| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755272
Identifier: 170755272
GI number: 170755272
Start: 1515313
End: 1515855
Strand: Direct
Name: 170755272
Synonym: CLD_3185
Alternate gene names: NA
Gene position: 1515313-1515855 (Clockwise)
Preceding gene: 170755533
Following gene: 170757350
Centisome position: 38.28
GC content: 28.91
Gene sequence:
>543_bases ATGCCGTCAACGGATACTGAATTCCAAGAACAGATGCAACAGCAAATGAAGCAAAGGCTTGAAAACTTACCTAGATTTAC TTATAAGGTTACAAGATTTTTTAAAAATAAAAGCGATTTACAGCAAGCCATTGATGATTTAAATAATGGAGGTATTCCTA ATCTTAGTAGCAAGAAACTTACGGATAATTATATAGAAGAAATATATGAAATGTGTTTCTTATTTAAAGTAGAGGGAAGA AAAATTTTAAAAGGGTTTATATATGGAGCCTTAATAGGTATAATTTTAGGAATATTGCAGGGAATTGGATTTTTAGCCTT TCCTATTTTAAATCCTATTTCAGCGGGAGGAATGATAGTTTCAACATTAATAATCTCACTGATTATATCTGTAATATGTG GAGGTTTCACGGCTATAGTTTTGCTTTTTAGACCTATAAAGAAAGTAGATTCATCCTTTTACATGCTTACGGTTTATTCA GATTATGAAAATAAACAAAATATAGAGGACACATTAAATAAACATATAAATTTTGAAATATAA
Upstream 100 bases:
>100_bases ATAATAATCATGGATGGATAATAGGAAATAGTGATTATATTAGTGATATGAATCAAGATAAAATTGATAGTCTTTTAGAA AGTGAAAGGAGTAATAGATA
Downstream 100 bases:
>100_bases ATTTGCTATTAATATTTTATTAAGAATTATATAAGCATAACTAATTTTTGTAATTATGTTTATGTATCTTCAATTATTGT TTGATATTAATAATTAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MPSTDTEFQEQMQQQMKQRLENLPRFTYKVTRFFKNKSDLQQAIDDLNNGGIPNLSSKKLTDNYIEEIYEMCFLFKVEGR KILKGFIYGALIGIILGILQGIGFLAFPILNPISAGGMIVSTLIISLIISVICGGFTAIVLLFRPIKKVDSSFYMLTVYS DYENKQNIEDTLNKHINFEI
Sequences:
>Translated_180_residues MPSTDTEFQEQMQQQMKQRLENLPRFTYKVTRFFKNKSDLQQAIDDLNNGGIPNLSSKKLTDNYIEEIYEMCFLFKVEGR KILKGFIYGALIGIILGILQGIGFLAFPILNPISAGGMIVSTLIISLIISVICGGFTAIVLLFRPIKKVDSSFYMLTVYS DYENKQNIEDTLNKHINFEI >Mature_179_residues PSTDTEFQEQMQQQMKQRLENLPRFTYKVTRFFKNKSDLQQAIDDLNNGGIPNLSSKKLTDNYIEEIYEMCFLFKVEGRK ILKGFIYGALIGIILGILQGIGFLAFPILNPISAGGMIVSTLIISLIISVICGGFTAIVLLFRPIKKVDSSFYMLTVYSD YENKQNIEDTLNKHINFEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20507; Mature: 20376
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSTDTEFQEQMQQQMKQRLENLPRFTYKVTRFFKNKSDLQQAIDDLNNGGIPNLSSKKL CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHH TDNYIEEIYEMCFLFKVEGRKILKGFIYGALIGIILGILQGIGFLAFPILNPISAGGMIV HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH STLIISLIISVICGGFTAIVLLFRPIKKVDSSFYMLTVYSDYENKQNIEDTLNKHINFEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure PSTDTEFQEQMQQQMKQRLENLPRFTYKVTRFFKNKSDLQQAIDDLNNGGIPNLSSKKL CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHH TDNYIEEIYEMCFLFKVEGRKILKGFIYGALIGIILGILQGIGFLAFPILNPISAGGMIV HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH STLIISLIISVICGGFTAIVLLFRPIKKVDSSFYMLTVYSDYENKQNIEDTLNKHINFEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA