| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is yecA [C]
Identifier: 170755554
GI number: 170755554
Start: 681981
End: 683117
Strand: Direct
Name: yecA [C]
Synonym: CLD_0193
Alternate gene names: 170755554
Gene position: 681981-683117 (Clockwise)
Preceding gene: 170754698
Following gene: 170755497
Centisome position: 17.23
GC content: 22.34
Gene sequence:
>1137_bases GTGAGTTGTAATAACATATTAGAATTGAATGAAAAAGATAATTTAGAAACATTATTAAATAATTTAACTAAAAATGATTT AACAGATATAAGAAAATCCTTAGATATAAAGGGAGCAAGTAAATTAAATAAAAAGGAACTAGTTCAGGTTTTAGAAAGTG AATTACAAAATAATTTAAATACAATAATGAGTAATATTGGATTCTATGAATATATTTTTTTAGATAGATATTTTGATGAG ATAGAATATATAAATAAAAATACAAATAAATTTGATAATGCAATTAATGATTTAAAGAAAAAAGGTATAATATTTGAAAT AAATGGTGACAAAAATAAAGTTGTTATACCAAAAGAATTAGAAGATAACATAAAAGAAAATTTTTTGGATAAGGAAGAAT TTAACTTAGGATTTTACATATCAAAGGATATACTTAAAGTAATTCAAGCTTTGCTTCATTATTATGGAGCTCTAAGTTTA GAAGAATTATATAAAATTATACATAGAATGTCTTCCAACTTAAAATATGGGAAAGATAAAAATATAGAAATAGAATTTGA TAGAAGTTACTTAACTAATTTATTAAGTGATAACAATAGAAGCTATTATGGAATAAAGAAACAAGACAATACTTATTATA TGGAAGATGTGATTAATTTATCTTATGTGCTACAAGGACATAAAGCAGTACAATACTTGGATTACAAAGAATTAAGTATT AATTATATAAGAAAGTTTAATAAAGAAGAATTTTATATAAAACCACTAGAAAAACTAAAAAAATACATGAAGGAAAATCT GAATCTTAAAGAAGAAAAGTCAAATGAAGTAATGTATTCTACAAGTTGCCTTATGAAAAATGCTTTTTCTGTAGATTATA TATTTGAAGATATAAAGGGCAGAATATACTTAAAGAATGAAGAAGTAGAAAGAGATATAAAGGATATTATAACTGAAATA AATAATAATATTGAAAAATGGTGTTTAAGAGGCCACAGTATAAAAGAAATAAAATCAAAAGAAGATAAAATATATGAAAA AGTAGAAAAGGTTAATAATAAGGGGAAAATAGGTAGAAATGATCCGTGTCCTTGTGGCAGTGGTAAAAAGTATAAAAAAT GTTGCTTAAATAAGTAG
Upstream 100 bases:
>100_bases TTATTATAGCCCTTGGTAATGTTGAAAAAAAGTTATTATTTATATACAATTAAAATTGTGTCATTATACAAAATAAAATA TACAGAATAGGAGAATGGTT
Downstream 100 bases:
>100_bases GAAAATTAAATAGATTTAATTTTAACATCAGAAAGATAAAAAATACACTTATAAACCAATTGATTTTGCTAAGAATTTTT AATTAGTCACATTAAGAAAT
Product: SecC motif-containing protein
Products: NA
Alternate protein names: SecC Motif Containing Protein
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MSCNNILELNEKDNLETLLNNLTKNDLTDIRKSLDIKGASKLNKKELVQVLESELQNNLNTIMSNIGFYEYIFLDRYFDE IEYINKNTNKFDNAINDLKKKGIIFEINGDKNKVVIPKELEDNIKENFLDKEEFNLGFYISKDILKVIQALLHYYGALSL EELYKIIHRMSSNLKYGKDKNIEIEFDRSYLTNLLSDNNRSYYGIKKQDNTYYMEDVINLSYVLQGHKAVQYLDYKELSI NYIRKFNKEEFYIKPLEKLKKYMKENLNLKEEKSNEVMYSTSCLMKNAFSVDYIFEDIKGRIYLKNEEVERDIKDIITEI NNNIEKWCLRGHSIKEIKSKEDKIYEKVEKVNNKGKIGRNDPCPCGSGKKYKKCCLNK
Sequences:
>Translated_378_residues MSCNNILELNEKDNLETLLNNLTKNDLTDIRKSLDIKGASKLNKKELVQVLESELQNNLNTIMSNIGFYEYIFLDRYFDE IEYINKNTNKFDNAINDLKKKGIIFEINGDKNKVVIPKELEDNIKENFLDKEEFNLGFYISKDILKVIQALLHYYGALSL EELYKIIHRMSSNLKYGKDKNIEIEFDRSYLTNLLSDNNRSYYGIKKQDNTYYMEDVINLSYVLQGHKAVQYLDYKELSI NYIRKFNKEEFYIKPLEKLKKYMKENLNLKEEKSNEVMYSTSCLMKNAFSVDYIFEDIKGRIYLKNEEVERDIKDIITEI NNNIEKWCLRGHSIKEIKSKEDKIYEKVEKVNNKGKIGRNDPCPCGSGKKYKKCCLNK >Mature_377_residues SCNNILELNEKDNLETLLNNLTKNDLTDIRKSLDIKGASKLNKKELVQVLESELQNNLNTIMSNIGFYEYIFLDRYFDEI EYINKNTNKFDNAINDLKKKGIIFEINGDKNKVVIPKELEDNIKENFLDKEEFNLGFYISKDILKVIQALLHYYGALSLE ELYKIIHRMSSNLKYGKDKNIEIEFDRSYLTNLLSDNNRSYYGIKKQDNTYYMEDVINLSYVLQGHKAVQYLDYKELSIN YIRKFNKEEFYIKPLEKLKKYMKENLNLKEEKSNEVMYSTSCLMKNAFSVDYIFEDIKGRIYLKNEEVERDIKDIITEIN NNIEKWCLRGHSIKEIKSKEDKIYEKVEKVNNKGKIGRNDPCPCGSGKKYKKCCLNK
Specific function: Unknown
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44738; Mature: 44607
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCNNILELNEKDNLETLLNNLTKNDLTDIRKSLDIKGASKLNKKELVQVLESELQNNLN CCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH TIMSNIGFYEYIFLDRYFDEIEYINKNTNKFDNAINDLKKKGIIFEINGDKNKVVIPKEL HHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCEEEECHHH EDNIKENFLDKEEFNLGFYISKDILKVIQALLHYYGALSLEELYKIIHRMSSNLKYGKDK HHHHHHHCCCHHHCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC NIEIEFDRSYLTNLLSDNNRSYYGIKKQDNTYYMEDVINLSYVLQGHKAVQYLDYKELSI CEEEEECHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHH NYIRKFNKEEFYIKPLEKLKKYMKENLNLKEEKSNEVMYSTSCLMKNAFSVDYIFEDIKG HHHHHCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHCCHHHHHHHHCCC RIYLKNEEVERDIKDIITEINNNIEKWCLRGHSIKEIKSKEDKIYEKVEKVNNKGKIGRN EEEEECHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC DPCPCGSGKKYKKCCLNK CCCCCCCCCHHHHHCCCC >Mature Secondary Structure SCNNILELNEKDNLETLLNNLTKNDLTDIRKSLDIKGASKLNKKELVQVLESELQNNLN CCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH TIMSNIGFYEYIFLDRYFDEIEYINKNTNKFDNAINDLKKKGIIFEINGDKNKVVIPKEL HHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCEEEECHHH EDNIKENFLDKEEFNLGFYISKDILKVIQALLHYYGALSLEELYKIIHRMSSNLKYGKDK HHHHHHHCCCHHHCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC NIEIEFDRSYLTNLLSDNNRSYYGIKKQDNTYYMEDVINLSYVLQGHKAVQYLDYKELSI CEEEEECHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHH NYIRKFNKEEFYIKPLEKLKKYMKENLNLKEEKSNEVMYSTSCLMKNAFSVDYIFEDIKG HHHHHCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHCCHHHHHHHHCCC RIYLKNEEVERDIKDIITEINNNIEKWCLRGHSIKEIKSKEDKIYEKVEKVNNKGKIGRN EEEEECHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC DPCPCGSGKKYKKCCLNK CCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA