Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is yecA [C]

Identifier: 170755554

GI number: 170755554

Start: 681981

End: 683117

Strand: Direct

Name: yecA [C]

Synonym: CLD_0193

Alternate gene names: 170755554

Gene position: 681981-683117 (Clockwise)

Preceding gene: 170754698

Following gene: 170755497

Centisome position: 17.23

GC content: 22.34

Gene sequence:

>1137_bases
GTGAGTTGTAATAACATATTAGAATTGAATGAAAAAGATAATTTAGAAACATTATTAAATAATTTAACTAAAAATGATTT
AACAGATATAAGAAAATCCTTAGATATAAAGGGAGCAAGTAAATTAAATAAAAAGGAACTAGTTCAGGTTTTAGAAAGTG
AATTACAAAATAATTTAAATACAATAATGAGTAATATTGGATTCTATGAATATATTTTTTTAGATAGATATTTTGATGAG
ATAGAATATATAAATAAAAATACAAATAAATTTGATAATGCAATTAATGATTTAAAGAAAAAAGGTATAATATTTGAAAT
AAATGGTGACAAAAATAAAGTTGTTATACCAAAAGAATTAGAAGATAACATAAAAGAAAATTTTTTGGATAAGGAAGAAT
TTAACTTAGGATTTTACATATCAAAGGATATACTTAAAGTAATTCAAGCTTTGCTTCATTATTATGGAGCTCTAAGTTTA
GAAGAATTATATAAAATTATACATAGAATGTCTTCCAACTTAAAATATGGGAAAGATAAAAATATAGAAATAGAATTTGA
TAGAAGTTACTTAACTAATTTATTAAGTGATAACAATAGAAGCTATTATGGAATAAAGAAACAAGACAATACTTATTATA
TGGAAGATGTGATTAATTTATCTTATGTGCTACAAGGACATAAAGCAGTACAATACTTGGATTACAAAGAATTAAGTATT
AATTATATAAGAAAGTTTAATAAAGAAGAATTTTATATAAAACCACTAGAAAAACTAAAAAAATACATGAAGGAAAATCT
GAATCTTAAAGAAGAAAAGTCAAATGAAGTAATGTATTCTACAAGTTGCCTTATGAAAAATGCTTTTTCTGTAGATTATA
TATTTGAAGATATAAAGGGCAGAATATACTTAAAGAATGAAGAAGTAGAAAGAGATATAAAGGATATTATAACTGAAATA
AATAATAATATTGAAAAATGGTGTTTAAGAGGCCACAGTATAAAAGAAATAAAATCAAAAGAAGATAAAATATATGAAAA
AGTAGAAAAGGTTAATAATAAGGGGAAAATAGGTAGAAATGATCCGTGTCCTTGTGGCAGTGGTAAAAAGTATAAAAAAT
GTTGCTTAAATAAGTAG

Upstream 100 bases:

>100_bases
TTATTATAGCCCTTGGTAATGTTGAAAAAAAGTTATTATTTATATACAATTAAAATTGTGTCATTATACAAAATAAAATA
TACAGAATAGGAGAATGGTT

Downstream 100 bases:

>100_bases
GAAAATTAAATAGATTTAATTTTAACATCAGAAAGATAAAAAATACACTTATAAACCAATTGATTTTGCTAAGAATTTTT
AATTAGTCACATTAAGAAAT

Product: SecC motif-containing protein

Products: NA

Alternate protein names: SecC Motif Containing Protein

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MSCNNILELNEKDNLETLLNNLTKNDLTDIRKSLDIKGASKLNKKELVQVLESELQNNLNTIMSNIGFYEYIFLDRYFDE
IEYINKNTNKFDNAINDLKKKGIIFEINGDKNKVVIPKELEDNIKENFLDKEEFNLGFYISKDILKVIQALLHYYGALSL
EELYKIIHRMSSNLKYGKDKNIEIEFDRSYLTNLLSDNNRSYYGIKKQDNTYYMEDVINLSYVLQGHKAVQYLDYKELSI
NYIRKFNKEEFYIKPLEKLKKYMKENLNLKEEKSNEVMYSTSCLMKNAFSVDYIFEDIKGRIYLKNEEVERDIKDIITEI
NNNIEKWCLRGHSIKEIKSKEDKIYEKVEKVNNKGKIGRNDPCPCGSGKKYKKCCLNK

Sequences:

>Translated_378_residues
MSCNNILELNEKDNLETLLNNLTKNDLTDIRKSLDIKGASKLNKKELVQVLESELQNNLNTIMSNIGFYEYIFLDRYFDE
IEYINKNTNKFDNAINDLKKKGIIFEINGDKNKVVIPKELEDNIKENFLDKEEFNLGFYISKDILKVIQALLHYYGALSL
EELYKIIHRMSSNLKYGKDKNIEIEFDRSYLTNLLSDNNRSYYGIKKQDNTYYMEDVINLSYVLQGHKAVQYLDYKELSI
NYIRKFNKEEFYIKPLEKLKKYMKENLNLKEEKSNEVMYSTSCLMKNAFSVDYIFEDIKGRIYLKNEEVERDIKDIITEI
NNNIEKWCLRGHSIKEIKSKEDKIYEKVEKVNNKGKIGRNDPCPCGSGKKYKKCCLNK
>Mature_377_residues
SCNNILELNEKDNLETLLNNLTKNDLTDIRKSLDIKGASKLNKKELVQVLESELQNNLNTIMSNIGFYEYIFLDRYFDEI
EYINKNTNKFDNAINDLKKKGIIFEINGDKNKVVIPKELEDNIKENFLDKEEFNLGFYISKDILKVIQALLHYYGALSLE
ELYKIIHRMSSNLKYGKDKNIEIEFDRSYLTNLLSDNNRSYYGIKKQDNTYYMEDVINLSYVLQGHKAVQYLDYKELSIN
YIRKFNKEEFYIKPLEKLKKYMKENLNLKEEKSNEVMYSTSCLMKNAFSVDYIFEDIKGRIYLKNEEVERDIKDIITEIN
NNIEKWCLRGHSIKEIKSKEDKIYEKVEKVNNKGKIGRNDPCPCGSGKKYKKCCLNK

Specific function: Unknown

COG id: COG0653

COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44738; Mature: 44607

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCNNILELNEKDNLETLLNNLTKNDLTDIRKSLDIKGASKLNKKELVQVLESELQNNLN
CCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
TIMSNIGFYEYIFLDRYFDEIEYINKNTNKFDNAINDLKKKGIIFEINGDKNKVVIPKEL
HHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCEEEECHHH
EDNIKENFLDKEEFNLGFYISKDILKVIQALLHYYGALSLEELYKIIHRMSSNLKYGKDK
HHHHHHHCCCHHHCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
NIEIEFDRSYLTNLLSDNNRSYYGIKKQDNTYYMEDVINLSYVLQGHKAVQYLDYKELSI
CEEEEECHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHH
NYIRKFNKEEFYIKPLEKLKKYMKENLNLKEEKSNEVMYSTSCLMKNAFSVDYIFEDIKG
HHHHHCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHCCHHHHHHHHCCC
RIYLKNEEVERDIKDIITEINNNIEKWCLRGHSIKEIKSKEDKIYEKVEKVNNKGKIGRN
EEEEECHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
DPCPCGSGKKYKKCCLNK
CCCCCCCCCHHHHHCCCC
>Mature Secondary Structure 
SCNNILELNEKDNLETLLNNLTKNDLTDIRKSLDIKGASKLNKKELVQVLESELQNNLN
CCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
TIMSNIGFYEYIFLDRYFDEIEYINKNTNKFDNAINDLKKKGIIFEINGDKNKVVIPKEL
HHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCEEEECHHH
EDNIKENFLDKEEFNLGFYISKDILKVIQALLHYYGALSLEELYKIIHRMSSNLKYGKDK
HHHHHHHCCCHHHCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
NIEIEFDRSYLTNLLSDNNRSYYGIKKQDNTYYMEDVINLSYVLQGHKAVQYLDYKELSI
CEEEEECHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHH
NYIRKFNKEEFYIKPLEKLKKYMKENLNLKEEKSNEVMYSTSCLMKNAFSVDYIFEDIKG
HHHHHCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHCCHHHHHHHHCCC
RIYLKNEEVERDIKDIITEINNNIEKWCLRGHSIKEIKSKEDKIYEKVEKVNNKGKIGRN
EEEEECHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
DPCPCGSGKKYKKCCLNK
CCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA