Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755376

Identifier: 170755376

GI number: 170755376

Start: 2762600

End: 2763457

Strand: Reverse

Name: 170755376

Synonym: CLD_1979

Alternate gene names: NA

Gene position: 2763457-2762600 (Counterclockwise)

Preceding gene: 170755763

Following gene: 170755312

Centisome position: 69.82

GC content: 28.21

Gene sequence:

>858_bases
GTGAGTATAGTTCGATTATTTACATTACCAGGGGCGGGTTCTTCAGCAATAATGTATTACAAATGGATACCCATCATTGG
AAAGCAAATCAGACTAAGTCCATTAGAGATACCAGGCCGAGGAATTAAAGAGAGAGAAAAAAAAGCAGTAAGTCGTAGAA
ATCTTATAGATTTGTTATTTGAAGATGTTAAATTAAAGTTAAAGAATGATGAAGAGTATATGATATTAGGAAATAGTGCA
AGTTCAATTATAGCAATAGACCTATGTAGACTAATAGAGACGTATGAATTTAAAAGACCTAAGCACATTTTTATTGCTGT
GGAACCGCCACCGGGTATTTTGAAAAATAGAAAAAAAATGTTGGAAGATCCTAAGAGAAGGAATTTTGTGAAAAGTGTTT
TTGAAAAATATTTTCTTGATGATTTAATTACAAAAGAGGAATTAAATGAATTATTATCTGTATTTTTAAATATTGTTTAT
AACAACAGAGAAAAAATTTTAGATTTTTCTGCAGAAGATATGTATAAGGAGATATATGGAGATATAAAGATGATAAAAGG
GAAGAAATATAAAGCATTAGAATTTGCACTTGAACATATAAAGCTTTTTATTGAGGATGAAAAAATAACTTTAGAAGATG
AAATAAGTCTATTGCCTATCAATGTTGATTTAACTGTTTTCGGAGCTACTAATGATGAAGTAGCTAGTGAATTAGAATTA
ATGAAATGGAAGGAATATACATGTGCAAAGTTTGAGTTATATATGGTAGAAGGAGATCATTTGATTCTATTTAATAATAA
TGAAACTGTATTACAAAAGATACAGGAAAAAGCAGAAACTATATTAAAAAAAATTTGA

Upstream 100 bases:

>100_bases
ATATCTAAAATTTATGAAGAATTCAGTATAAAAAAACTCCTAAATTTAATACTAATATGATTATATCCAAGTTATTCTAT
TTTCAAGGAGGTGTGATGGT

Downstream 100 bases:

>100_bases
GGTGAATTATGAGATCAAGGATTAAGGGAGTAGGAAGATACTTACCAAATAGAATTGTAACTAGCGAGGAAGCAGAAGAA
CTTGCAGGTTTTAAAAAATT

Product: putative bacT protein

Products: NA

Alternate protein names: BacT Protein; Oleoyl-(Acyl-Carrier-Protein) Hydrolase; Linear Gramicidin Dehydrogenase LgrE

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSIVRLFTLPGAGSSAIMYYKWIPIIGKQIRLSPLEIPGRGIKEREKKAVSRRNLIDLLFEDVKLKLKNDEEYMILGNSA
SSIIAIDLCRLIETYEFKRPKHIFIAVEPPPGILKNRKKMLEDPKRRNFVKSVFEKYFLDDLITKEELNELLSVFLNIVY
NNREKILDFSAEDMYKEIYGDIKMIKGKKYKALEFALEHIKLFIEDEKITLEDEISLLPINVDLTVFGATNDEVASELEL
MKWKEYTCAKFELYMVEGDHLILFNNNETVLQKIQEKAETILKKI

Sequences:

>Translated_285_residues
MSIVRLFTLPGAGSSAIMYYKWIPIIGKQIRLSPLEIPGRGIKEREKKAVSRRNLIDLLFEDVKLKLKNDEEYMILGNSA
SSIIAIDLCRLIETYEFKRPKHIFIAVEPPPGILKNRKKMLEDPKRRNFVKSVFEKYFLDDLITKEELNELLSVFLNIVY
NNREKILDFSAEDMYKEIYGDIKMIKGKKYKALEFALEHIKLFIEDEKITLEDEISLLPINVDLTVFGATNDEVASELEL
MKWKEYTCAKFELYMVEGDHLILFNNNETVLQKIQEKAETILKKI
>Mature_284_residues
SIVRLFTLPGAGSSAIMYYKWIPIIGKQIRLSPLEIPGRGIKEREKKAVSRRNLIDLLFEDVKLKLKNDEEYMILGNSAS
SIIAIDLCRLIETYEFKRPKHIFIAVEPPPGILKNRKKMLEDPKRRNFVKSVFEKYFLDDLITKEELNELLSVFLNIVYN
NREKILDFSAEDMYKEIYGDIKMIKGKKYKALEFALEHIKLFIEDEKITLEDEISLLPINVDLTVFGATNDEVASELELM
KWKEYTCAKFELYMVEGDHLILFNNNETVLQKIQEKAETILKKI

Specific function: Unknown

COG id: COG3208

COG function: function code Q; Predicted thioesterase involved in non-ribosomal peptide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33293; Mature: 33161

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVRLFTLPGAGSSAIMYYKWIPIIGKQIRLSPLEIPGRGIKEREKKAVSRRNLIDLLF
CCEEEEEEECCCCCCEEEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
EDVKLKLKNDEEYMILGNSASSIIAIDLCRLIETYEFKRPKHIFIAVEPPPGILKNRKKM
HHHEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
LEDPKRRNFVKSVFEKYFLDDLITKEELNELLSVFLNIVYNNREKILDFSAEDMYKEIYG
HCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHC
DIKMIKGKKYKALEFALEHIKLFIEDEKITLEDEISLLPINVDLTVFGATNDEVASELEL
CEEEECCCCHHHHHHHHHHHHEEEECCEEEEECCCEEEEEEEEEEEEECCCHHHHHHHHH
MKWKEYTCAKFELYMVEGDHLILFNNNETVLQKIQEKAETILKKI
HHHCCCCEEEEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIVRLFTLPGAGSSAIMYYKWIPIIGKQIRLSPLEIPGRGIKEREKKAVSRRNLIDLLF
CEEEEEEECCCCCCEEEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
EDVKLKLKNDEEYMILGNSASSIIAIDLCRLIETYEFKRPKHIFIAVEPPPGILKNRKKM
HHHEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
LEDPKRRNFVKSVFEKYFLDDLITKEELNELLSVFLNIVYNNREKILDFSAEDMYKEIYG
HCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHC
DIKMIKGKKYKALEFALEHIKLFIEDEKITLEDEISLLPINVDLTVFGATNDEVASELEL
CEEEECCCCHHHHHHHHHHHHEEEECCEEEEECCCEEEEEEEEEEEEECCCHHHHHHHHH
MKWKEYTCAKFELYMVEGDHLILFNNNETVLQKIQEKAETILKKI
HHHCCCCEEEEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA