| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755555
Identifier: 170755555
GI number: 170755555
Start: 2171726
End: 2171947
Strand: Reverse
Name: 170755555
Synonym: CLD_2602
Alternate gene names: NA
Gene position: 2171947-2171726 (Counterclockwise)
Preceding gene: 170755885
Following gene: 170754262
Centisome position: 54.87
GC content: 31.53
Gene sequence:
>222_bases ATGGCAGATATTAAATTTGAAATAAAAGATAAACTAGGAGTTATTTCAGAATCACCAAAGGGCTGGACAAAGGAACTTAA TATTATTAGTTGGAATGGAAAACAGGCTAAATACGATCTAAGAGATTGGGCGCCGGAACATGAAAAAATGGGTAAAGGAG TTACCTTATCAGCTGAGGAATTAAAGAGTTTAAAAGAAATACTAAATAATATGGATTTATAA
Upstream 100 bases:
>100_bases AGATATCAGAAATAAATATTAAAAGAGATAAAAGAATAGTATAATAAGGTTTAGGATAATGAATTTATTCTTTATATTTA TAGCAAGAGGAGGAACAAAA
Downstream 100 bases:
>100_bases AATAATTTAATCCAATATATTGTTTGGATAATAAGTAAAATCGGAGTTATAGTGTTAAAGCTATTACTTCGATTTTATTA TGTCTTGTAACTGTATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MADIKFEIKDKLGVISESPKGWTKELNIISWNGKQAKYDLRDWAPEHEKMGKGVTLSAEELKSLKEILNNMDL
Sequences:
>Translated_73_residues MADIKFEIKDKLGVISESPKGWTKELNIISWNGKQAKYDLRDWAPEHEKMGKGVTLSAEELKSLKEILNNMDL >Mature_72_residues ADIKFEIKDKLGVISESPKGWTKELNIISWNGKQAKYDLRDWAPEHEKMGKGVTLSAEELKSLKEILNNMDL
Specific function: Unknown
COG id: COG4443
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017154 [H]
Pfam domain/function: PF09901 DUF2128 [H]
EC number: NA
Molecular weight: Translated: 8361; Mature: 8230
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIKFEIKDKLGVISESPKGWTKELNIISWNGKQAKYDLRDWAPEHEKMGKGVTLSAEE CCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCHHHCCCCCEECHHH LKSLKEILNNMDL HHHHHHHHHHCCC >Mature Secondary Structure ADIKFEIKDKLGVISESPKGWTKELNIISWNGKQAKYDLRDWAPEHEKMGKGVTLSAEE CCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCHHHCCCCCEECHHH LKSLKEILNNMDL HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]