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The map label for this gene is frlC [C]

Identifier: 170755171

GI number: 170755171

Start: 2286292

End: 2287149

Strand: Reverse

Name: frlC [C]

Synonym: CLD_2492

Alternate gene names: 170755171

Gene position: 2287149-2286292 (Counterclockwise)

Preceding gene: 170755975

Following gene: 170754337

Centisome position: 57.78

GC content: 25.99

Gene sequence:

>858_bases
ATGTTAAAGTTTGCTTATAATACAAATGGATTAAGAAATATGCCATTAGAAGAAGCTATAAAACAAATATCAAATCATAA
CTATGATGGAATAGAAATATCTTTGCACAAACAACATTTTCATCCATTAAATATTAATATAGAAGAAGTAAAAAAAATAA
AATCAACATTAAAAAGTTCTGGATTAGTTCTATCTGATATAGCAACAGGTTGTGATGATATTTTAAGTGATGATAAGTTT
GAACCATCTATAATTTGTAAGGATTCTATTGGGAGAAAAAAACGTATTGAATTGCTTATTAAAACAGCTGAATTTGCTGA
ATATTTAGGTGTTGATGTAATTAATTTTGCCACAGGGTTTAAATCTGACAAAGTTTCCAACAGTGAAGCATACGACTATT
TGAAACAAGGGATAAATTATTTATTAGTAAAATGCCCAAACACAACATTTGCCTTAGAACCTGAACCTGGTATGTTTATT
GAAAAAACGGAACAAGCTATAAAGTTAATTAATGAAATAAATAATCCAAGACTAATGTTAAACTTAGATATTGGACATGT
ATATTGTTGTGAAGAAAATCCAATTTTATTTATTAGAAAAAGTATTCCTTATACAAGGCATATCCATATAGAAGATATTA
AAAATAGAGTTCATTATCATCAAATACCAGGCACAGGAGATATTGATTTTAATACAATTTTTAAAGATTTAATTAAGTAT
AATTATCAGCATTATATTAGTGTAGAATTATATCATCATGCTGATGATTGGAATAATGCTTTAGACAAGAGTATAAAATA
CTTGAAACAAATAGAACAGCATATAAGAATAGTTGATAGTATGGAATTAGTACAATAA

Upstream 100 bases:

>100_bases
TAGAAGAAACTTGTTAATTTTAGTGAATTTATTATAAAAATATACTACATTTAGAAGCTTAAAAAAGGATATTTGATTTC
AAAATTTAAAGGAGGAGAAT

Downstream 100 bases:

>100_bases
AGTTAAATGATTATGAATGGAACTTTATAAAATCTATAATAGAGTAATCATTAATTTTATAAAAAGTTGGAAGAAGGAGT
TATTATGAAGGGATTGAAAT

Product: AP endonuclease

Products: NA

Alternate protein names: Isomerase; Xylose Isomerase Domain Protein TIM Barrel; Sugar Phosphate Isomerase/Epimerase; Abasic Site Repairing; Xylose Isomerase-Like TIM Barrel; Xylose Isomerase Domain Protein Tim Barrel; AP Endonuclease; Sugar Phosphate Isomerases/Epimerases; Endonuclease

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MLKFAYNTNGLRNMPLEEAIKQISNHNYDGIEISLHKQHFHPLNINIEEVKKIKSTLKSSGLVLSDIATGCDDILSDDKF
EPSIICKDSIGRKKRIELLIKTAEFAEYLGVDVINFATGFKSDKVSNSEAYDYLKQGINYLLVKCPNTTFALEPEPGMFI
EKTEQAIKLINEINNPRLMLNLDIGHVYCCEENPILFIRKSIPYTRHIHIEDIKNRVHYHQIPGTGDIDFNTIFKDLIKY
NYQHYISVELYHHADDWNNALDKSIKYLKQIEQHIRIVDSMELVQ

Sequences:

>Translated_285_residues
MLKFAYNTNGLRNMPLEEAIKQISNHNYDGIEISLHKQHFHPLNINIEEVKKIKSTLKSSGLVLSDIATGCDDILSDDKF
EPSIICKDSIGRKKRIELLIKTAEFAEYLGVDVINFATGFKSDKVSNSEAYDYLKQGINYLLVKCPNTTFALEPEPGMFI
EKTEQAIKLINEINNPRLMLNLDIGHVYCCEENPILFIRKSIPYTRHIHIEDIKNRVHYHQIPGTGDIDFNTIFKDLIKY
NYQHYISVELYHHADDWNNALDKSIKYLKQIEQHIRIVDSMELVQ
>Mature_285_residues
MLKFAYNTNGLRNMPLEEAIKQISNHNYDGIEISLHKQHFHPLNINIEEVKKIKSTLKSSGLVLSDIATGCDDILSDDKF
EPSIICKDSIGRKKRIELLIKTAEFAEYLGVDVINFATGFKSDKVSNSEAYDYLKQGINYLLVKCPNTTFALEPEPGMFI
EKTEQAIKLINEINNPRLMLNLDIGHVYCCEENPILFIRKSIPYTRHIHIEDIKNRVHYHQIPGTGDIDFNTIFKDLIKY
NYQHYISVELYHHADDWNNALDKSIKYLKQIEQHIRIVDSMELVQ

Specific function: Not Clear, May Be Involved In An Isomerization Step. [C]

COG id: COG3622

COG function: function code G; Hydroxypyruvate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33013; Mature: 33013

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKFAYNTNGLRNMPLEEAIKQISNHNYDGIEISLHKQHFHPLNINIEEVKKIKSTLKSS
CEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHC
GLVLSDIATGCDDILSDDKFEPSIICKDSIGRKKRIELLIKTAEFAEYLGVDVINFATGF
CEEEEHHHCCHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCC
KSDKVSNSEAYDYLKQGINYLLVKCPNTTFALEPEPGMFIEKTEQAIKLINEINNPRLML
CCCCCCCHHHHHHHHHCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
NLDIGHVYCCEENPILFIRKSIPYTRHIHIEDIKNRVHYHQIPGTGDIDFNTIFKDLIKY
EECCCEEEEECCCCEEEEEECCCCEEEEEHHHHHCCCEEEECCCCCCCCHHHHHHHHHHC
NYQHYISVELYHHADDWNNALDKSIKYLKQIEQHIRIVDSMELVQ
CCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKFAYNTNGLRNMPLEEAIKQISNHNYDGIEISLHKQHFHPLNINIEEVKKIKSTLKSS
CEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHC
GLVLSDIATGCDDILSDDKFEPSIICKDSIGRKKRIELLIKTAEFAEYLGVDVINFATGF
CEEEEHHHCCHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCC
KSDKVSNSEAYDYLKQGINYLLVKCPNTTFALEPEPGMFIEKTEQAIKLINEINNPRLML
CCCCCCCHHHHHHHHHCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
NLDIGHVYCCEENPILFIRKSIPYTRHIHIEDIKNRVHYHQIPGTGDIDFNTIFKDLIKY
EECCCEEEEECCCCEEEEEECCCCEEEEEHHHHHCCCEEEECCCCCCCCHHHHHHHHHHC
NYQHYISVELYHHADDWNNALDKSIKYLKQIEQHIRIVDSMELVQ
CCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA