| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755673
Identifier: 170755673
GI number: 170755673
Start: 3310873
End: 3311010
Strand: Reverse
Name: 170755673
Synonym: CLD_1475
Alternate gene names: NA
Gene position: 3311010-3310873 (Counterclockwise)
Preceding gene: 170757328
Following gene: 170754837
Centisome position: 83.65
GC content: 33.33
Gene sequence:
>138_bases ATGAAACATATAAAAACTATAAACAAAGCAAACATAAAAAACAGCTTACAAAAACCAGGCTGCAAAGAATGTGCAAATTC TTGCCAATCAGCATGCAAAACTTCTTGCACAGTAGCGAACTTAGCTTGTGAAAACTAA
Upstream 100 bases:
>100_bases TTAATATTTAGAATGATTTGGGGTAATGGAAACTTTATTTTATCCATAAATTATGATATAATCAAACAGAAAGTAAGTAG GTAGATTGGAGGAATACTTA
Downstream 100 bases:
>100_bases TATAAGCTAAAAGCAGTAACTTTAAAGTTACTGCTTTATATTTACTGAAAATAAATGTATAATATAAATGTTTTAATAAA TAATAAGTCCTATATTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 45; Mature: 45
Protein sequence:
>45_residues MKHIKTINKANIKNSLQKPGCKECANSCQSACKTSCTVANLACEN
Sequences:
>Translated_45_residues MKHIKTINKANIKNSLQKPGCKECANSCQSACKTSCTVANLACEN >Mature_45_residues MKHIKTINKANIKNSLQKPGCKECANSCQSACKTSCTVANLACEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4828; Mature: 4828
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
13.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 15.6 %Cys+Met (Translated Protein) 13.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 15.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHIKTINKANIKNSLQKPGCKECANSCQSACKTSCTVANLACEN CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHCCCC >Mature Secondary Structure MKHIKTINKANIKNSLQKPGCKECANSCQSACKTSCTVANLACEN CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA