| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755634
Identifier: 170755634
GI number: 170755634
Start: 1140052
End: 1140498
Strand: Direct
Name: 170755634
Synonym: CLD_3537
Alternate gene names: NA
Gene position: 1140052-1140498 (Clockwise)
Preceding gene: 170756921
Following gene: 170756135
Centisome position: 28.8
GC content: 27.96
Gene sequence:
>447_bases ATGAATAACTATGAAGAAGCGGTGAAGGATTTAGCTCCTTGTGGAAATGATTGTTCAAGATGTGCAAGTTATGAGAACAG TAAAATAGTTTTATTGAGCAAAGAACTTAGTGAAAGTTTAGTAGGATTTGAAAATATGGCTAAAAAAATAAAAGACTTTA TGCCTATATTTAATCACTATGAAGAATTTTTAGCGATTTTAGATCATTTTTCAAAAGGAAATTGTAAAGGGTGTCGTTTT AATGATAAACCTACATGTCAATGCAGTATAAATGTTTGTCATAAAAAAGAAAAAGTAAATTTTTGTTTTGAGTGCTCTAA ATATTCTTGCAATCCAACAACATACAATGAATCTCTTACTAAAGTATGGCGAGATAATAATGATGATATGAAAAAAATGG GTGTGGATAATTTCTATATTTCCCAAAAAGAAAAACCAAGATATTAA
Upstream 100 bases:
>100_bases AAAATTAGATAAAATTATTTATAAAACGTGACTTTCCTCTTTTTATTGCATCTATATAAGTGAAAGAAAATATTTTTATG TTATAAGAGGAGGAATGGTT
Downstream 100 bases:
>100_bases TTGAGCAAAGGTTTAGTGAGCTTTTTTCATTAAAAGATAGGAGAAAGTAGAATCTTTAAATAATAGGGATTCTACTTCTT TTTTATTTTATAATATGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MNNYEEAVKDLAPCGNDCSRCASYENSKIVLLSKELSESLVGFENMAKKIKDFMPIFNHYEEFLAILDHFSKGNCKGCRF NDKPTCQCSINVCHKKEKVNFCFECSKYSCNPTTYNESLTKVWRDNNDDMKKMGVDNFYISQKEKPRY
Sequences:
>Translated_148_residues MNNYEEAVKDLAPCGNDCSRCASYENSKIVLLSKELSESLVGFENMAKKIKDFMPIFNHYEEFLAILDHFSKGNCKGCRF NDKPTCQCSINVCHKKEKVNFCFECSKYSCNPTTYNESLTKVWRDNNDDMKKMGVDNFYISQKEKPRY >Mature_148_residues MNNYEEAVKDLAPCGNDCSRCASYENSKIVLLSKELSESLVGFENMAKKIKDFMPIFNHYEEFLAILDHFSKGNCKGCRF NDKPTCQCSINVCHKKEKVNFCFECSKYSCNPTTYNESLTKVWRDNNDDMKKMGVDNFYISQKEKPRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17212; Mature: 17212
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 10.8 %Cys+Met (Translated Protein) 7.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 10.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNYEEAVKDLAPCGNDCSRCASYENSKIVLLSKELSESLVGFENMAKKIKDFMPIFNHY CCCHHHHHHHHCCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEFLAILDHFSKGNCKGCRFNDKPTCQCSINVCHKKEKVNFCFECSKYSCNPTTYNESLT HHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHCHHHCCEEEECCCCCCCCCCHHHHHH KVWRDNNDDMKKMGVDNFYISQKEKPRY HHHCCCCHHHHHHCCCCEEECCCCCCCC >Mature Secondary Structure MNNYEEAVKDLAPCGNDCSRCASYENSKIVLLSKELSESLVGFENMAKKIKDFMPIFNHY CCCHHHHHHHHCCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEFLAILDHFSKGNCKGCRFNDKPTCQCSINVCHKKEKVNFCFECSKYSCNPTTYNESLT HHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHCHHHCCEEEECCCCCCCCCCHHHHHH KVWRDNNDDMKKMGVDNFYISQKEKPRY HHHCCCCHHHHHHCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA