| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is plsC [H]
Identifier: 170755655
GI number: 170755655
Start: 526978
End: 527700
Strand: Direct
Name: plsC [H]
Synonym: CLD_0327
Alternate gene names: 170755655
Gene position: 526978-527700 (Clockwise)
Preceding gene: 170755629
Following gene: 170757427
Centisome position: 13.31
GC content: 30.43
Gene sequence:
>723_bases ATGAAGTCATTTATTTTTTATTTAGGTTTTGGATTTTATATGCTACTATCCCTTTTAAGAATAATAAAATTAAAATATTT AAAGAGAAAAGGTAATAAAGAAGAAATAGATAGATATATTAATAAAAGCGTTGTAGGCTGGGCAAATTTCATAGTCAATG GTATAGGAATAAAAATAAATAAAAAAGGATTAGAGAATGTACCTGATGGGCCTTGCTTATTTGTAGGAAACCATCAAGGA TTGTTAGATGTGCCAGTTGTAGTTTCATCCTTAGATAGATATGTGGGCTTTGTAGCTAAAAAGGAAATGCTAAAACTTAA AATATTAACTTACTGGATGAAAGAAATGAAATGTGTTTTTATGGATAGACAAAACGTTAGAGCAGCAGTAAAGACCATAA ATGAAGGTGTAGAAAATTTAAAAAATGGATATAGCATGCTGATATTCCCAGAAGGTACAAGAAGTAGAGGAGAAAATTTA GGGGAATTTAAAAAGGGAAGTATGAAATTAGGTATAAAAGCAGGGGTACCAATAGTGCCTATAGCTATTAATGGTACCTA TAATGTGCTGGAGGCCAATGGAAGAAAGATAAAAGCCGCGGATGTAGATTTAATAATATGTCCACCGATATATCCTAATG AACTCTCTAAAGAGGAACAAAATAATTTATCTGCAACTATTAAAGATATTATACAAAAGGAGCTAGAAAAAGCAAGAAAT TAA
Upstream 100 bases:
>100_bases CATTATTTAATTCTAACATAAATTAACCAAAAGTAGATAAGTTTTTTTATATATATTATAATAATAAAGTGAAGTTACAT AATAAAAGGAGAGAATTATA
Downstream 100 bases:
>100_bases GAGGAGAGTGTCTCAAAATAGATTTAATTTTGAGGCATTCTCTTTTTTTTTTATTATTAAGTGATTCTTAGTTAAGGTGG ACTTTTATTAGAATAATTAT
Product: putative 1-acyl-sn-glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MKSFIFYLGFGFYMLLSLLRIIKLKYLKRKGNKEEIDRYINKSVVGWANFIVNGIGIKINKKGLENVPDGPCLFVGNHQG LLDVPVVVSSLDRYVGFVAKKEMLKLKILTYWMKEMKCVFMDRQNVRAAVKTINEGVENLKNGYSMLIFPEGTRSRGENL GEFKKGSMKLGIKAGVPIVPIAINGTYNVLEANGRKIKAADVDLIICPPIYPNELSKEEQNNLSATIKDIIQKELEKARN
Sequences:
>Translated_240_residues MKSFIFYLGFGFYMLLSLLRIIKLKYLKRKGNKEEIDRYINKSVVGWANFIVNGIGIKINKKGLENVPDGPCLFVGNHQG LLDVPVVVSSLDRYVGFVAKKEMLKLKILTYWMKEMKCVFMDRQNVRAAVKTINEGVENLKNGYSMLIFPEGTRSRGENL GEFKKGSMKLGIKAGVPIVPIAINGTYNVLEANGRKIKAADVDLIICPPIYPNELSKEEQNNLSATIKDIIQKELEKARN >Mature_240_residues MKSFIFYLGFGFYMLLSLLRIIKLKYLKRKGNKEEIDRYINKSVVGWANFIVNGIGIKINKKGLENVPDGPCLFVGNHQG LLDVPVVVSSLDRYVGFVAKKEMLKLKILTYWMKEMKCVFMDRQNVRAAVKTINEGVENLKNGYSMLIFPEGTRSRGENL GEFKKGSMKLGIKAGVPIVPIAINGTYNVLEANGRKIKAADVDLIICPPIYPNELSKEEQNNLSATIKDIIQKELEKARN
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI5453718, Length=178, Percent_Identity=25.8426966292135, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI15100175, Length=178, Percent_Identity=25.8426966292135, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI6041665, Length=183, Percent_Identity=27.8688524590164, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1789395, Length=171, Percent_Identity=30.4093567251462, Blast_Score=80, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17564032, Length=235, Percent_Identity=22.9787234042553, Blast_Score=71, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6320151, Length=178, Percent_Identity=28.0898876404494, Blast_Score=83, Evalue=4e-17, Organism=Drosophila melanogaster, GI24641614, Length=189, Percent_Identity=25.3968253968254, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24641612, Length=189, Percent_Identity=25.3968253968254, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI281364648, Length=243, Percent_Identity=23.4567901234568, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24582856, Length=243, Percent_Identity=23.4567901234568, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24582854, Length=243, Percent_Identity=23.4567901234568, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 27077; Mature: 27077
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSFIFYLGFGFYMLLSLLRIIKLKYLKRKGNKEEIDRYINKSVVGWANFIVNGIGIKIN CCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE KKGLENVPDGPCLFVGNHQGLLDVPVVVSSLDRYVGFVAKKEMLKLKILTYWMKEMKCVF CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MDRQNVRAAVKTINEGVENLKNGYSMLIFPEGTRSRGENLGEFKKGSMKLGIKAGVPIVP HCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHCCCCEEEEEECCCCEEE IAINGTYNVLEANGRKIKAADVDLIICPPIYPNELSKEEQNNLSATIKDIIQKELEKARN EEECCCEEEEECCCCEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSFIFYLGFGFYMLLSLLRIIKLKYLKRKGNKEEIDRYINKSVVGWANFIVNGIGIKIN CCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE KKGLENVPDGPCLFVGNHQGLLDVPVVVSSLDRYVGFVAKKEMLKLKILTYWMKEMKCVF CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MDRQNVRAAVKTINEGVENLKNGYSMLIFPEGTRSRGENLGEFKKGSMKLGIKAGVPIVP HCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHCCCCEEEEEECCCCEEE IAINGTYNVLEANGRKIKAADVDLIICPPIYPNELSKEEQNNLSATIKDIIQKELEKARN EEECCCEEEEECCCCEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7569993; 8253680 [H]