| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755140
Identifier: 170755140
GI number: 170755140
Start: 1132904
End: 1133461
Strand: Direct
Name: 170755140
Synonym: CLD_3546
Alternate gene names: NA
Gene position: 1132904-1133461 (Clockwise)
Preceding gene: 170755993
Following gene: 170755061
Centisome position: 28.62
GC content: 28.67
Gene sequence:
>558_bases ATGAAAAAAGGCTTTAAAATTATGAAAAGAGTTTTTCTTAGCTTTATAGTGTTGCTAATTTCAGTAATGTTATTATTTTC TTGGTTTGTAAAAGGAAATAGTAAGGATTATGGTGAGAATTCTAAAGTATTGAAGTCAGATAAGGTAAGTAATAAAAAGG CTTTAGTAGTATATCAACCATCTAAAAGTAAGTTAACTGAAAAAATTGCCAAGCAAATTGCCCAGGGAATAAAGGATGAA GACTATGAAGTTACTATTAATTATCCCGGAAAGCATATGATAGAGGATATTTCACAATATTCTATTATAGTCTTTGGATC GCCAGTTTATGTTGGAGAAACATCATCTACTTTAGCTGATTATATGAAATCTATAAAAGATTTTTCTAATAAAAAAATAC TTTTATTTGTTACTGGTGCTCAGCTAGAAAATAATGAATTGGACAAAATGGAAAAAAATCTTAGAAAGATAAAAGATACA GAAAAAGTAGGGTTTAAGAACGGAATGGATGATGAAAGTAAAGCTTATGAAACAGGAAAGAGAATTGCAGGAGAATAG
Upstream 100 bases:
>100_bases AATTTCATTGACAAACAAGTATAAATAATTATAAAATAACATTGAACAATGTTTAATTACATTACGGCGTTTAATTATAT TTGTAAATAAGAGGTGAAAA
Downstream 100 bases:
>100_bases ATTATGAAGATACCAAGATGTATACCGAATATTTTAACTGGATTACGTATAATATTAACTTTTATCTATTTATTGCTTTT GGATAATTTGAATCTTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MKKGFKIMKRVFLSFIVLLISVMLLFSWFVKGNSKDYGENSKVLKSDKVSNKKALVVYQPSKSKLTEKIAKQIAQGIKDE DYEVTINYPGKHMIEDISQYSIIVFGSPVYVGETSSTLADYMKSIKDFSNKKILLFVTGAQLENNELDKMEKNLRKIKDT EKVGFKNGMDDESKAYETGKRIAGE
Sequences:
>Translated_185_residues MKKGFKIMKRVFLSFIVLLISVMLLFSWFVKGNSKDYGENSKVLKSDKVSNKKALVVYQPSKSKLTEKIAKQIAQGIKDE DYEVTINYPGKHMIEDISQYSIIVFGSPVYVGETSSTLADYMKSIKDFSNKKILLFVTGAQLENNELDKMEKNLRKIKDT EKVGFKNGMDDESKAYETGKRIAGE >Mature_185_residues MKKGFKIMKRVFLSFIVLLISVMLLFSWFVKGNSKDYGENSKVLKSDKVSNKKALVVYQPSKSKLTEKIAKQIAQGIKDE DYEVTINYPGKHMIEDISQYSIIVFGSPVYVGETSSTLADYMKSIKDFSNKKILLFVTGAQLENNELDKMEKNLRKIKDT EKVGFKNGMDDESKAYETGKRIAGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21019; Mature: 21019
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGFKIMKRVFLSFIVLLISVMLLFSWFVKGNSKDYGENSKVLKSDKVSNKKALVVYQP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCEEEEECC SKSKLTEKIAKQIAQGIKDEDYEVTINYPGKHMIEDISQYSIIVFGSPVYVGETSSTLAD CHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCEEEEECCEEEECCCHHHHHH YMKSIKDFSNKKILLFVTGAQLENNELDKMEKNLRKIKDTEKVGFKNGMDDESKAYETGK HHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RIAGE HCCCC >Mature Secondary Structure MKKGFKIMKRVFLSFIVLLISVMLLFSWFVKGNSKDYGENSKVLKSDKVSNKKALVVYQP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCEEEEECC SKSKLTEKIAKQIAQGIKDEDYEVTINYPGKHMIEDISQYSIIVFGSPVYVGETSSTLAD CHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCEEEEECCEEEECCCHHHHHH YMKSIKDFSNKKILLFVTGAQLENNELDKMEKNLRKIKDTEKVGFKNGMDDESKAYETGK HHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RIAGE HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA