| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755232
Identifier: 170755232
GI number: 170755232
Start: 3431845
End: 3432960
Strand: Reverse
Name: 170755232
Synonym: CLD_1368
Alternate gene names: NA
Gene position: 3432960-3431845 (Counterclockwise)
Preceding gene: 170754226
Following gene: 170756704
Centisome position: 86.73
GC content: 25.9
Gene sequence:
>1116_bases ATGAATAATAAAGAAAAGGCATTGATATATCCTTATGATAGAGAATTTTCTACAATAATAAGACATCAAAGTATATGTAA TTATGAAATTGTTGAAGTTGTAGCTCCTAATGGATGGGGACTTAGTGAGAAGGATGCTAGCTATGCTGATGGAGGACAAG CTTTAAATATTATTGTAAATAATAATTTCGAAAGTACGCTTAATAATTGTGATACTTTAATATTAAGTAATTCAGCTTTA AAGTTAGATTTTAAGGAAAGTATATACCCTAAAGTTGTACAGGCTGCAGAAAAAAATAAAAAAATTATTTCTACAGCAAA ATTTGATATTAAAGAAATTGAAATGATAGAGGAAGTGTGTAAATATAAAGGTAATATTTTTATTCAGTATCCTTTAAATA AAAATTATGAAATATGTAGTTATGTTGATAAACTAGAAATTCAAGAAATCAAAACACCAGTAATATTTGTGATGGGAGTA GGAGAAAATGCTCACAAATTTGAAATTCAACTTTCTGTAAGAGAAAATTTATTTAATATGGGCTATAAGGTAAGTCAAGT AGGTTCAAGGAACTATTGTGAAATGTTTAATTTTCATTCCTTTCCTGAGTTCATGTATAGTAATATGTATTCAGAGACTG AAAAGATCAAGCTATTTAATAATTTTATTAAGAATATTGAGAATCAAGAAAATCCAGATGTAATAATAATAGGTATACCT GGTACTATAATGAGAATCAATAATAAAGCTACTTATGATTTTGGAGTTTTAGCTTTTGAGGTATCACAAGCTGTTAAACC AGACGCATCAATTCTTAGTGTACTATACGAAAATTACTTGCCATCATTCTTTGAAAAAATAGCTCAAGAAGTAAAATACA AATTTGTTTGTGATATAAGTTGTTTTAATTATGTTAATTCAATGATTGATTGGAATTATTTTGAGATTAATACTGAAGCA AAATATATAGATGTTACTTTAGATTTAGTAAACAATAAAATAAAGGAACTAAACAATAGTATACCAATATTTAATATTAT GAATGAAAATGAAGGGTTAAAAATCACAGAACATTTAGTTAATAAACTTGCATGTGAAGAATACGAAGTTTTATAG
Upstream 100 bases:
>100_bases GAAGAAATGTTTAAAGTATATTGTACAATGATGGAATTTGGATATAAATTTGAAGAATAATAGAGTAATATATAATATGT GTAATATGGAGGCTTATTAA
Downstream 100 bases:
>100_bases ATCACTTATTAATAATAAAAAATTAAGTAATTAGTTTGCTATGCAAGGCTTATTGTTAAGATATATTCTAGTATCCATTT TAGAAACACGTAACTCATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MNNKEKALIYPYDREFSTIIRHQSICNYEIVEVVAPNGWGLSEKDASYADGGQALNIIVNNNFESTLNNCDTLILSNSAL KLDFKESIYPKVVQAAEKNKKIISTAKFDIKEIEMIEEVCKYKGNIFIQYPLNKNYEICSYVDKLEIQEIKTPVIFVMGV GENAHKFEIQLSVRENLFNMGYKVSQVGSRNYCEMFNFHSFPEFMYSNMYSETEKIKLFNNFIKNIENQENPDVIIIGIP GTIMRINNKATYDFGVLAFEVSQAVKPDASILSVLYENYLPSFFEKIAQEVKYKFVCDISCFNYVNSMIDWNYFEINTEA KYIDVTLDLVNNKIKELNNSIPIFNIMNENEGLKITEHLVNKLACEEYEVL
Sequences:
>Translated_371_residues MNNKEKALIYPYDREFSTIIRHQSICNYEIVEVVAPNGWGLSEKDASYADGGQALNIIVNNNFESTLNNCDTLILSNSAL KLDFKESIYPKVVQAAEKNKKIISTAKFDIKEIEMIEEVCKYKGNIFIQYPLNKNYEICSYVDKLEIQEIKTPVIFVMGV GENAHKFEIQLSVRENLFNMGYKVSQVGSRNYCEMFNFHSFPEFMYSNMYSETEKIKLFNNFIKNIENQENPDVIIIGIP GTIMRINNKATYDFGVLAFEVSQAVKPDASILSVLYENYLPSFFEKIAQEVKYKFVCDISCFNYVNSMIDWNYFEINTEA KYIDVTLDLVNNKIKELNNSIPIFNIMNENEGLKITEHLVNKLACEEYEVL >Mature_371_residues MNNKEKALIYPYDREFSTIIRHQSICNYEIVEVVAPNGWGLSEKDASYADGGQALNIIVNNNFESTLNNCDTLILSNSAL KLDFKESIYPKVVQAAEKNKKIISTAKFDIKEIEMIEEVCKYKGNIFIQYPLNKNYEICSYVDKLEIQEIKTPVIFVMGV GENAHKFEIQLSVRENLFNMGYKVSQVGSRNYCEMFNFHSFPEFMYSNMYSETEKIKLFNNFIKNIENQENPDVIIIGIP GTIMRINNKATYDFGVLAFEVSQAVKPDASILSVLYENYLPSFFEKIAQEVKYKFVCDISCFNYVNSMIDWNYFEINTEA KYIDVTLDLVNNKIKELNNSIPIFNIMNENEGLKITEHLVNKLACEEYEVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42910; Mature: 42910
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNKEKALIYPYDREFSTIIRHQSICNYEIVEVVAPNGWGLSEKDASYADGGQALNIIVN CCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEE NNFESTLNNCDTLILSNSALKLDFKESIYPKVVQAAEKNKKIISTAKFDIKEIEMIEEVC CCHHHHHCCCCEEEEECCEEEEEHHHHHHHHHHHHHHCCCCEEEHHCCCHHHHHHHHHHH KYKGNIFIQYPLNKNYEICSYVDKLEIQEIKTPVIFVMGVGENAHKFEIQLSVRENLFNM HCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEEEHHHHHHC GYKVSQVGSRNYCEMFNFHSFPEFMYSNMYSETEKIKLFNNFIKNIENQENPDVIIIGIP CEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC GTIMRINNKATYDFGVLAFEVSQAVKPDASILSVLYENYLPSFFEKIAQEVKYKFVCDIS CEEEEECCCCCEEHEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHH CFNYVNSMIDWNYFEINTEAKYIDVTLDLVNNKIKELNNSIPIFNIMNENEGLKITEHLV HHHHHHHHHCCCEEEECCCCEEEEEEHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHH NKLACEEYEVL HHHHHHHHCCC >Mature Secondary Structure MNNKEKALIYPYDREFSTIIRHQSICNYEIVEVVAPNGWGLSEKDASYADGGQALNIIVN CCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEE NNFESTLNNCDTLILSNSALKLDFKESIYPKVVQAAEKNKKIISTAKFDIKEIEMIEEVC CCHHHHHCCCCEEEEECCEEEEEHHHHHHHHHHHHHHCCCCEEEHHCCCHHHHHHHHHHH KYKGNIFIQYPLNKNYEICSYVDKLEIQEIKTPVIFVMGVGENAHKFEIQLSVRENLFNM HCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEEEHHHHHHC GYKVSQVGSRNYCEMFNFHSFPEFMYSNMYSETEKIKLFNNFIKNIENQENPDVIIIGIP CEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC GTIMRINNKATYDFGVLAFEVSQAVKPDASILSVLYENYLPSFFEKIAQEVKYKFVCDIS CEEEEECCCCCEEHEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHH CFNYVNSMIDWNYFEINTEAKYIDVTLDLVNNKIKELNNSIPIFNIMNENEGLKITEHLV HHHHHHHHHCCCEEEECCCCEEEEEEHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHH NKLACEEYEVL HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA