Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755676

Identifier: 170755676

GI number: 170755676

Start: 3496807

End: 3497421

Strand: Reverse

Name: 170755676

Synonym: CLD_1313

Alternate gene names: NA

Gene position: 3497421-3496807 (Counterclockwise)

Preceding gene: 170755056

Following gene: 170754875

Centisome position: 88.36

GC content: 23.09

Gene sequence:

>615_bases
ATGCCTAAAGCCTTAATAGGAACTGCCATTTCAGCTACAGCTATAATAATAGGGGCTATAATAGGTGGAATATGGAGTTC
GTGCATTAATAAAAAAACTATTACTAAGAATGAAGAAATACAAAAGCATATATTAGAAGAAAATAAAAAAATAGATAAGG
TATACTATAAAGATAAATTTAAGGAAAGTGGAAGAACCGTAAGATTAGATATATGTACAGCAATTTTTGAGGGAATAAGA
ACTATAAAAAAAATTAAGCAAAATAAAGAAGAATATTATCCTGTTTGCATTTCTATAAATAGAAATTATTATAGAGATAT
AGCTGTATTAACTAAAAAATTTACTTTAAGAGAAATAAGCTATATAAATCAATTATATGGAATAATAGATAAGATAAATT
ATGATGTAAAGAAGATAGATTATAGCAATAAGAATAGTTGGCTCAATATATTGGTAGATTATGAAATACTGTTAAAAAAA
GTATATGGAAATAATTACAAGAAAATATTAGAGGTAGATATAGAAGAATGTAATTATGATAACTTAATAGATAACAATAT
AATAAAGGAAGGATATAGAGATGTTCTTATAAAGTTAAATAATATTATAGAATAA

Upstream 100 bases:

>100_bases
TTATCATAGTTATTAATGTAATATTAATACTTTTTATAAAAATATAATTATTTCAATTAATATTTTCGGATTGGAAACTT
AATAGAAAGGATGTATTGTT

Downstream 100 bases:

>100_bases
TTGTGCACATTATAAACGAAATGTTACTAATATATAAATAAATAGTAAATGTTTGGGAATTTATATTGAAGTAATTTAAA
TGTAAATTATACTTATATAT

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MPKALIGTAISATAIIIGAIIGGIWSSCINKKTITKNEEIQKHILEENKKIDKVYYKDKFKESGRTVRLDICTAIFEGIR
TIKKIKQNKEEYYPVCISINRNYYRDIAVLTKKFTLREISYINQLYGIIDKINYDVKKIDYSNKNSWLNILVDYEILLKK
VYGNNYKKILEVDIEECNYDNLIDNNIIKEGYRDVLIKLNNIIE

Sequences:

>Translated_204_residues
MPKALIGTAISATAIIIGAIIGGIWSSCINKKTITKNEEIQKHILEENKKIDKVYYKDKFKESGRTVRLDICTAIFEGIR
TIKKIKQNKEEYYPVCISINRNYYRDIAVLTKKFTLREISYINQLYGIIDKINYDVKKIDYSNKNSWLNILVDYEILLKK
VYGNNYKKILEVDIEECNYDNLIDNNIIKEGYRDVLIKLNNIIE
>Mature_203_residues
PKALIGTAISATAIIIGAIIGGIWSSCINKKTITKNEEIQKHILEENKKIDKVYYKDKFKESGRTVRLDICTAIFEGIRT
IKKIKQNKEEYYPVCISINRNYYRDIAVLTKKFTLREISYINQLYGIIDKINYDVKKIDYSNKNSWLNILVDYEILLKKV
YGNNYKKILEVDIEECNYDNLIDNNIIKEGYRDVLIKLNNIIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23860; Mature: 23729

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKALIGTAISATAIIIGAIIGGIWSSCINKKTITKNEEIQKHILEENKKIDKVYYKDKF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH
KESGRTVRLDICTAIFEGIRTIKKIKQNKEEYYPVCISINRNYYRDIAVLTKKFTLREIS
HHCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
YINQLYGIIDKINYDVKKIDYSNKNSWLNILVDYEILLKKVYGNNYKKILEVDIEECNYD
HHHHHHHHHHHHCCCHHEECCCCCCCEEEEEEHHHHHHHHHHCCCCHHHHEEEHHHCCCC
NLIDNNIIKEGYRDVLIKLNNIIE
CCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PKALIGTAISATAIIIGAIIGGIWSSCINKKTITKNEEIQKHILEENKKIDKVYYKDKF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH
KESGRTVRLDICTAIFEGIRTIKKIKQNKEEYYPVCISINRNYYRDIAVLTKKFTLREIS
HHCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
YINQLYGIIDKINYDVKKIDYSNKNSWLNILVDYEILLKKVYGNNYKKILEVDIEECNYD
HHHHHHHHHHHHCCCHHEECCCCCCCEEEEEEHHHHHHHHHHCCCCHHHHEEEHHHCCCC
NLIDNNIIKEGYRDVLIKLNNIIE
CCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA