Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755128

Identifier: 170755128

GI number: 170755128

Start: 1238635

End: 1239594

Strand: Direct

Name: 170755128

Synonym: CLD_3450

Alternate gene names: NA

Gene position: 1238635-1239594 (Clockwise)

Preceding gene: 170754336

Following gene: 170756428

Centisome position: 31.29

GC content: 26.04

Gene sequence:

>960_bases
GTGTTAAATTTTAAAAGGCTAACTATTAATGACAAAAAATTATTTGAAAGTTATATAAAACCATATAATTTTTTAAATTG
CGAGTATTCTTTTACAACTTTATATATTTGGAGAAAGGCTTTAGATATAAAGTACGCTATATATAAAGGAGCTCTTATTA
TTAAAAAGAAGGATTTTAACGATGAATATCATTTTATGCAACCTTTAGGATATAAGAAAGAAAATTTAAAGGATATAATA
GAAACTTTAATGGGGTATAAAAAAGAAAAATGCATTAAATATCTCTTTAAAGATTTAAGATATGATTTTGTTAAAGAGTT
AAAAAATCTATACAAAGATGAAGAAATTTATAGTAATATAATGGTAGAAGAGGATAGGGATAACTTTGATTATTTATATG
AGAGTAAAAAACTTATAACTTTGTCAGGTAAAAAACTTCATGGCAAAAAGAATCACTATAACTATTTTATAAAAAATTAT
AACTATGATATAAGGGATTTTACAGAAGAAGGAGTTATAGAAGATAGCTTAAGAATTGCTGAGTTATGGTATGAAAAAAA
TGATACAAAGGATAAGCATTTACTTTATGAGCTTCAAAGCATAAGAGATATGTGTTATAACATGGATGTTTTAGGATTAG
AAGGCATGGGATTATATATAGACGGGGAAATTGCAGGCTTTAGTATAGGAGAAAAATTTAGTGATAATATGGCTATTGTG
CACATAGAAAAAGCTAATAAGGATCTTAGAGGAGCTTATACCTTTGTAAATAAAGCTTTCGTTGAAAATTATTTTAGTGA
TATACCTATAATAAATAGGGAACAAGATTTAGGCATAGAAGGACTAAGAAAAGCTAAATTATCCTATTCACCCCTAGATT
TTGAAAAAAAATATATGGTGGATATATGTTATAACTGCGGATGTAGTGATAGGGAAGAAAGACAAAGACAGATTATATAA

Upstream 100 bases:

>100_bases
CTCTTCTTAATCAATAATCAATATTTGAAGGGTTATTTTTTTAATATTAAAGTAGAGTAAGTTACTAGGAAATAAATATA
TTATTAAAAGAGGGGATAAT

Downstream 100 bases:

>100_bases
AAAATACTACAGTTATTTCGATTATAGGTAGTGTATATAAAAGATTTAAAAGAAAACTATGCATTAGGTAATTTATAAAA
TATTAAGGAAAGGAATGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MLNFKRLTINDKKLFESYIKPYNFLNCEYSFTTLYIWRKALDIKYAIYKGALIIKKKDFNDEYHFMQPLGYKKENLKDII
ETLMGYKKEKCIKYLFKDLRYDFVKELKNLYKDEEIYSNIMVEEDRDNFDYLYESKKLITLSGKKLHGKKNHYNYFIKNY
NYDIRDFTEEGVIEDSLRIAELWYEKNDTKDKHLLYELQSIRDMCYNMDVLGLEGMGLYIDGEIAGFSIGEKFSDNMAIV
HIEKANKDLRGAYTFVNKAFVENYFSDIPIINREQDLGIEGLRKAKLSYSPLDFEKKYMVDICYNCGCSDREERQRQII

Sequences:

>Translated_319_residues
MLNFKRLTINDKKLFESYIKPYNFLNCEYSFTTLYIWRKALDIKYAIYKGALIIKKKDFNDEYHFMQPLGYKKENLKDII
ETLMGYKKEKCIKYLFKDLRYDFVKELKNLYKDEEIYSNIMVEEDRDNFDYLYESKKLITLSGKKLHGKKNHYNYFIKNY
NYDIRDFTEEGVIEDSLRIAELWYEKNDTKDKHLLYELQSIRDMCYNMDVLGLEGMGLYIDGEIAGFSIGEKFSDNMAIV
HIEKANKDLRGAYTFVNKAFVENYFSDIPIINREQDLGIEGLRKAKLSYSPLDFEKKYMVDICYNCGCSDREERQRQII
>Mature_319_residues
MLNFKRLTINDKKLFESYIKPYNFLNCEYSFTTLYIWRKALDIKYAIYKGALIIKKKDFNDEYHFMQPLGYKKENLKDII
ETLMGYKKEKCIKYLFKDLRYDFVKELKNLYKDEEIYSNIMVEEDRDNFDYLYESKKLITLSGKKLHGKKNHYNYFIKNY
NYDIRDFTEEGVIEDSLRIAELWYEKNDTKDKHLLYELQSIRDMCYNMDVLGLEGMGLYIDGEIAGFSIGEKFSDNMAIV
HIEKANKDLRGAYTFVNKAFVENYFSDIPIINREQDLGIEGLRKAKLSYSPLDFEKKYMVDICYNCGCSDREERQRQII

Specific function: Unknown

COG id: COG4866

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38269; Mature: 38269

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNFKRLTINDKKLFESYIKPYNFLNCEYSFTTLYIWRKALDIKYAIYKGALIIKKKDFN
CCCEEEEEECHHHHHHHHCCCCCEEECEEEHHHEEEEHHHHHEEEEEECCEEEEEECCCC
DEYHFMQPLGYKKENLKDIIETLMGYKKEKCIKYLFKDLRYDFVKELKNLYKDEEIYSNI
CCHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MVEEDRDNFDYLYESKKLITLSGKKLHGKKNHYNYFIKNYNYDIRDFTEEGVIEDSLRIA
EEECCCCCCHHHCCCCEEEEEECCEECCCCCCCEEEEECCCCCHHHHCCCCCHHHHHHHH
ELWYEKNDTKDKHLLYELQSIRDMCYNMDVLGLEGMGLYIDGEIAGFSIGEKFSDNMAIV
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECEEECCCCCCCCCCCEEEE
HIEKANKDLRGAYTFVNKAFVENYFSDIPIINREQDLGIEGLRKAKLSYSPLDFEKKYMV
EEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHH
DICYNCGCSDREERQRQII
HHHHCCCCCCHHHHHHCCC
>Mature Secondary Structure
MLNFKRLTINDKKLFESYIKPYNFLNCEYSFTTLYIWRKALDIKYAIYKGALIIKKKDFN
CCCEEEEEECHHHHHHHHCCCCCEEECEEEHHHEEEEHHHHHEEEEEECCEEEEEECCCC
DEYHFMQPLGYKKENLKDIIETLMGYKKEKCIKYLFKDLRYDFVKELKNLYKDEEIYSNI
CCHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MVEEDRDNFDYLYESKKLITLSGKKLHGKKNHYNYFIKNYNYDIRDFTEEGVIEDSLRIA
EEECCCCCCHHHCCCCEEEEEECCEECCCCCCCEEEEECCCCCHHHHCCCCCHHHHHHHH
ELWYEKNDTKDKHLLYELQSIRDMCYNMDVLGLEGMGLYIDGEIAGFSIGEKFSDNMAIV
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECEEECCCCCCCCCCCEEEE
HIEKANKDLRGAYTFVNKAFVENYFSDIPIINREQDLGIEGLRKAKLSYSPLDFEKKYMV
EEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHH
DICYNCGCSDREERQRQII
HHHHCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12949158; 1386735 [H]