| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755298
Identifier: 170755298
GI number: 170755298
Start: 702990
End: 703487
Strand: Direct
Name: 170755298
Synonym: CLD_0171
Alternate gene names: NA
Gene position: 702990-703487 (Clockwise)
Preceding gene: 170754580
Following gene: 170756218
Centisome position: 17.76
GC content: 24.1
Gene sequence:
>498_bases ATGAGAGAAGACATAGAAATATATATGGCAGGGATAAGTGATATGGACAAGATAGCCGATCTCATAGTATCTATAAATGA AGAAAAGACGAAAATTACAAAATATGATGATTTTAATTTTTATCATTCTAAAAATTCTTTAAAGGAAGTTTTAAATGGTA AGAATAAAAATGAAATTATATTCATAGCTAGAAACAAAGAAAATTTTATAGGTATGATAAATCTGTCATTTAGTGATTCA GATTATATGTTTTTTATTGATAAGTTTATATATATAAAGTATTTGTATGTGGATAAAAATAAATTCACAGATACACAAGA GTATAAAGAGGCTACCCAAAAATTATTTGAAGCATCAATAAGTGAAGCTAAGAAGTATGGATTCAAGTATATATGTGGAG ATGTACTAAGTGAAGAAGAGGAATTAAGAGAATTATTTGAAGTGAATGATATGAAAAACTATAAAAATAGATTATATAAA AAAATAAATACTATGTAG
Upstream 100 bases:
>100_bases AAAAACTAAAAATTTCAAGCAAAGCAAAATGTTTAGCAATGAAAGTTTGTTAGAATTGTTATGATTTATACATTTTTAAT GATTTAAAGGAGAGGTGATT
Downstream 100 bases:
>100_bases ATCTTTTATTCATAGTTTAATTTAGGGAGAAATTATGAAAAAAATATTAAACAATGTATGGGAAGTAGCAAAACAATATA AAGGCAAAGAATTAATCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MREDIEIYMAGISDMDKIADLIVSINEEKTKITKYDDFNFYHSKNSLKEVLNGKNKNEIIFIARNKENFIGMINLSFSDS DYMFFIDKFIYIKYLYVDKNKFTDTQEYKEATQKLFEASISEAKKYGFKYICGDVLSEEEELRELFEVNDMKNYKNRLYK KINTM
Sequences:
>Translated_165_residues MREDIEIYMAGISDMDKIADLIVSINEEKTKITKYDDFNFYHSKNSLKEVLNGKNKNEIIFIARNKENFIGMINLSFSDS DYMFFIDKFIYIKYLYVDKNKFTDTQEYKEATQKLFEASISEAKKYGFKYICGDVLSEEEELRELFEVNDMKNYKNRLYK KINTM >Mature_165_residues MREDIEIYMAGISDMDKIADLIVSINEEKTKITKYDDFNFYHSKNSLKEVLNGKNKNEIIFIARNKENFIGMINLSFSDS DYMFFIDKFIYIKYLYVDKNKFTDTQEYKEATQKLFEASISEAKKYGFKYICGDVLSEEEELRELFEVNDMKNYKNRLYK KINTM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19744; Mature: 19744
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREDIEIYMAGISDMDKIADLIVSINEEKTKITKYDDFNFYHSKNSLKEVLNGKNKNEII CCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCCEEECHHHHHHHHCCCCCCEEE FIARNKENFIGMINLSFSDSDYMFFIDKFIYIKYLYVDKNKFTDTQEYKEATQKLFEASI EEEECCCCEEEEEEEEECCCCHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHH SEAKKYGFKYICGDVLSEEEELRELFEVNDMKNYKNRLYKKINTM HHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MREDIEIYMAGISDMDKIADLIVSINEEKTKITKYDDFNFYHSKNSLKEVLNGKNKNEII CCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCCEEECHHHHHHHHCCCCCCEEE FIARNKENFIGMINLSFSDSDYMFFIDKFIYIKYLYVDKNKFTDTQEYKEATQKLFEASI EEEECCCCEEEEEEEEECCCCHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHH SEAKKYGFKYICGDVLSEEEELRELFEVNDMKNYKNRLYKKINTM HHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA