| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755287
Identifier: 170755287
GI number: 170755287
Start: 2321432
End: 2321926
Strand: Reverse
Name: 170755287
Synonym: CLD_2453
Alternate gene names: NA
Gene position: 2321926-2321432 (Counterclockwise)
Preceding gene: 170756256
Following gene: 170757238
Centisome position: 58.66
GC content: 34.75
Gene sequence:
>495_bases ATGGCAGTTAGAAAAAGAAAAATACAAGCGAATTATTTGGAAGTAGCAAGTGTATTTGAGTTACTAGGTACAGGCTTTAC AGAACTTAACGAAAGCCCTAGCGCTCAAACAACTTCTAAAAGATATATAAATCAATCTAGTGCTAGCCAGAGTATTACTG GTTACGAATGGACAAGTGATTATACTGCTGACCAAATTAATAGTGAAAAGGCTATAGAATATATAAGAGAAATAGGAGAA ATGCAAAAAACGGGGCCAGATACTGAAGCAGATTATTTAATAGTAGATTTGGATAAACCTGCGTCAACAGAAGGAAGTTA TAGAGCTAGAAAAATAAAAGTTGCTATATCTGTAGATAGTTTTGAAAATAATGACGGAGATTTAGGAGTAACCGGTTCTT TCTTAGGAATTTCTGACCCTGTAGAGGGTACGTTTGATACAACTACCAAAAAATTTACTGAAGGTTTTACACCTAAAACA GCACAGGAGGGATAA
Upstream 100 bases:
>100_bases TAAAGTTACTAGCACTGGCTATGCTTTTGCCGTAACAGAGGATACGGCACAGTTTCAAATACAATTAAAGTTAAAGTATT TTAAGAAAGGAATGATATAA
Downstream 100 bases:
>100_bases TATATGAAATTATCAAAATTTAAATTTGATACTAATTTAGGTTTAGTAGAAATTGATGGAAAAAGAATCGATTTTGTAAC TGATGTAAATATAACTAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MAVRKRKIQANYLEVASVFELLGTGFTELNESPSAQTTSKRYINQSSASQSITGYEWTSDYTADQINSEKAIEYIREIGE MQKTGPDTEADYLIVDLDKPASTEGSYRARKIKVAISVDSFENNDGDLGVTGSFLGISDPVEGTFDTTTKKFTEGFTPKT AQEG
Sequences:
>Translated_164_residues MAVRKRKIQANYLEVASVFELLGTGFTELNESPSAQTTSKRYINQSSASQSITGYEWTSDYTADQINSEKAIEYIREIGE MQKTGPDTEADYLIVDLDKPASTEGSYRARKIKVAISVDSFENNDGDLGVTGSFLGISDPVEGTFDTTTKKFTEGFTPKT AQEG >Mature_163_residues AVRKRKIQANYLEVASVFELLGTGFTELNESPSAQTTSKRYINQSSASQSITGYEWTSDYTADQINSEKAIEYIREIGEM QKTGPDTEADYLIVDLDKPASTEGSYRARKIKVAISVDSFENNDGDLGVTGSFLGISDPVEGTFDTTTKKFTEGFTPKTA QEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18007; Mature: 17876
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVRKRKIQANYLEVASVFELLGTGFTELNESPSAQTTSKRYINQSSASQSITGYEWTSD CCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC YTADQINSEKAIEYIREIGEMQKTGPDTEADYLIVDLDKPASTEGSYRARKIKVAISVDS CCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEEEEC FENNDGDLGVTGSFLGISDPVEGTFDTTTKKFTEGFTPKTAQEG CCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure AVRKRKIQANYLEVASVFELLGTGFTELNESPSAQTTSKRYINQSSASQSITGYEWTSD CCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC YTADQINSEKAIEYIREIGEMQKTGPDTEADYLIVDLDKPASTEGSYRARKIKVAISVDS CCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEEEEC FENNDGDLGVTGSFLGISDPVEGTFDTTTKKFTEGFTPKTAQEG CCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA