Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170755276

Identifier: 170755276

GI number: 170755276

Start: 2419776

End: 2420135

Strand: Reverse

Name: 170755276

Synonym: CLD_2351

Alternate gene names: NA

Gene position: 2420135-2419776 (Counterclockwise)

Preceding gene: 170755782

Following gene: 170756345

Centisome position: 61.14

GC content: 31.39

Gene sequence:

>360_bases
ATGAAAATAGCAATTTCATCAACAGGAAAAACTATGGAAAACTCACTTGATATGAGGTTTGGAAGATGTGAATATTTTCA
AATTCATGATAGTGAAAGTAAAAAAGTTAAAATATTAGAAAATGAAGGCCAAAATGCAAGTGGTGGAGCAGGTATTATTG
CATCTAACCAACTAGTAGATGAAAAAGTAGATGTTATTATTACAGGAAGTCTTGGGCCTAATGCTTTTGAAATTATAGAA
AAGGCAGGTATTAAAGCTTATAAGTGTGAGCCTATAGCTATAACTTTAGTAATTGAAAAATATAATAAGGGTGAGATTGA
ACAAATAAGCATGTCTGGCCCTGCATATCATGGAATGTAA

Upstream 100 bases:

>100_bases
AAAGTGGCAAATGACAATATCTTTAATACGAGTATAAAAATTTAAGTAAGAGGCTTGAATTGATTATCCATTCTATAATA
AAAGATTTGGAGGAATAAAA

Downstream 100 bases:

>100_bases
TAGCAGAATGGAGATGAATATATATTGAATATAGCAGTACTTAGTGGAAAGGGAGGAACGGGTAAAACTACAGTATCTAC
AAATCTTGCCCTTGCATTAA

Product: dinitrogenase iron-molybdenum cofactor family protein

Products: NA

Alternate protein names: Dinitrogenase Iron-Molybdenum Cofactor Biosynthesis; Dinitrogenase Iron-Molybdenum Cofactor Protein; Dinitrogenase Iron-Molybdenum Cofactor Family Protein

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKIAISSTGKTMENSLDMRFGRCEYFQIHDSESKKVKILENEGQNASGGAGIIASNQLVDEKVDVIITGSLGPNAFEIIE
KAGIKAYKCEPIAITLVIEKYNKGEIEQISMSGPAYHGM

Sequences:

>Translated_119_residues
MKIAISSTGKTMENSLDMRFGRCEYFQIHDSESKKVKILENEGQNASGGAGIIASNQLVDEKVDVIITGSLGPNAFEIIE
KAGIKAYKCEPIAITLVIEKYNKGEIEQISMSGPAYHGM
>Mature_119_residues
MKIAISSTGKTMENSLDMRFGRCEYFQIHDSESKKVKILENEGQNASGGAGIIASNQLVDEKVDVIITGSLGPNAFEIIE
KAGIKAYKCEPIAITLVIEKYNKGEIEQISMSGPAYHGM

Specific function: Unknown

COG id: COG1433

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12941; Mature: 12941

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAISSTGKTMENSLDMRFGRCEYFQIHDSESKKVKILENEGQNASGGAGIIASNQLVD
CEEEECCCCCCCCCCCCCEECCEEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCC
EKVDVIITGSLGPNAFEIIEKAGIKAYKCEPIAITLVIEKYNKGEIEQISMSGPAYHGM
CCCCEEEECCCCCCHHHHHHHCCCEEEECCCEEEEEEEEECCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MKIAISSTGKTMENSLDMRFGRCEYFQIHDSESKKVKILENEGQNASGGAGIIASNQLVD
CEEEECCCCCCCCCCCCCEECCEEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCC
EKVDVIITGSLGPNAFEIIEKAGIKAYKCEPIAITLVIEKYNKGEIEQISMSGPAYHGM
CCCCEEEECCCCCCHHHHHHHCCCEEEECCCEEEEEEEEECCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA