| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755118
Identifier: 170755118
GI number: 170755118
Start: 3077458
End: 3077772
Strand: Reverse
Name: 170755118
Synonym: CLD_1698
Alternate gene names: NA
Gene position: 3077772-3077458 (Counterclockwise)
Preceding gene: 170754331
Following gene: 170756421
Centisome position: 77.76
GC content: 33.65
Gene sequence:
>315_bases ATGGATTTAAAATATGTAATACCTAATGTGGAGAAGACATTTGGAAAATTAGAATATGCTGGTGAAGGGAATATTGAACA GAGAAGAGTAAATGGACGTAATGCAGTTTTGTCACGCAGCTACAATCTATATTCAGATATTCAGAGGGCAGACGATATTG CTGTTATTCTTCCAGTTGAAGCTGGTGAAAAACATTTTGATGTTGAAAAGAGAGTAAAGCTTATAAATCCACGTATTAAC GCAGAAGGTTATAAAATTGGGAATCGTGGATTTACAAATTATATTCTTCATGCAGATGAAATGGTAGAAGCATAA
Upstream 100 bases:
>100_bases CAGGAGCGTTCACCTCCGCAATTATAACTTAGAAGAATAGTAAGATAAAAACTAGCAAAAATTAATTATTCAATTATTAA AAAGAAAAGAGGTAAAAAAT
Downstream 100 bases:
>100_bases GGAGAGGAAGGTAAATTTATATGAGATTAGCAAATGGAATTGTTATTGATAAAGAAGCTACATTTGGAAATTTAAAATTT TCTGCATTAAGACGTGAGGT
Product: conjugative transposon protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MDLKYVIPNVEKTFGKLEYAGEGNIEQRRVNGRNAVLSRSYNLYSDIQRADDIAVILPVEAGEKHFDVEKRVKLINPRIN AEGYKIGNRGFTNYILHADEMVEA
Sequences:
>Translated_104_residues MDLKYVIPNVEKTFGKLEYAGEGNIEQRRVNGRNAVLSRSYNLYSDIQRADDIAVILPVEAGEKHFDVEKRVKLINPRIN AEGYKIGNRGFTNYILHADEMVEA >Mature_104_residues MDLKYVIPNVEKTFGKLEYAGEGNIEQRRVNGRNAVLSRSYNLYSDIQRADDIAVILPVEAGEKHFDVEKRVKLINPRIN AEGYKIGNRGFTNYILHADEMVEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11870; Mature: 11870
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLKYVIPNVEKTFGKLEYAGEGNIEQRRVNGRNAVLSRSYNLYSDIQRADDIAVILPVE CCCEEECCCCHHHHCCEEECCCCCCCEEECCCCCEEEECCCCHHHHHHCCCCEEEEEECC AGEKHFDVEKRVKLINPRINAEGYKIGNRGFTNYILHADEMVEA CCCCCCCHHHHHEECCCCCCCCCEEECCCCCCEEEEECHHHHCC >Mature Secondary Structure MDLKYVIPNVEKTFGKLEYAGEGNIEQRRVNGRNAVLSRSYNLYSDIQRADDIAVILPVE CCCEEECCCCHHHHCCEEECCCCCCCEEECCCCCEEEECCCCHHHHHHCCCCEEEEEECC AGEKHFDVEKRVKLINPRINAEGYKIGNRGFTNYILHADEMVEA CCCCCCCHHHHHEECCCCCCCCCEEECCCCCCEEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA