Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755552

Identifier: 170755552

GI number: 170755552

Start: 1204634

End: 1205029

Strand: Direct

Name: 170755552

Synonym: CLD_3480

Alternate gene names: NA

Gene position: 1204634-1205029 (Clockwise)

Preceding gene: 170755382

Following gene: 170754272

Centisome position: 30.43

GC content: 22.98

Gene sequence:

>396_bases
TTGAGAAAAAAACAAAATATATATAAAAGTAGTGAATATATTTATGTAAAAGATGATGAAAAAAGAAAAGCTAAGAGAAA
AGAATGTAATATATATATATACTATCCTAGAGTAAATAATAAAAGTATATATGAAAGTTATGGTGAAGATTTAGCCAAAA
TGGAAGTTATAGATATATCTAAATTTGGAGTTAAATTAAGAACTAAAATAAAGCTAAAGGAAGATGATTTTATAAACTTT
TCTTTAAGATTATCAGAAAAACCTTCCTTTTGGTGTATGGCTATAGTAAGAAGAGTAGAAAAATATGAAGATTATTTTAT
AATAGGATGCGAGTTTTTATCTTTAACATTAGAACAAATGAGAGATATAGAAAAATATGTATTGTCTATCAGGTGA

Upstream 100 bases:

>100_bases
CATTAAATGATATAATAATTATATAACATGTTTAATGTAATTTTAATTATTTAAGTTCTATGCTAGAGTTTAAGGGGCTA
AATTATAGAGGTGAAATAAA

Downstream 100 bases:

>100_bases
TTTTTAGATTCGGGTGGAGTTTCATTGGAAGAATTCCTTTGTTTTAACTAGGAGTTTTGCTAATGGAAATAATCGGATAA
GTTAATTAAAATAAAAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MRKKQNIYKSSEYIYVKDDEKRKAKRKECNIYIYYPRVNNKSIYESYGEDLAKMEVIDISKFGVKLRTKIKLKEDDFINF
SLRLSEKPSFWCMAIVRRVEKYEDYFIIGCEFLSLTLEQMRDIEKYVLSIR

Sequences:

>Translated_131_residues
MRKKQNIYKSSEYIYVKDDEKRKAKRKECNIYIYYPRVNNKSIYESYGEDLAKMEVIDISKFGVKLRTKIKLKEDDFINF
SLRLSEKPSFWCMAIVRRVEKYEDYFIIGCEFLSLTLEQMRDIEKYVLSIR
>Mature_131_residues
MRKKQNIYKSSEYIYVKDDEKRKAKRKECNIYIYYPRVNNKSIYESYGEDLAKMEVIDISKFGVKLRTKIKLKEDDFINF
SLRLSEKPSFWCMAIVRRVEKYEDYFIIGCEFLSLTLEQMRDIEKYVLSIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15960; Mature: 15960

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKQNIYKSSEYIYVKDDEKRKAKRKECNIYIYYPRVNNKSIYESYGEDLAKMEVIDIS
CCCCCCCCCCCCEEEEECCHHHHHHHCCCCEEEEEECCCCCHHHHHHCCHHHHEEEEEHH
KFGVKLRTKIKLKEDDFINFSLRLSEKPSFWCMAIVRRVEKYEDYFIIGCEFLSLTLEQM
HCCEEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
RDIEKYVLSIR
HHHHHHHHCCC
>Mature Secondary Structure
MRKKQNIYKSSEYIYVKDDEKRKAKRKECNIYIYYPRVNNKSIYESYGEDLAKMEVIDIS
CCCCCCCCCCCCEEEEECCHHHHHHHCCCCEEEEEECCCCCHHHHHHCCHHHHEEEEEHH
KFGVKLRTKIKLKEDDFINFSLRLSEKPSFWCMAIVRRVEKYEDYFIIGCEFLSLTLEQM
HCCEEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
RDIEKYVLSIR
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA