Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755001

Identifier: 170755001

GI number: 170755001

Start: 2378872

End: 2380386

Strand: Reverse

Name: 170755001

Synonym: CLD_2387

Alternate gene names: NA

Gene position: 2380386-2378872 (Counterclockwise)

Preceding gene: 170756181

Following gene: 170754482

Centisome position: 60.14

GC content: 31.95

Gene sequence:

>1515_bases
GTGAGTGAAAATTCAAAATCTAAGGTAGGATTCTTAACTGCTTTTCAGGTAGCAGCAGTGTGGTTTGGAGCTCATGTAGG
AGGGGGATTTGCAACAGGTAATCAAACAATGAATTTTTTTGTTAAACATGGTTGGCATTCTATATGGTTACCTGCAGTTA
TAATTATAATTATAGGATTAACCTATAGAGAGTCATTAGTATTAGCAAAAAATTATGGGACTTATGATTATAAAAGTTGG
TCAAAAAAAATGTATGAACCCTATGATAAATCCTTTTCTGTTATTTTTGAAATAGGATATTTAATGATAGTATTATTAGG
TACAGGAGGATCTATAGCAGGTTCCGCTTCTCTAATGGAGACTTATGGAGTTAATTATTTAGTAGGAGTATTAATTACAG
GTGGCATTTTTTATATATTAACTATATATGGATCAGAATTAATAAGAAAGGCTTCAACTATTATAACCGTACTAATATTA
ATATTTTTAACAATCATAGTAATCGTAGGCATAGTTAATAATTCAGGGAATCTATCACATCTTGTTTCTACAAAATATTC
TCCTTCATCCTTTGGTACAGTTTTGTATAGTGGACTTCGATATGCTGGTTATCAGGCCTTTGTTGTTGCTATTGTACTAA
GTGCCAGTGACACTTTAAAATCTGATAAAGCTATTAATAAGTCAATTCTTTTAGGTATTATTTTAAACGGTGTAATGATA
ACACTATCCTGTATAATGCTATTGGCATGGATGCCAGGAGCCCAAAAGGAAACTATACCGATTTTATATATATGTAAACG
TTTAAATAGTGGATTTTTATTATTTTCTTACTCAGTAGTACTATTTTTGGCCTTTGTATCCACAGGTATAGGATGTGTTT
TTGGGGCAGTGGCTAGGTTTGAACATGTTTTTAAGAAACCGGAGAATATTAAAAAAAGAAGAGGTTTGATTTCTCTTGTT
TGTATGATATTATCCATGGCAATTTCCCTATTTGGATTAACTAAAATTGTTGTTATAGGCTATGGATATGTAGGGATAAT
CGGCATATTTGCTGTAGTTATTCCTTGTATAGTTGTAGGAAGAATAAAAAATAATAAATTTAAAAAAGAGAAGGAAAGTA
TATTATTAGAAGAGCAAAATGATATATCCAATGGAGATAAGAATAGTGCATCAGTAGAAGGGAAAGGTGACATGTTAAAA
GAAAAAGATAGTATGCTAAAAGGAGAGCAAGATAATATATCCCAAAAAGATAAAGACATTACATCAGAGGAAGACAAGGA
TGATGTGTTAAAAGAAAAAGACAGTGGGTCAATAGAAGACCAAGATGATATATCAAAGAAAGATGAGGAAAATGCGCCAG
TAGAAGGTCAAGATGATGCATCAAAGGGAAATAAGAAAAGTGTGCTAGTAGAAGGTCAGGATGATATGCCAAAGGAAGAT
AAAGAAAGTGCATCAATAGAAGAGCAAAAAAGTACATCAACACAGGAAGATGGCAACGCATCAAAGGAAGAATAA

Upstream 100 bases:

>100_bases
TTATGTTGGTTATAAAAAATTTAATATTTAATAGGATTGTCTTAATAGGGGGACATAATATAAAAATTATACCCAATTAA
TATATATAGGGGAGGATAAT

Downstream 100 bases:

>100_bases
GATAATATAAAAAATAAAAAGATGTATATCAATTGTAGAGTCTGAATAACAATTACTAACTAAAATATTTTAAAAAGGGG
GATACACATATGTATACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MSENSKSKVGFLTAFQVAAVWFGAHVGGGFATGNQTMNFFVKHGWHSIWLPAVIIIIIGLTYRESLVLAKNYGTYDYKSW
SKKMYEPYDKSFSVIFEIGYLMIVLLGTGGSIAGSASLMETYGVNYLVGVLITGGIFYILTIYGSELIRKASTIITVLIL
IFLTIIVIVGIVNNSGNLSHLVSTKYSPSSFGTVLYSGLRYAGYQAFVVAIVLSASDTLKSDKAINKSILLGIILNGVMI
TLSCIMLLAWMPGAQKETIPILYICKRLNSGFLLFSYSVVLFLAFVSTGIGCVFGAVARFEHVFKKPENIKKRRGLISLV
CMILSMAISLFGLTKIVVIGYGYVGIIGIFAVVIPCIVVGRIKNNKFKKEKESILLEEQNDISNGDKNSASVEGKGDMLK
EKDSMLKGEQDNISQKDKDITSEEDKDDVLKEKDSGSIEDQDDISKKDEENAPVEGQDDASKGNKKSVLVEGQDDMPKED
KESASIEEQKSTSTQEDGNASKEE

Sequences:

>Translated_504_residues
MSENSKSKVGFLTAFQVAAVWFGAHVGGGFATGNQTMNFFVKHGWHSIWLPAVIIIIIGLTYRESLVLAKNYGTYDYKSW
SKKMYEPYDKSFSVIFEIGYLMIVLLGTGGSIAGSASLMETYGVNYLVGVLITGGIFYILTIYGSELIRKASTIITVLIL
IFLTIIVIVGIVNNSGNLSHLVSTKYSPSSFGTVLYSGLRYAGYQAFVVAIVLSASDTLKSDKAINKSILLGIILNGVMI
TLSCIMLLAWMPGAQKETIPILYICKRLNSGFLLFSYSVVLFLAFVSTGIGCVFGAVARFEHVFKKPENIKKRRGLISLV
CMILSMAISLFGLTKIVVIGYGYVGIIGIFAVVIPCIVVGRIKNNKFKKEKESILLEEQNDISNGDKNSASVEGKGDMLK
EKDSMLKGEQDNISQKDKDITSEEDKDDVLKEKDSGSIEDQDDISKKDEENAPVEGQDDASKGNKKSVLVEGQDDMPKED
KESASIEEQKSTSTQEDGNASKEE
>Mature_503_residues
SENSKSKVGFLTAFQVAAVWFGAHVGGGFATGNQTMNFFVKHGWHSIWLPAVIIIIIGLTYRESLVLAKNYGTYDYKSWS
KKMYEPYDKSFSVIFEIGYLMIVLLGTGGSIAGSASLMETYGVNYLVGVLITGGIFYILTIYGSELIRKASTIITVLILI
FLTIIVIVGIVNNSGNLSHLVSTKYSPSSFGTVLYSGLRYAGYQAFVVAIVLSASDTLKSDKAINKSILLGIILNGVMIT
LSCIMLLAWMPGAQKETIPILYICKRLNSGFLLFSYSVVLFLAFVSTGIGCVFGAVARFEHVFKKPENIKKRRGLISLVC
MILSMAISLFGLTKIVVIGYGYVGIIGIFAVVIPCIVVGRIKNNKFKKEKESILLEEQNDISNGDKNSASVEGKGDMLKE
KDSMLKGEQDNISQKDKDITSEEDKDDVLKEKDSGSIEDQDDISKKDEENAPVEGQDDASKGNKKSVLVEGQDDMPKEDK
ESASIEEQKSTSTQEDGNASKEE

Specific function: Unknown

COG id: COG3949

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55104; Mature: 54973

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SENSKSKVGFLTAFQVAAVWFGAHVGGGFATGNQTMNFFVKHGWHSIWLPAVIIIIIGL
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH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HHHCCHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA