAAATATC ATTCCCTAATTCTTTAAGTTTATTTAATCTAGATTACGAGTTAATTTAG
Upstream 100 bases:
>100_bases ATATTTTTATCGAAATTTGTGTTAATAGGTTAAAAATAGATTAATATAATTATAAAATTATATTAAATCTAAATTAATAT TAAGAAATTGGTGAATAAAA
Downstream 100 bases:
>100_bases ATAGGCTTAAATTTTTTATATATAAAAAATTTTTACTATAATATATAAATTTAATTTAAAAAAGTAATAGTTATTATAAT AAGGAATTTGTTATTATATA
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS [H]
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MDLFVKGLKKSLTGEYEIIGDKSIGHRSLIIGALPKGEYKVYNFPKNLDCMATLDSIKKLGVDIKVEGNVLEVNSPGYEN FNKKPEVLQGKNSGTTVRLMAGILSGIRAETRFIGDESLSCRPMKRIIEPLEKMGAKIESKDNKLPLKFLKHSGLNSIKY NMEIASAQVKSCILLAGLMSKGKTTIVENKSTRDHTERMLKYLDASINIRNIYSKDKKKSSSKKEITIEESKLNSKDIYV PGDISSAAFLISAALLIQGSNLCIKNVLLNEGRIEYINVLRNMGANIEIEKGKLLNGEPVGNIYVKESYLKGITVERHIT PNIIDEIPVLSVIAAFSEGKTIFKSVEELKFKESDRVEAIIENLKRADVKAIYKNGDLIIEGNRSYIDKSLEIESFKDHR IALAFLVLSLKNKKHTLIKDYQCTEISFPNSLSLFNLDYELI
Sequences:
>Translated_442_residues MDLFVKGLKKSLTGEYEIIGDKSIGHRSLIIGALPKGEYKVYNFPKNLDCMATLDSIKKLGVDIKVEGNVLEVNSPGYEN FNKKPEVLQGKNSGTTVRLMAGILSGIRAETRFIGDESLSCRPMKRIIEPLEKMGAKIESKDNKLPLKFLKHSGLNSIKY NMEIASAQVKSCILLAGLMSKGKTTIVENKSTRDHTERMLKYLDASINIRNIYSKDKKKSSSKKEITIEESKLNSKDIYV PGDISSAAFLISAALLIQGSNLCIKNVLLNEGRIEYINVLRNMGANIEIEKGKLLNGEPVGNIYVKESYLKGITVERHIT PNIIDEIPVLSVIAAFSEGKTIFKSVEELKFKESDRVEAIIENLKRADVKAIYKNGDLIIEGNRSYIDKSLEIESFKDHR IALAFLVLSLKNKKHTLIKDYQCTEISFPNSLSLFNLDYELI >Mature_442_residues MDLFVKGLKKSLTGEYEIIGDKSIGHRSLIIGALPKGEYKVYNFPKNLDCMATLDSIKKLGVDIKVEGNVLEVNSPGYEN FNKKPEVLQGKNSGTTVRLMAGILSGIRAETRFIGDESLSCRPMKRIIEPLEKMGAKIESKDNKLPLKFLKHSGLNSIKY NMEIASAQVKSCILLAGLMSKGKTTIVENKSTRDHTERMLKYLDASINIRNIYSKDKKKSSSKKEITIEESKLNSKDIYV PGDISSAAFLISAALLIQGSNLCIKNVLLNEGRIEYINVLRNMGANIEIEKGKLLNGEPVGNIYVKESYLKGITVERHIT PNIIDEIPVLSVIAAFSEGKTIFKSVEELKFKESDRVEAIIENLKRADVKAIYKNGDLIIEGNRSYIDKSLEIESFKDHR IALAFLVLSLKNKKHTLIKDYQCTEISFPNSLSLFNLDYELI
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787137, Length=438, Percent_Identity=22.8310502283105, Blast_Score=87, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6320332, Length=470, Percent_Identity=22.1276595744681, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 [H]
Pfam domain/function: PF00275 EPSP_synthase [H]
EC number: =2.5.1.19 [H]
Molecular weight: Translated: 49459; Mature: 49459
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: PS00104 EPSP_SYNTHASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLFVKGLKKSLTGEYEIIGDKSIGHRSLIIGALPKGEYKVYNFPKNLDCMATLDSIKKL CCHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHC GVDIKVEGNVLEVNSPGYENFNKKPEVLQGKNSGTTVRLMAGILSGIRAETRFIGDESLS CCEEEECCCEEEECCCCCCCCCCCCHHEECCCCCCCHHHHHHHHHHHHHHHEECCCCCCC CRPMKRIIEPLEKMGAKIESKDNKLPLKFLKHSGLNSIKYNMEIASAQVKSCILLAGLMS CCHHHHHHHHHHHHCCEECCCCCCCCHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHC KGKTTIVENKSTRDHTERMLKYLDASINIRNIYSKDKKKSSSKKEITIEESKLNSKDIYV CCCEEEEECCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCEEEEECCCCCCCCEEE PGDISSAAFLISAALLIQGSNLCIKNVLLNEGRIEYINVLRNMGANIEIEKGKLLNGEPV CCCCCHHHHHHHHHHHHCCCCCEEEHHHHCCCCHHHHHHHHHCCCCEEEECCEEECCCCC GNIYVKESYLKGITVERHITPNIIDEIPVLSVIAAFSEGKTIFKSVEELKFKESDRVEAI CEEEEEEHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHH IENLKRADVKAIYKNGDLIIEGNRSYIDKSLEIESFKDHRIALAFLVLSLKNKKHTLIKD HHHHHHHHHHEEEECCCEEEECCHHHHCCCCEECCCCCHHHHHHHHHHHHCCCCCCEEEC YQCTEISFPNSLSLFNLDYELI CEEEEECCCCCEEEEECCEEEC >Mature Secondary Structure MDLFVKGLKKSLTGEYEIIGDKSIGHRSLIIGALPKGEYKVYNFPKNLDCMATLDSIKKL CCHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHC GVDIKVEGNVLEVNSPGYENFNKKPEVLQGKNSGTTVRLMAGILSGIRAETRFIGDESLS CCEEEECCCEEEECCCCCCCCCCCCHHEECCCCCCCHHHHHHHHHHHHHHHEECCCCCCC CRPMKRIIEPLEKMGAKIESKDNKLPLKFLKHSGLNSIKYNMEIASAQVKSCILLAGLMS CCHHHHHHHHHHHHCCEECCCCCCCCHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHC KGKTTIVENKSTRDHTERMLKYLDASINIRNIYSKDKKKSSSKKEITIEESKLNSKDIYV CCCEEEEECCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCEEEEECCCCCCCCEEE PGDISSAAFLISAALLIQGSNLCIKNVLLNEGRIEYINVLRNMGANIEIEKGKLLNGEPV CCCCCHHHHHHHHHHHHCCCCCEEEHHHHCCCCHHHHHHHHHCCCCEEEECCEEECCCCC GNIYVKESYLKGITVERHITPNIIDEIPVLSVIAAFSEGKTIFKSVEELKFKESDRVEAI CEEEEEEHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHH IENLKRADVKAIYKNGDLIIEGNRSYIDKSLEIESFKDHRIALAFLVLSLKNKKHTLIKD HHHHHHHHHHEEEECCCEEEECCHHHHCCCCEECCCCCHHHHHHHHHHHHCCCCCCEEEC YQCTEISFPNSLSLFNLDYELI CEEEEECCCCCEEEEECCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12552129 [H]