| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755552
Identifier: 170755552
GI number: 170755552
Start: 1204634
End: 1205029
Strand: Direct
Name: 170755552
Synonym: CLD_3480
Alternate gene names: NA
Gene position: 1204634-1205029 (Clockwise)
Preceding gene: 170755382
Following gene: 170754272
Centisome position: 30.43
GC content: 22.98
Gene sequence:
>396_bases TTGAGAAAAAAACAAAATATATATAAAAGTAGTGAATATATTTATGTAAAAGATGATGAAAAAAGAAAAGCTAAGAGAAA AGAATGTAATATATATATATACTATCCTAGAGTAAATAATAAAAGTATATATGAAAGTTATGGTGAAGATTTAGCCAAAA TGGAAGTTATAGATATATCTAAATTTGGAGTTAAATTAAGAACTAAAATAAAGCTAAAGGAAGATGATTTTATAAACTTT TCTTTAAGATTATCAGAAAAACCTTCCTTTTGGTGTATGGCTATAGTAAGAAGAGTAGAAAAATATGAAGATTATTTTAT AATAGGATGCGAGTTTTTATCTTTAACATTAGAACAAATGAGAGATATAGAAAAATATGTATTGTCTATCAGGTGA
Upstream 100 bases:
>100_bases CATTAAATGATATAATAATTATATAACATGTTTAATGTAATTTTAATTATTTAAGTTCTATGCTAGAGTTTAAGGGGCTA AATTATAGAGGTGAAATAAA
Downstream 100 bases:
>100_bases TTTTTAGATTCGGGTGGAGTTTCATTGGAAGAATTCCTTTGTTTTAACTAGGAGTTTTGCTAATGGAAATAATCGGATAA GTTAATTAAAATAAAAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MRKKQNIYKSSEYIYVKDDEKRKAKRKECNIYIYYPRVNNKSIYESYGEDLAKMEVIDISKFGVKLRTKIKLKEDDFINF SLRLSEKPSFWCMAIVRRVEKYEDYFIIGCEFLSLTLEQMRDIEKYVLSIR
Sequences:
>Translated_131_residues MRKKQNIYKSSEYIYVKDDEKRKAKRKECNIYIYYPRVNNKSIYESYGEDLAKMEVIDISKFGVKLRTKIKLKEDDFINF SLRLSEKPSFWCMAIVRRVEKYEDYFIIGCEFLSLTLEQMRDIEKYVLSIR >Mature_131_residues MRKKQNIYKSSEYIYVKDDEKRKAKRKECNIYIYYPRVNNKSIYESYGEDLAKMEVIDISKFGVKLRTKIKLKEDDFINF SLRLSEKPSFWCMAIVRRVEKYEDYFIIGCEFLSLTLEQMRDIEKYVLSIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15960; Mature: 15960
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKQNIYKSSEYIYVKDDEKRKAKRKECNIYIYYPRVNNKSIYESYGEDLAKMEVIDIS CCCCCCCCCCCCEEEEECCHHHHHHHCCCCEEEEEECCCCCHHHHHHCCHHHHEEEEEHH KFGVKLRTKIKLKEDDFINFSLRLSEKPSFWCMAIVRRVEKYEDYFIIGCEFLSLTLEQM HCCEEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH RDIEKYVLSIR HHHHHHHHCCC >Mature Secondary Structure MRKKQNIYKSSEYIYVKDDEKRKAKRKECNIYIYYPRVNNKSIYESYGEDLAKMEVIDIS CCCCCCCCCCCCEEEEECCHHHHHHHCCCCEEEEEECCCCCHHHHHHCCHHHHEEEEEHH KFGVKLRTKIKLKEDDFINFSLRLSEKPSFWCMAIVRRVEKYEDYFIIGCEFLSLTLEQM HCCEEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH RDIEKYVLSIR HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA