| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755659
Identifier: 170755659
GI number: 170755659
Start: 870978
End: 871607
Strand: Direct
Name: 170755659
Synonym: CLD_0009
Alternate gene names: NA
Gene position: 870978-871607 (Clockwise)
Preceding gene: 170754810
Following gene: 170756698
Centisome position: 22.0
GC content: 32.06
Gene sequence:
>630_bases ATGATCTTCGGTGGTGATTATGTAGGGAAAACTAGTGCAGAATCCTGTGTCTCTGCTGTGAAGAATCAATTTAGTGGAAC TCCCTCCATATTAGCAAAAGGTAACCATGATAAGAGTAAGGGAGGAAAATATGATTCTGGATTAGTTGTTAACAATGACG ATTATGCTATATATGTAATGGATTCATCAAGCAAGTCCTTTACAAGTAGCGATATGAAAAATCTTAAATCTTCTTTGGAT CAAATAAATTCATCTAAGCCGGTTTTTGTTGTTTCTCATTGCCCTATTCATTATTTTGGGAAAAGAACCATTGGAAATGC AGAAAAACTCCTTTCTCTTCTGAATAATCATAAAAACGTAATATTCCTTTGGGGACATAATCATTCTAAAAAAGACTCAA ATTATGGTACAGTTAAAGTGAAAGGTGATACAATACAATGTTCCAAGTCTTCTTCAGCAGTTCCTATTAATTTCACATAT GCAAATATGGGAGCAATGAATCAAGGAAATAATGGAGCATACGGATTACTTATGAATTTAATAAATAGCAGTGGTAATAC AAATATTAAATTCTATTATAAAGATCTTTCAGGCAAAACTGTTTCAAATTATTCTGTGGATATCAGTTAA
Upstream 100 bases:
>100_bases TACAAGATATATTGGAGTTACTTCAGATGTTCACAATAATATTCCCAATTTGACAAAATGGCTATCTAATTTGGAAAGTA CTACAACATCAATGGATTAT
Downstream 100 bases:
>100_bases CAGGTATTATCTATATTAATGAAACAAAAAGGTCACATATTGGGTTAAGATTCCAAAATGTGACCTTTTTTTGTATTTAG AAAACCACCTTCTACCTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MIFGGDYVGKTSAESCVSAVKNQFSGTPSILAKGNHDKSKGGKYDSGLVVNNDDYAIYVMDSSSKSFTSSDMKNLKSSLD QINSSKPVFVVSHCPIHYFGKRTIGNAEKLLSLLNNHKNVIFLWGHNHSKKDSNYGTVKVKGDTIQCSKSSSAVPINFTY ANMGAMNQGNNGAYGLLMNLINSSGNTNIKFYYKDLSGKTVSNYSVDIS
Sequences:
>Translated_209_residues MIFGGDYVGKTSAESCVSAVKNQFSGTPSILAKGNHDKSKGGKYDSGLVVNNDDYAIYVMDSSSKSFTSSDMKNLKSSLD QINSSKPVFVVSHCPIHYFGKRTIGNAEKLLSLLNNHKNVIFLWGHNHSKKDSNYGTVKVKGDTIQCSKSSSAVPINFTY ANMGAMNQGNNGAYGLLMNLINSSGNTNIKFYYKDLSGKTVSNYSVDIS >Mature_209_residues MIFGGDYVGKTSAESCVSAVKNQFSGTPSILAKGNHDKSKGGKYDSGLVVNNDDYAIYVMDSSSKSFTSSDMKNLKSSLD QINSSKPVFVVSHCPIHYFGKRTIGNAEKLLSLLNNHKNVIFLWGHNHSKKDSNYGTVKVKGDTIQCSKSSSAVPINFTY ANMGAMNQGNNGAYGLLMNLINSSGNTNIKFYYKDLSGKTVSNYSVDIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22644; Mature: 22644
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFGGDYVGKTSAESCVSAVKNQFSGTPSILAKGNHDKSKGGKYDSGLVVNNDDYAIYVM CEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEECCCEEEEEE DSSSKSFTSSDMKNLKSSLDQINSSKPVFVVSHCPIHYFGKRTIGNAEKLLSLLNNHKNV ECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCCCHHHHHHHHHCCCCE IFLWGHNHSKKDSNYGTVKVKGDTIQCSKSSSAVPINFTYANMGAMNQGNNGAYGLLMNL EEEECCCCCCCCCCCCEEEEECCEEEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHH INSSGNTNIKFYYKDLSGKTVSNYSVDIS HHCCCCCEEEEEEEECCCCEECCEEEEEC >Mature Secondary Structure MIFGGDYVGKTSAESCVSAVKNQFSGTPSILAKGNHDKSKGGKYDSGLVVNNDDYAIYVM CEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEECCCEEEEEE DSSSKSFTSSDMKNLKSSLDQINSSKPVFVVSHCPIHYFGKRTIGNAEKLLSLLNNHKNV ECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCCCHHHHHHHHHCCCCE IFLWGHNHSKKDSNYGTVKVKGDTIQCSKSSSAVPINFTYANMGAMNQGNNGAYGLLMNL EEEECCCCCCCCCCCCEEEEECCEEEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHH INSSGNTNIKFYYKDLSGKTVSNYSVDIS HHCCCCCEEEEEEEECCCCEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA