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The map label for this gene is ymfN [H]

Identifier: 170755696

GI number: 170755696

Start: 2694437

End: 2696137

Strand: Reverse

Name: ymfN [H]

Synonym: CLD_2058

Alternate gene names: 170755696

Gene position: 2696137-2694437 (Counterclockwise)

Preceding gene: 170755379

Following gene: 170754696

Centisome position: 68.11

GC content: 32.22

Gene sequence:

>1701_bases
ATGAGTGATATAGCTAGATATTATACTATAGTTTACAGATATGCATGTGATATTGTAGACGGGAAAATTAAAGCTTGTAA
AAAGCATATACAAGCTTGTAAAAGGTTCCTTGATGATTTGGATAAGTCTCAAAATGAAGACTATCCTTATTTTTTTGACT
ATGAAGAACTATACAAATTTTATAAATGGGCTGGATTATTCAAACATAGAGCTGGTGTGCTAAAAGGTAAGAAAATTGAC
CTTGTGCCATTCCAGCTTTTTATTGTTGGAAATTTATTTTGTTGGAAACATAAAGATACCTGTTTAAGGCGATTTAGAAA
AGCTTATATTCAAATAGCTAGGAAAAATGCTAAGTCACAATTATTGGGTGTAATAGCTAGTTATGAATGTTTCTTAAGCG
AGGAACAGGCCGAAGTTTATCTTGCTGGATGGGATAAAGAACAATCAAGTATAGTTTACAGAGAAATAAAGTATCAAATA
GAAAGTGCTGAATTATTAAAAGCTAAATACACTGATAGCTATGGAAGAATAACTCATTTAAAGAGTGGTTCATTTATAAA
ACCATTATCTCGTGAAGCTAAGAATACTGGTGATGGTACAAATCCAAGTTTAGGTATTGTTGATGAATACCACGCTCATA
AGACTTCTGAGATATATGATGTTATCCTCTCAGGTATGGTTGCTAGAGAACAACCTTTAATGGTTATTATAACAACAGCT
GGATTTGATTTAAGTAGACCATGCTTTAAAGAGTATCAATACGTTAGTAAAATACTTGATTCTAATAATTCTGTAGAGAA
TGAAGAATACTTTGTAATTGTATGTGAGCTTGAACCAGAGGATGACATAAAAGATGAAAGCAACTGGATAAAAGCGAACC
CTATAGTAGCTACTTATGAAAATGGATTGAATTATTTAAGAGGAGAACTCAAAGCTGCACTTGATGCTCCAGAGAAAATG
AGAAACTTTTTAACTAAGAATATGGATAAGTGGGTAGACATGAAAGAAAATGGCTACATGAATATGATTAAATGGAGCGA
AGCAGAGGAAGTATTTACACTTGAGAAATTTATAGGTATGGATTGTGTAATGGGAATGGATTTATCTACAAAGCTAGATC
TAACTTCAATAGCTTTTGAGTTCTGCATTGATGGAATTTATTACACTTACCAACATTCATTTATGCCACAAGAAACATAT
GAAAAAAGAATGAGAGAAGGTAAGTATAGATTTGATTTATGGGTAGAAGAAGAGCATTTAACAATAATTGAAGGTGCAGT
AATTGATTATAACGCAGTAAGAAATTATTTTAAAGATGTAGAATCTGAATATAAAATAAATATACTAGAGATATGTTATG
ATCCAGCCCACGCAACTCACTTTATTCAAGAATTAGAATTTGAAGGTTATATATGTATTGAAGTTAGGCAAGGGGCACTA
ACTTTAAATGAGCCTACTCAAGATTATAGGGCTAGAATATATGATGGTACAATGAAACATCCTAAGGATGGATTGTATAC
ATGGGCAGCGAGTAATGCAGTTTGTTCTAATCCTAATAGAAAACAAGAGTATATAATGCTAGATAAAGCTAAATCAAGTG
AGAAAATAGACCCAATGGCCGCAACAATAGATGCTCATGTGAGAGGAATGGTTATGTTAGATGATGGGGCAGGAGATATA
TTTTATAGTCCAGATATATAG

Upstream 100 bases:

>100_bases
ATTTAGGTTTAACGATAAGTAGTAGATGTAAGTTAGTTGTACCTAAAAAAGAGGAACCGGATAAAAAGACAGAAGAGGAG
AAGCTTTTCGGTAGTTCCCT

Downstream 100 bases:

>100_bases
AGAGGAGGTGGAAGATTGGGTATATGGAATAAGATTAAAAGTTTAATTAAAGCACCATTCAAAACTAGTATCATAAGAGA
TTATAGTAGTGGGTTTAGTT

Product: putative phage terminase, large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 565

Protein sequence:

>566_residues
MSDIARYYTIVYRYACDIVDGKIKACKKHIQACKRFLDDLDKSQNEDYPYFFDYEELYKFYKWAGLFKHRAGVLKGKKID
LVPFQLFIVGNLFCWKHKDTCLRRFRKAYIQIARKNAKSQLLGVIASYECFLSEEQAEVYLAGWDKEQSSIVYREIKYQI
ESAELLKAKYTDSYGRITHLKSGSFIKPLSREAKNTGDGTNPSLGIVDEYHAHKTSEIYDVILSGMVAREQPLMVIITTA
GFDLSRPCFKEYQYVSKILDSNNSVENEEYFVIVCELEPEDDIKDESNWIKANPIVATYENGLNYLRGELKAALDAPEKM
RNFLTKNMDKWVDMKENGYMNMIKWSEAEEVFTLEKFIGMDCVMGMDLSTKLDLTSIAFEFCIDGIYYTYQHSFMPQETY
EKRMREGKYRFDLWVEEEHLTIIEGAVIDYNAVRNYFKDVESEYKINILEICYDPAHATHFIQELEFEGYICIEVRQGAL
TLNEPTQDYRARIYDGTMKHPKDGLYTWAASNAVCSNPNRKQEYIMLDKAKSSEKIDPMAATIDAHVRGMVMLDDGAGDI
FYSPDI

Sequences:

>Translated_566_residues
MSDIARYYTIVYRYACDIVDGKIKACKKHIQACKRFLDDLDKSQNEDYPYFFDYEELYKFYKWAGLFKHRAGVLKGKKID
LVPFQLFIVGNLFCWKHKDTCLRRFRKAYIQIARKNAKSQLLGVIASYECFLSEEQAEVYLAGWDKEQSSIVYREIKYQI
ESAELLKAKYTDSYGRITHLKSGSFIKPLSREAKNTGDGTNPSLGIVDEYHAHKTSEIYDVILSGMVAREQPLMVIITTA
GFDLSRPCFKEYQYVSKILDSNNSVENEEYFVIVCELEPEDDIKDESNWIKANPIVATYENGLNYLRGELKAALDAPEKM
RNFLTKNMDKWVDMKENGYMNMIKWSEAEEVFTLEKFIGMDCVMGMDLSTKLDLTSIAFEFCIDGIYYTYQHSFMPQETY
EKRMREGKYRFDLWVEEEHLTIIEGAVIDYNAVRNYFKDVESEYKINILEICYDPAHATHFIQELEFEGYICIEVRQGAL
TLNEPTQDYRARIYDGTMKHPKDGLYTWAASNAVCSNPNRKQEYIMLDKAKSSEKIDPMAATIDAHVRGMVMLDDGAGDI
FYSPDI
>Mature_565_residues
SDIARYYTIVYRYACDIVDGKIKACKKHIQACKRFLDDLDKSQNEDYPYFFDYEELYKFYKWAGLFKHRAGVLKGKKIDL
VPFQLFIVGNLFCWKHKDTCLRRFRKAYIQIARKNAKSQLLGVIASYECFLSEEQAEVYLAGWDKEQSSIVYREIKYQIE
SAELLKAKYTDSYGRITHLKSGSFIKPLSREAKNTGDGTNPSLGIVDEYHAHKTSEIYDVILSGMVAREQPLMVIITTAG
FDLSRPCFKEYQYVSKILDSNNSVENEEYFVIVCELEPEDDIKDESNWIKANPIVATYENGLNYLRGELKAALDAPEKMR
NFLTKNMDKWVDMKENGYMNMIKWSEAEEVFTLEKFIGMDCVMGMDLSTKLDLTSIAFEFCIDGIYYTYQHSFMPQETYE
KRMREGKYRFDLWVEEEHLTIIEGAVIDYNAVRNYFKDVESEYKINILEICYDPAHATHFIQELEFEGYICIEVRQGALT
LNEPTQDYRARIYDGTMKHPKDGLYTWAASNAVCSNPNRKQEYIMLDKAKSSEKIDPMAATIDAHVRGMVMLDDGAGDIF
YSPDI

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage terminase family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR005021
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF03354 Terminase_1 [H]

EC number: NA

Molecular weight: Translated: 65818; Mature: 65686

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIARYYTIVYRYACDIVDGKIKACKKHIQACKRFLDDLDKSQNEDYPYFFDYEELYKF
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHH
YKWAGLFKHRAGVLKGKKIDLVPFQLFIVGNLFCWKHKDTCLRRFRKAYIQIARKNAKSQ
HHHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
LLGVIASYECFLSEEQAEVYLAGWDKEQSSIVYREIKYQIESAELLKAKYTDSYGRITHL
HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHEEHHHHHHHHHHHHHHHHCCCCCCEEEE
KSGSFIKPLSREAKNTGDGTNPSLGIVDEYHAHKTSEIYDVILSGMVAREQPLMVIITTA
CCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEC
GFDLSRPCFKEYQYVSKILDSNNSVENEEYFVIVCELEPEDDIKDESNWIKANPIVATYE
CCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEECCEEEEHH
NGLNYLRGELKAALDAPEKMRNFLTKNMDKWVDMKENGYMNMIKWSEAEEVFTLEKFIGM
HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCC
DCVMGMDLSTKLDLTSIAFEFCIDGIYYTYQHSFMPQETYEKRMREGKYRFDLWVEEEHL
HHEECCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCEEEEEEEECCCE
TIIEGAVIDYNAVRNYFKDVESEYKINILEICYDPAHATHFIQELEFEGYICIEVRQGAL
EEEECCEECHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEEECCEE
TLNEPTQDYRARIYDGTMKHPKDGLYTWAASNAVCSNPNRKQEYIMLDKAKSSEKIDPMA
EECCCCHHHHHEEECCCCCCCCCCEEEEECCCCEECCCCCCCEEEEEECCCCCCCCCCHH
ATIDAHVRGMVMLDDGAGDIFYSPDI
HHHHHHHEEEEEEECCCCCEEECCCC
>Mature Secondary Structure 
SDIARYYTIVYRYACDIVDGKIKACKKHIQACKRFLDDLDKSQNEDYPYFFDYEELYKF
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHH
YKWAGLFKHRAGVLKGKKIDLVPFQLFIVGNLFCWKHKDTCLRRFRKAYIQIARKNAKSQ
HHHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
LLGVIASYECFLSEEQAEVYLAGWDKEQSSIVYREIKYQIESAELLKAKYTDSYGRITHL
HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHEEHHHHHHHHHHHHHHHHCCCCCCEEEE
KSGSFIKPLSREAKNTGDGTNPSLGIVDEYHAHKTSEIYDVILSGMVAREQPLMVIITTA
CCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEC
GFDLSRPCFKEYQYVSKILDSNNSVENEEYFVIVCELEPEDDIKDESNWIKANPIVATYE
CCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEECCEEEEHH
NGLNYLRGELKAALDAPEKMRNFLTKNMDKWVDMKENGYMNMIKWSEAEEVFTLEKFIGM
HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCC
DCVMGMDLSTKLDLTSIAFEFCIDGIYYTYQHSFMPQETYEKRMREGKYRFDLWVEEEHL
HHEECCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCEEEEEEEECCCE
TIIEGAVIDYNAVRNYFKDVESEYKINILEICYDPAHATHFIQELEFEGYICIEVRQGAL
EEEECCEECHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEEECCEE
TLNEPTQDYRARIYDGTMKHPKDGLYTWAASNAVCSNPNRKQEYIMLDKAKSSEKIDPMA
EECCCCHHHHHEEECCCCCCCCCCEEEEECCCCEECCCCCCCEEEEEECCCCCCCCCCHH
ATIDAHVRGMVMLDDGAGDIFYSPDI
HHHHHHHEEEEEEECCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]