| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755019
Identifier: 170755019
GI number: 170755019
Start: 1959941
End: 1960201
Strand: Reverse
Name: 170755019
Synonym: CLD_2803
Alternate gene names: NA
Gene position: 1960201-1959941 (Counterclockwise)
Preceding gene: 170757759
Following gene: 170754300
Centisome position: 49.52
GC content: 24.14
Gene sequence:
>261_bases ATGCATGATACTTATTTAATAGATAGAATATGGGCTAAAGTACAGGAAGTATGCATAGAAAATAAATTTGAAAAACTTAC TAAATTAGTAGTGACAGTAGATAATAACAGTCATGTTAATAAAGAAAATCTATATGATTATATAACAAAATACAATAATA ATTTAGTAGATGAAAATATAGAAATTGTTGTAGAAAGACAACCTATAGATGAGCAAACAGCTATTATTAAATTATTAGAA GGTGATGTATCTGATTGCTAA
Upstream 100 bases:
>100_bases AGTTTGATGTTATAAAAAATGACTATATATTTTTAATATTTAATTTATGTAAAGGCGTGTATGATATATACACTAGGTAT TGATGAAAGGAAGTTTAAAA
Downstream 100 bases:
>100_bases AGACAAATTCAATAATAAAAAGCGATATTTAATAAAAATAGAAGGTATAGTACAAGGGGTAGGATTTAGACCTTTTGTAT ATAATAGAGCAACAGAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MHDTYLIDRIWAKVQEVCIENKFEKLTKLVVTVDNNSHVNKENLYDYITKYNNNLVDENIEIVVERQPIDEQTAIIKLLE GDVSDC
Sequences:
>Translated_86_residues MHDTYLIDRIWAKVQEVCIENKFEKLTKLVVTVDNNSHVNKENLYDYITKYNNNLVDENIEIVVERQPIDEQTAIIKLLE GDVSDC >Mature_86_residues MHDTYLIDRIWAKVQEVCIENKFEKLTKLVVTVDNNSHVNKENLYDYITKYNNNLVDENIEIVVERQPIDEQTAIIKLLE GDVSDC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10098; Mature: 10098
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDTYLIDRIWAKVQEVCIENKFEKLTKLVVTVDNNSHVNKENLYDYITKYNNNLVDENI CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCE EIVVERQPIDEQTAIIKLLEGDVSDC EEEEECCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MHDTYLIDRIWAKVQEVCIENKFEKLTKLVVTVDNNSHVNKENLYDYITKYNNNLVDENI CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCE EIVVERQPIDEQTAIIKLLEGDVSDC EEEEECCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA