Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755112

Identifier: 170755112

GI number: 170755112

Start: 229089

End: 229964

Strand: Reverse

Name: 170755112

Synonym: CLD_0589

Alternate gene names: NA

Gene position: 229964-229089 (Counterclockwise)

Preceding gene: 170756944

Following gene: 170757516

Centisome position: 5.81

GC content: 23.29

Gene sequence:

>876_bases
ATGTTTGGATACGTTACTCCCTGCAAAATGGAACTCAAAATAAAAGAATATGAAAAATTTAGAGCTTATTATTGTGGACT
ATGTAAAACTATAAAAAAAGATTATGGTGAGTTACCCAGAATCACTATAAATTATGATATGACTTTTTTAGGCATATTAT
TAGATTCTCTAGAAGATAATAAAAATATCTTCATAAAAGAGCATTGCATTATTCATCCTATAAAGAAAAAAGTTATTATA
ACCGATAACGAAGCACTAAAATATGCAGCATTTTTTAATGTAGCTTTAAGTTATTATAAACTTTTAGATAATGTAGAAGA
TGATAACTCTATTAAAAGTAATATATCCTCTAAATTTTTAAAAAAATACATACACAAAAATAATGATTTATATGAAAAAC
ATATCCACACTGTGGATAATTCTTTGAAAAGCTTATATACTTGTGAAAAGAATTATGAAAATAAAAGCATTGATGAAATT
TCTCATCATTTTGCTCATTTAACAGGATATATATTATCTTCCTATAAAAATTTTTCTTTTAAAGATAATCTTTATTGGCT
AGGATATAATCTAGGGAAGTGGATTTACATAATTGATGCTTTCGATGATTTAGAAAAAGATATAAATGAAAACAAATTCA
ATGTTATAAATAATATTTATAATAAAAATAATTTAAATTATAAAGAGTTTAGAGATAGTATAAAAGATAAGATAGATTTT
CTACTGGTAAACTGCGCCAGTGCCTGTTTAAATAATTTTAATAATATGCCTATTGTAAAGAATAAAGGTTTATTATATAA
TATTTTACAATTTGGTTTAATGGAAAAAATGGAACGCGTATTAAAAGGAGTGAATATAAATAATGAATCCCTATGA

Upstream 100 bases:

>100_bases
AGAATTAGAAGAATTAGTGGAATTATTAGGTTATTCTATGAATGATACTACTTCAAAAACTATATATGAAATATTAAATG
AAGAAAAGGTAAAATAATCT

Downstream 100 bases:

>100_bases
AATTCTAGGAATAAATAAAAATGCTTCTAAAGAAGAAATACAACAAGCTTATAGAAAACTAGCTAAAAAATATCATCCTG
ATCAATATGGTAATAATCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MFGYVTPCKMELKIKEYEKFRAYYCGLCKTIKKDYGELPRITINYDMTFLGILLDSLEDNKNIFIKEHCIIHPIKKKVII
TDNEALKYAAFFNVALSYYKLLDNVEDDNSIKSNISSKFLKKYIHKNNDLYEKHIHTVDNSLKSLYTCEKNYENKSIDEI
SHHFAHLTGYILSSYKNFSFKDNLYWLGYNLGKWIYIIDAFDDLEKDINENKFNVINNIYNKNNLNYKEFRDSIKDKIDF
LLVNCASACLNNFNNMPIVKNKGLLYNILQFGLMEKMERVLKGVNINNESL

Sequences:

>Translated_291_residues
MFGYVTPCKMELKIKEYEKFRAYYCGLCKTIKKDYGELPRITINYDMTFLGILLDSLEDNKNIFIKEHCIIHPIKKKVII
TDNEALKYAAFFNVALSYYKLLDNVEDDNSIKSNISSKFLKKYIHKNNDLYEKHIHTVDNSLKSLYTCEKNYENKSIDEI
SHHFAHLTGYILSSYKNFSFKDNLYWLGYNLGKWIYIIDAFDDLEKDINENKFNVINNIYNKNNLNYKEFRDSIKDKIDF
LLVNCASACLNNFNNMPIVKNKGLLYNILQFGLMEKMERVLKGVNINNESL
>Mature_291_residues
MFGYVTPCKMELKIKEYEKFRAYYCGLCKTIKKDYGELPRITINYDMTFLGILLDSLEDNKNIFIKEHCIIHPIKKKVII
TDNEALKYAAFFNVALSYYKLLDNVEDDNSIKSNISSKFLKKYIHKNNDLYEKHIHTVDNSLKSLYTCEKNYENKSIDEI
SHHFAHLTGYILSSYKNFSFKDNLYWLGYNLGKWIYIIDAFDDLEKDINENKFNVINNIYNKNNLNYKEFRDSIKDKIDF
LLVNCASACLNNFNNMPIVKNKGLLYNILQFGLMEKMERVLKGVNINNESL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34345; Mature: 34345

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGYVTPCKMELKIKEYEKFRAYYCGLCKTIKKDYGELPRITINYDMTFLGILLDSLEDN
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCC
KNIFIKEHCIIHPIKKKVIITDNEALKYAAFFNVALSYYKLLDNVEDDNSIKSNISSKFL
CCEEEECCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KKYIHKNNDLYEKHIHTVDNSLKSLYTCEKNYENKSIDEISHHFAHLTGYILSSYKNFSF
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
KDNLYWLGYNLGKWIYIIDAFDDLEKDINENKFNVINNIYNKNNLNYKEFRDSIKDKIDF
CCCEEEEEECCCCEEEEEECHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LLVNCASACLNNFNNMPIVKNKGLLYNILQFGLMEKMERVLKGVNINNESL
HHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MFGYVTPCKMELKIKEYEKFRAYYCGLCKTIKKDYGELPRITINYDMTFLGILLDSLEDN
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCC
KNIFIKEHCIIHPIKKKVIITDNEALKYAAFFNVALSYYKLLDNVEDDNSIKSNISSKFL
CCEEEECCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KKYIHKNNDLYEKHIHTVDNSLKSLYTCEKNYENKSIDEISHHFAHLTGYILSSYKNFSF
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
KDNLYWLGYNLGKWIYIIDAFDDLEKDINENKFNVINNIYNKNNLNYKEFRDSIKDKIDF
CCCEEEEEECCCCEEEEEECHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LLVNCASACLNNFNNMPIVKNKGLLYNILQFGLMEKMERVLKGVNINNESL
HHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA