| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755108
Identifier: 170755108
GI number: 170755108
Start: 1093359
End: 1093973
Strand: Direct
Name: 170755108
Synonym: CLD_3579
Alternate gene names: NA
Gene position: 1093359-1093973 (Clockwise)
Preceding gene: 170754269
Following gene: 170755889
Centisome position: 27.62
GC content: 26.34
Gene sequence:
>615_bases ATGAGGAAATTTAGGCTTTTTACTGATTATAATAAAGAAGAAAAATGGTTAAATGAAATGTATAAAAAGGGCTATGAATT AGAAAATATATCTTTTGGATATAAATTTTATTCTATAGAACCGGAAAATGCTACAGTTAGAATTGATTATAGAATTTTTA AGAATAAAGAAGATTTTATTGACTATTGTACTTTATTTGAAGATAGTGGTTTGAAGCATCTAGCTGGCAATAAAAATTCA GGAGTTCAATATTTTAAAAAAATCAATAAAAATAGCGAAGAAGATATCTTTTCAGATGATATATCTAAAGCAGCAAGATA TAAAAGATTATCTGATCATTCCATGATGTTTGCATTATGTTTTTTTGTATTGTCCGTATCTCTCATATCTAATGGCAGTA TTAATGTTAATTTAATACTTAATCCTAAATTACTGTATTATACACCAGGATTATGGGAAAGAACTGGTGTACCATTTTGG GGAGGTTTGTTATTTGAAACACCCTTTGTACTTGGAAGAAGTGTTGTATTCTTAATTCCTCTAATAGTGGTTTTAAATTT CTATTTATCAATTAAAGCTAGAATCTCATACAATAAAGGGAAAAAATCTAATTAA
Upstream 100 bases:
>100_bases GAAAAGGGAAAAGAAGTCTTGCTTTTGGACATTGAAAGAATGCGTCATATGATTAACATAGCAAAAAGTAACTTTAAATT ATGATTTAGGGGGAATTAAT
Downstream 100 bases:
>100_bases AGATTAGAAATTTAATCATTTAGGAATACCCTTCATAACATTTTTATTAGTAAACATATAGATTACATTGAAATTAGAGG TAAAAATATATATAATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MRKFRLFTDYNKEEKWLNEMYKKGYELENISFGYKFYSIEPENATVRIDYRIFKNKEDFIDYCTLFEDSGLKHLAGNKNS GVQYFKKINKNSEEDIFSDDISKAARYKRLSDHSMMFALCFFVLSVSLISNGSINVNLILNPKLLYYTPGLWERTGVPFW GGLLFETPFVLGRSVVFLIPLIVVLNFYLSIKARISYNKGKKSN
Sequences:
>Translated_204_residues MRKFRLFTDYNKEEKWLNEMYKKGYELENISFGYKFYSIEPENATVRIDYRIFKNKEDFIDYCTLFEDSGLKHLAGNKNS GVQYFKKINKNSEEDIFSDDISKAARYKRLSDHSMMFALCFFVLSVSLISNGSINVNLILNPKLLYYTPGLWERTGVPFW GGLLFETPFVLGRSVVFLIPLIVVLNFYLSIKARISYNKGKKSN >Mature_204_residues MRKFRLFTDYNKEEKWLNEMYKKGYELENISFGYKFYSIEPENATVRIDYRIFKNKEDFIDYCTLFEDSGLKHLAGNKNS GVQYFKKINKNSEEDIFSDDISKAARYKRLSDHSMMFALCFFVLSVSLISNGSINVNLILNPKLLYYTPGLWERTGVPFW GGLLFETPFVLGRSVVFLIPLIVVLNFYLSIKARISYNKGKKSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23901; Mature: 23901
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFRLFTDYNKEEKWLNEMYKKGYELENISFGYKFYSIEPENATVRIDYRIFKNKEDFI CCCEEEECCCCHHHHHHHHHHHCCCCCCCEEECEEEEEECCCCCEEEEEEEEECCCHHHH DYCTLFEDSGLKHLAGNKNSGVQYFKKINKNSEEDIFSDDISKAARYKRLSDHSMMFALC HHHHHHCCCCCHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH FFVLSVSLISNGSINVNLILNPKLLYYTPGLWERTGVPFWGGLLFETPFVLGRSVVFLIP HHHHHHHHHCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHH LIVVLNFYLSIKARISYNKGKKSN HHHHHHHHHHEEEEEEECCCCCCC >Mature Secondary Structure MRKFRLFTDYNKEEKWLNEMYKKGYELENISFGYKFYSIEPENATVRIDYRIFKNKEDFI CCCEEEECCCCHHHHHHHHHHHCCCCCCCEEECEEEEEECCCCCEEEEEEEEECCCHHHH DYCTLFEDSGLKHLAGNKNSGVQYFKKINKNSEEDIFSDDISKAARYKRLSDHSMMFALC HHHHHHCCCCCHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH FFVLSVSLISNGSINVNLILNPKLLYYTPGLWERTGVPFWGGLLFETPFVLGRSVVFLIP HHHHHHHHHCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHH LIVVLNFYLSIKARISYNKGKKSN HHHHHHHHHHEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA