| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755579
Identifier: 170755579
GI number: 170755579
Start: 755493
End: 756101
Strand: Direct
Name: 170755579
Synonym: CLD_0126
Alternate gene names: NA
Gene position: 755493-756101 (Clockwise)
Preceding gene: 170755268
Following gene: 170756869
Centisome position: 19.09
GC content: 25.78
Gene sequence:
>609_bases ATGAATAATGAACTTAAATTTTCTAAATTAGTCACTGAAGCTAATTCTTGTTTCAGTGCTAAAAATTATAAAAAGTCTGC TGAATTATATGATGATGCATTAAGTCTTTCACCAATCTTTAAAGATATAAAAAGTGTTAGAAAAAATTTATCTAAAGCAA AAATATTAAATGAATCAAGTAATAACTTTAATGAAGGTATGGAGCATTTTAAGAATAAAAATTATGAATCTGCAATGTAT CTATTTAGTAAAATATCGAAAGAAGATGCACAAAATTATAAAGAAGCAATAAAGGAAATTGAAGAGAGTAAGCCACTTTT GACCAAACATATGATAGAAGAAGCTAATAAAGAAGCATCAAATAATAAATTTGGTAATGCGCTTTCTTTTATAAACCAAG GTTTAGCAAATGATCCTAATAATAAAGAATTAATTAGTTTAAAAAATAAATATGAAAAAGAAAATGATGTTATACAAGCA GCTCAAGATAAAGCTAACGCAGAAGCTGAAGCTGAAAAATATAAACCTAAAAGAATAACAAAATCAGACTGGATAGTTAG CAGTCCTCCAATAAGGATGTTTACGAAAATCATAATCATAATTGTTTAG
Upstream 100 bases:
>100_bases ATTGGTATCTTTGCATCTTATACGGCAATTAGAAAAACTAAAAATACTATTATTTACAATATTATTTTTTGTATTAATAA TAGTTATTACAATACCAATC
Downstream 100 bases:
>100_bases TCTATAGCCGAACGATGACCGATGAATTGTAAATAATCTTTATTGGAGGATTTGCTTTATGGTAAAGTTTGAATTTGAAT ACACAGAAATTGATGGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide Repeat Protein
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MNNELKFSKLVTEANSCFSAKNYKKSAELYDDALSLSPIFKDIKSVRKNLSKAKILNESSNNFNEGMEHFKNKNYESAMY LFSKISKEDAQNYKEAIKEIEESKPLLTKHMIEEANKEASNNKFGNALSFINQGLANDPNNKELISLKNKYEKENDVIQA AQDKANAEAEAEKYKPKRITKSDWIVSSPPIRMFTKIIIIIV
Sequences:
>Translated_202_residues MNNELKFSKLVTEANSCFSAKNYKKSAELYDDALSLSPIFKDIKSVRKNLSKAKILNESSNNFNEGMEHFKNKNYESAMY LFSKISKEDAQNYKEAIKEIEESKPLLTKHMIEEANKEASNNKFGNALSFINQGLANDPNNKELISLKNKYEKENDVIQA AQDKANAEAEAEKYKPKRITKSDWIVSSPPIRMFTKIIIIIV >Mature_202_residues MNNELKFSKLVTEANSCFSAKNYKKSAELYDDALSLSPIFKDIKSVRKNLSKAKILNESSNNFNEGMEHFKNKNYESAMY LFSKISKEDAQNYKEAIKEIEESKPLLTKHMIEEANKEASNNKFGNALSFINQGLANDPNNKELISLKNKYEKENDVIQA AQDKANAEAEAEKYKPKRITKSDWIVSSPPIRMFTKIIIIIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23083; Mature: 23083
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNELKFSKLVTEANSCFSAKNYKKSAELYDDALSLSPIFKDIKSVRKNLSKAKILNESS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NNFNEGMEHFKNKNYESAMYLFSKISKEDAQNYKEAIKEIEESKPLLTKHMIEEANKEAS CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC NNKFGNALSFINQGLANDPNNKELISLKNKYEKENDVIQAAQDKANAEAEAEKYKPKRIT CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCC KSDWIVSSPPIRMFTKIIIIIV CCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MNNELKFSKLVTEANSCFSAKNYKKSAELYDDALSLSPIFKDIKSVRKNLSKAKILNESS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NNFNEGMEHFKNKNYESAMYLFSKISKEDAQNYKEAIKEIEESKPLLTKHMIEEANKEAS CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC NNKFGNALSFINQGLANDPNNKELISLKNKYEKENDVIQAAQDKANAEAEAEKYKPKRIT CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCC KSDWIVSSPPIRMFTKIIIIIV CCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA