| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755067
Identifier: 170755067
GI number: 170755067
Start: 430991
End: 432001
Strand: Reverse
Name: 170755067
Synonym: CLD_0402
Alternate gene names: NA
Gene position: 432001-430991 (Counterclockwise)
Preceding gene: 170754902
Following gene: 170755074
Centisome position: 10.91
GC content: 37.98
Gene sequence:
>1011_bases ATGTATCCATTCTTTGATAATCCAAATTACACTAATACTTATGCTACAAATGAAGATTTTGTATGTCCATATTTTTTAGA TTATTATAACAACTCCCAGGATAACTATAAAAATTTTAGAGGAGAAAATTATGACTTTGAAGACACAGAAGAAAACATAG AAAATAGAAATATAGAAAAGACTGAGTATGAAGGTCTTTTTAGAGCCTGGAACCCTTGGACCAATCTGGGAGGTGATATC ACCTCTGGTTTAGGTGCCTCTTCTTGGGCTGCCAATAGAATAGACCTATTTGCCAGAGGAAGAGGCGGTGAATTAATTCA TAATTGGTTTGATAATGGTAAATGGAACTATTGGGAAAATCTTGGGGGTATTTTAACCTCTTCTCCTAAAGCTGTATCTT GGGGTTTTAACAGAATTGATGTGGTATGTCGTGGTACTGATAATGCTATGTACCATAAATGGTGGGATGGCTCTACTTGG AGTGGTTTTGAAAATCTCGGTGGACAACTTACATCAGCTCCTACTATTTGTTCTTGGGCTTCTAACAGATTAGATTGCTT TGCTAGAGGTACTGATAATCAACTACATCATAAATGGTGGGATGGTTCTAGTTGGAGTCAATGGGAGGCCCTAGGAGGAT CTCTAACTTCAGGTCCAGGTGCAGTTTCTTGGGGACCTAATAGAATTGACGTATTTGCCCGTGGTAGAAATAATACCCTA ATTCATAAATGGTGGAATGGAACTAGCTGGAGTCAATGGGAAGACTTAGGCGGCTTCTTAACTTCTGCTCCTTGTGCTTC CTCTAGGGGCCAAAATAGAATTGATGTTTTCGCTCGAGGTAGAAATAATAGACTTATGTATAAATACTGGGATGGTTCTA GATGGAGTGATTGGACTTTCTTACAGGGATACTTAACTTCTGAGCCAGTCTCTGTTTCTAGGAATTCTTCTAGCATAAAT GTGTTTGCAAAAGGCCCTAGAGAAAATGTTATAGAAAGAATTTATTCTTAA
Upstream 100 bases:
>100_bases TTATCCTCCGTTACTTTTTAATATATATTTTAAAGTACTATTGTAACATATTTTTTATTATAGAATATTATAAATTGAGT AATTTTAAAAGGAGTTCTTT
Downstream 100 bases:
>100_bases AATATACTTAGTTTAATTCCTACAATAAGAATGCATTTCAGAGACTAATTTATTTTGCTAAAAATTCTGGAAGTGATTGG ACTAAAAATATTCCGTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MYPFFDNPNYTNTYATNEDFVCPYFLDYYNNSQDNYKNFRGENYDFEDTEENIENRNIEKTEYEGLFRAWNPWTNLGGDI TSGLGASSWAANRIDLFARGRGGELIHNWFDNGKWNYWENLGGILTSSPKAVSWGFNRIDVVCRGTDNAMYHKWWDGSTW SGFENLGGQLTSAPTICSWASNRLDCFARGTDNQLHHKWWDGSSWSQWEALGGSLTSGPGAVSWGPNRIDVFARGRNNTL IHKWWNGTSWSQWEDLGGFLTSAPCASSRGQNRIDVFARGRNNRLMYKYWDGSRWSDWTFLQGYLTSEPVSVSRNSSSIN VFAKGPRENVIERIYS
Sequences:
>Translated_336_residues MYPFFDNPNYTNTYATNEDFVCPYFLDYYNNSQDNYKNFRGENYDFEDTEENIENRNIEKTEYEGLFRAWNPWTNLGGDI TSGLGASSWAANRIDLFARGRGGELIHNWFDNGKWNYWENLGGILTSSPKAVSWGFNRIDVVCRGTDNAMYHKWWDGSTW SGFENLGGQLTSAPTICSWASNRLDCFARGTDNQLHHKWWDGSSWSQWEALGGSLTSGPGAVSWGPNRIDVFARGRNNTL IHKWWNGTSWSQWEDLGGFLTSAPCASSRGQNRIDVFARGRNNRLMYKYWDGSRWSDWTFLQGYLTSEPVSVSRNSSSIN VFAKGPRENVIERIYS >Mature_336_residues MYPFFDNPNYTNTYATNEDFVCPYFLDYYNNSQDNYKNFRGENYDFEDTEENIENRNIEKTEYEGLFRAWNPWTNLGGDI TSGLGASSWAANRIDLFARGRGGELIHNWFDNGKWNYWENLGGILTSSPKAVSWGFNRIDVVCRGTDNAMYHKWWDGSTW SGFENLGGQLTSAPTICSWASNRLDCFARGTDNQLHHKWWDGSSWSQWEALGGSLTSGPGAVSWGPNRIDVFARGRNNTL IHKWWNGTSWSQWEDLGGFLTSAPCASSRGQNRIDVFARGRNNRLMYKYWDGSRWSDWTFLQGYLTSEPVSVSRNSSSIN VFAKGPRENVIERIYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.18
Molecular weight: Translated: 38641; Mature: 38641
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPFFDNPNYTNTYATNEDFVCPYFLDYYNNSQDNYKNFRGENYDFEDTEENIENRNIEK CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHCCCCH TEYEGLFRAWNPWTNLGGDITSGLGASSWAANRIDLFARGRGGELIHNWFDNGKWNYWEN HHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCEEHHHH LGGILTSSPKAVSWGFNRIDVVCRGTDNAMYHKWWDGSTWSGFENLGGQLTSAPTICSWA CCCCCCCCCCEEECCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHCCCCCCCCCHHHHC SNRLDCFARGTDNQLHHKWWDGSSWSQWEALGGSLTSGPGAVSWGPNRIDVFARGRNNTL CCCEEEEECCCCCCCCEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCE IHKWWNGTSWSQWEDLGGFLTSAPCASSRGQNRIDVFARGRNNRLMYKYWDGSRWSDWTF EEEECCCCCCHHHHHHCCHHHCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCEE LQGYLTSEPVSVSRNSSSINVFAKGPRENVIERIYS EEEEECCCCEEEECCCCEEEEEECCCHHHHHHHHCC >Mature Secondary Structure MYPFFDNPNYTNTYATNEDFVCPYFLDYYNNSQDNYKNFRGENYDFEDTEENIENRNIEK CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHCCCCH TEYEGLFRAWNPWTNLGGDITSGLGASSWAANRIDLFARGRGGELIHNWFDNGKWNYWEN HHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCEEHHHH LGGILTSSPKAVSWGFNRIDVVCRGTDNAMYHKWWDGSTWSGFENLGGQLTSAPTICSWA CCCCCCCCCCEEECCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHCCCCCCCCCHHHHC SNRLDCFARGTDNQLHHKWWDGSSWSQWEALGGSLTSGPGAVSWGPNRIDVFARGRNNTL CCCEEEEECCCCCCCCEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCE IHKWWNGTSWSQWEDLGGFLTSAPCASSRGQNRIDVFARGRNNRLMYKYWDGSRWSDWTF EEEECCCCCCHHHHHHCCHHHCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCEE LQGYLTSEPVSVSRNSSSINVFAKGPRENVIERIYS EEEEECCCCEEEECCCCEEEEEECCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA