Click here to switch to the map view.

The map label for this gene is 170755693

Identifier: 170755693

GI number: 170755693

Start: 505708

End: 507012

Strand: Direct

Name: 170755693

Synonym: CLD_0345

Alternate gene names: NA

Gene position: 505708-507012 (Clockwise)

Preceding gene: 170754673

Following gene: 170754443

Centisome position: 12.78

GC content: 26.21

Gene sequence:

>1305_bases
ATGGAGATACTTTCTTTGGGGGAAAAAATTAAAAGAAGAAGAAAAGAATTAAATATGACATTAAAGGACTTAGCTGGAGA
CAGAATAACTCCAGGACAGATAAGTCTTGTAGAATCAGGTAAATCAAATCCGAGTATGGATTTATTGGAATATTTGGCAG
AAACATTAAATACATCTATAGAATATTTCATGGAATCTGAAGATACTCAGGCTGAAAAAATATGTAAATATTATGAAAAT
ATAGCAGAATCTCATATTATAAATGATAATTTAAATATAGCAGAACAATATATAGAAAAATCTCTTTATTATGCAGAAAA
ATACAACCTAGAATATAGAAAAGCTAGAAATCTTTATTTAAGAGGACTTATATACATGCATAAGGGAGATCTTCCCGTTG
CTCAGCAATATCTTTTATCGTCAAACGTAATATTTATTAAAAATAACAACTATGAAGAAATAGTTAATACCTTTGTTAAT
TTGGGAAAGATAACAATATTTCTAAAGGCTTATCATTCTTCTTGTAGTTATTTTCAGCAAGCAGAAAAAGTTTATAGCGA
TCATGATATAGGAAATGATGATCTTTTAGCAGAAATATATTATCATATAGCTTATACATATTTTAAGTTAGATAATATAA
ATAAAGCTATAGATTATTCTTATTTAGCAAAGGAAAAATATAGACAACTAAATAATAAAAAAGAATATGCAAACTCTCTT
TTACTATTATCTCAACAATATAGTGGAAAAGGAGAAATGGATAGAGCTATAAGATATTCAGAAAAAGCTTTAAACATATT
TAAAGAAGTAGATGATGTGTTATATACCTCTAAAATAGAAAATAATTTAGGTAAGTTATTTTATGAATTTGATAATTTAG
AGGAGTCTTTTATACATTTTAATAGAGCTAAAGAAATAAGGGAGTCTAATAAGGATCCGCTACTTTTAGAAACTTTGATA
AATATATGTGAGAATTACATAAAGCAAAAGGATATTCATAATTGTAAATTAATTTTAGATGAAATAATGAACAATTTAGA
AAATGGAAATGAAATAGCTTTAGTAGATTATTATTTATTAAGACATAGAGTAGAACTTCTGCAAGGCGATTTAGAAGAAG
CAGAAAGTACACTTTTAATGGCACTAAACTTTGTTAAGAACATGCAAGATAAGGAAAGAATAGGGGAAATATCCATAATA
ATAGGTAAATTCTATATAGATAATGGAAATGACAAAGAAGCGGCTAAGTATTTAAATGAAGGTGTAGAAATGTTCAAGGA
AGTAGGATTATTAAAAGACATGTAA

Upstream 100 bases:

>100_bases
ACTTTTATAAAAAATTTATCCTAATTGAAAAAATATGTTATAATGAGGTTATGAAAACTATAAAAAAAAATTAACTATAT
TAATAGCGAGGAAGATACGT

Downstream 100 bases:

>100_bases
GTAGATTTATTTTGTGGATGGGTGAGATTTTATGGAGATACTTTCTGTAGGGCAAAAAATTAAAAGAGCTAGGGTTTATA
AAGGATATACCCTAAAAGAA

Product: TPR repeat-containing DNA binding protein

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Tetratricopeptide Repeat Protein; Transcriptional Regulator XRE Family; XRE Family Transcriptional Regulator; TPR Repeat-Containing Protein; Ferrous Iron Transport Protein B-Like Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MEILSLGEKIKRRRKELNMTLKDLAGDRITPGQISLVESGKSNPSMDLLEYLAETLNTSIEYFMESEDTQAEKICKYYEN
IAESHIINDNLNIAEQYIEKSLYYAEKYNLEYRKARNLYLRGLIYMHKGDLPVAQQYLLSSNVIFIKNNNYEEIVNTFVN
LGKITIFLKAYHSSCSYFQQAEKVYSDHDIGNDDLLAEIYYHIAYTYFKLDNINKAIDYSYLAKEKYRQLNNKKEYANSL
LLLSQQYSGKGEMDRAIRYSEKALNIFKEVDDVLYTSKIENNLGKLFYEFDNLEESFIHFNRAKEIRESNKDPLLLETLI
NICENYIKQKDIHNCKLILDEIMNNLENGNEIALVDYYLLRHRVELLQGDLEEAESTLLMALNFVKNMQDKERIGEISII
IGKFYIDNGNDKEAAKYLNEGVEMFKEVGLLKDM

Sequences:

>Translated_434_residues
MEILSLGEKIKRRRKELNMTLKDLAGDRITPGQISLVESGKSNPSMDLLEYLAETLNTSIEYFMESEDTQAEKICKYYEN
IAESHIINDNLNIAEQYIEKSLYYAEKYNLEYRKARNLYLRGLIYMHKGDLPVAQQYLLSSNVIFIKNNNYEEIVNTFVN
LGKITIFLKAYHSSCSYFQQAEKVYSDHDIGNDDLLAEIYYHIAYTYFKLDNINKAIDYSYLAKEKYRQLNNKKEYANSL
LLLSQQYSGKGEMDRAIRYSEKALNIFKEVDDVLYTSKIENNLGKLFYEFDNLEESFIHFNRAKEIRESNKDPLLLETLI
NICENYIKQKDIHNCKLILDEIMNNLENGNEIALVDYYLLRHRVELLQGDLEEAESTLLMALNFVKNMQDKERIGEISII
IGKFYIDNGNDKEAAKYLNEGVEMFKEVGLLKDM
>Mature_434_residues
MEILSLGEKIKRRRKELNMTLKDLAGDRITPGQISLVESGKSNPSMDLLEYLAETLNTSIEYFMESEDTQAEKICKYYEN
IAESHIINDNLNIAEQYIEKSLYYAEKYNLEYRKARNLYLRGLIYMHKGDLPVAQQYLLSSNVIFIKNNNYEEIVNTFVN
LGKITIFLKAYHSSCSYFQQAEKVYSDHDIGNDDLLAEIYYHIAYTYFKLDNINKAIDYSYLAKEKYRQLNNKKEYANSL
LLLSQQYSGKGEMDRAIRYSEKALNIFKEVDDVLYTSKIENNLGKLFYEFDNLEESFIHFNRAKEIRESNKDPLLLETLI
NICENYIKQKDIHNCKLILDEIMNNLENGNEIALVDYYLLRHRVELLQGDLEEAESTLLMALNFVKNMQDKERIGEISII
IGKFYIDNGNDKEAAKYLNEGVEMFKEVGLLKDM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50828; Mature: 50828

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION ; PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILSLGEKIKRRRKELNMTLKDLAGDRITPGQISLVESGKSNPSMDLLEYLAETLNTSI
CCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
EYFMESEDTQAEKICKYYENIAESHIINDNLNIAEQYIEKSLYYAEKYNLEYRKARNLYL
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
RGLIYMHKGDLPVAQQYLLSSNVIFIKNNNYEEIVNTFVNLGKITIFLKAYHSSCSYFQQ
HHEEEEECCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHH
AEKVYSDHDIGNDDLLAEIYYHIAYTYFKLDNINKAIDYSYLAKEKYRQLNNKKEYANSL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
LLLSQQYSGKGEMDRAIRYSEKALNIFKEVDDVLYTSKIENNLGKLFYEFDNLEESFIHF
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRAKEIRESNKDPLLLETLINICENYIKQKDIHNCKLILDEIMNNLENGNEIALVDYYLL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHH
RHRVELLQGDLEEAESTLLMALNFVKNMQDKERIGEISIIIGKFYIDNGNDKEAAKYLNE
HHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEEEEEEECCCCCHHHHHHHHH
GVEMFKEVGLLKDM
HHHHHHHHHHHCCC
>Mature Secondary Structure
MEILSLGEKIKRRRKELNMTLKDLAGDRITPGQISLVESGKSNPSMDLLEYLAETLNTSI
CCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
EYFMESEDTQAEKICKYYENIAESHIINDNLNIAEQYIEKSLYYAEKYNLEYRKARNLYL
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
RGLIYMHKGDLPVAQQYLLSSNVIFIKNNNYEEIVNTFVNLGKITIFLKAYHSSCSYFQQ
HHEEEEECCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHH
AEKVYSDHDIGNDDLLAEIYYHIAYTYFKLDNINKAIDYSYLAKEKYRQLNNKKEYANSL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
LLLSQQYSGKGEMDRAIRYSEKALNIFKEVDDVLYTSKIENNLGKLFYEFDNLEESFIHF
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRAKEIRESNKDPLLLETLINICENYIKQKDIHNCKLILDEIMNNLENGNEIALVDYYLL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHH
RHRVELLQGDLEEAESTLLMALNFVKNMQDKERIGEISIIIGKFYIDNGNDKEAAKYLNE
HHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEEEEEEECCCCCHHHHHHHHH
GVEMFKEVGLLKDM
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA