| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755417
Identifier: 170755417
GI number: 170755417
Start: 591193
End: 591741
Strand: Direct
Name: 170755417
Synonym: CLD_0270
Alternate gene names: NA
Gene position: 591193-591741 (Clockwise)
Preceding gene: 170755486
Following gene: 170756224
Centisome position: 14.94
GC content: 30.6
Gene sequence:
>549_bases ATGAAGAAATTAGAAGAGAAAATATTATATGAAGGTAAATGGATAAGTTTTAAGGAAATAAGTTATTTAAATAATGAAGA AAAGCTTTTAAAATGGGAAGCAGTAGAGAGAACCAATACGACTAAAGCTGTGGTTATTGTGGCAAAATTAGTTCCAACAG AGCGATATGTATTTATAAAACAATATAGACCAGCTATAGATAATTATGTTATAGGATTTCCTGCTGGATTATTAGAACAG GAAGATGTTGAAGCAGAGGCTAAAAGAGAATTAAAAGAAGAAACAGGCTATGTAGGTAGGGTTATAGACATAAGTCCAGA GATAAGACCTAACCCAGCTTTATTAACAGATTACACTATATTAGTTCAAATGGAGATTGATGAAAATGATGAATTAAATA AAAATCCTAAGCAAGAACTAGAACCTTCAGAGGATATAGAGGTTATGTTAGTGTCTAAAGAAGAAAGTAGAGACTTTTTA ATAGAACAAAAAAATAATGGAGTAGATGTGGGAGTAGGTCCTTGGTACATATTTGGATTTAAATTGTAA
Upstream 100 bases:
>100_bases ACCAATAAAACTTATAGTAGATCCTGCGGTACCAGGAGAGGGTGGAAGTAAAATAAGAATAGAGTATAGCTAGTAGTAGA TAATTTATGGAGGTAATTAG
Downstream 100 bases:
>100_bases TTAATTTTTTATTAAAATAATATAATTTTGTTTTTTATTTAAATAGAGGAAATAAGATGTTTCAAAATAAAATTTATTTT GAAACATCTTATTTTTTTTG
Product: NUDIX family hydrolase
Products: AMP; D-ribose 5-phosphate
Alternate protein names: MutT/Nudix Family Protein; Hydrolase; MutT/NUDIX Family Hydrolase; Hydrolase NUDIX Family
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MKKLEEKILYEGKWISFKEISYLNNEEKLLKWEAVERTNTTKAVVIVAKLVPTERYVFIKQYRPAIDNYVIGFPAGLLEQ EDVEAEAKRELKEETGYVGRVIDISPEIRPNPALLTDYTILVQMEIDENDELNKNPKQELEPSEDIEVMLVSKEESRDFL IEQKNNGVDVGVGPWYIFGFKL
Sequences:
>Translated_182_residues MKKLEEKILYEGKWISFKEISYLNNEEKLLKWEAVERTNTTKAVVIVAKLVPTERYVFIKQYRPAIDNYVIGFPAGLLEQ EDVEAEAKRELKEETGYVGRVIDISPEIRPNPALLTDYTILVQMEIDENDELNKNPKQELEPSEDIEVMLVSKEESRDFL IEQKNNGVDVGVGPWYIFGFKL >Mature_182_residues MKKLEEKILYEGKWISFKEISYLNNEEKLLKWEAVERTNTTKAVVIVAKLVPTERYVFIKQYRPAIDNYVIGFPAGLLEQ EDVEAEAKRELKEETGYVGRVIDISPEIRPNPALLTDYTILVQMEIDENDELNKNPKQELEPSEDIEVMLVSKEESRDFL IEQKNNGVDVGVGPWYIFGFKL
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI37594464, Length=190, Percent_Identity=33.1578947368421, Blast_Score=97, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17564994, Length=157, Percent_Identity=32.484076433121, Blast_Score=84, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6319587, Length=166, Percent_Identity=30.7228915662651, Blast_Score=81, Evalue=9e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.1.13
Molecular weight: Translated: 21128; Mature: 21128
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLEEKILYEGKWISFKEISYLNNEEKLLKWEAVERTNTTKAVVIVAKLVPTERYVFIK CCCHHHHHHCCCCCCEEEHHHHCCCHHHEEEEEECCCCCCCEEEEEEEEECCCCEEEEEE QYRPAIDNYVIGFPAGLLEQEDVEAEAKRELKEETGYVGRVIDISPEIRPNPALLTDYTI ECCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEE LVQMEIDENDELNKNPKQELEPSEDIEVMLVSKEESRDFLIEQKNNGVDVGVGPWYIFGF EEEEEECCCCCCCCCCHHHCCCCCCEEEEEEECCCCCCEEEEECCCCEEECCCCEEEEEE KL EC >Mature Secondary Structure MKKLEEKILYEGKWISFKEISYLNNEEKLLKWEAVERTNTTKAVVIVAKLVPTERYVFIK CCCHHHHHHCCCCCCEEEHHHHCCCHHHEEEEEECCCCCCCEEEEEEEEECCCCEEEEEE QYRPAIDNYVIGFPAGLLEQEDVEAEAKRELKEETGYVGRVIDISPEIRPNPALLTDYTI ECCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEE LVQMEIDENDELNKNPKQELEPSEDIEVMLVSKEESRDFLIEQKNNGVDVGVGPWYIFGF EEEEEECCCCCCCCCCHHHCCCCCCEEEEEEECCCCCCEEEEECCCCEEECCCCEEEEEE KL EC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ADPribose; H2O
Specific reaction: ADP-ribose + H2O = AMP + D-ribose 5-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA