| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755001
Identifier: 170755001
GI number: 170755001
Start: 2378872
End: 2380386
Strand: Reverse
Name: 170755001
Synonym: CLD_2387
Alternate gene names: NA
Gene position: 2380386-2378872 (Counterclockwise)
Preceding gene: 170756181
Following gene: 170754482
Centisome position: 60.14
GC content: 31.95
Gene sequence:
>1515_bases GTGAGTGAAAATTCAAAATCTAAGGTAGGATTCTTAACTGCTTTTCAGGTAGCAGCAGTGTGGTTTGGAGCTCATGTAGG AGGGGGATTTGCAACAGGTAATCAAACAATGAATTTTTTTGTTAAACATGGTTGGCATTCTATATGGTTACCTGCAGTTA TAATTATAATTATAGGATTAACCTATAGAGAGTCATTAGTATTAGCAAAAAATTATGGGACTTATGATTATAAAAGTTGG TCAAAAAAAATGTATGAACCCTATGATAAATCCTTTTCTGTTATTTTTGAAATAGGATATTTAATGATAGTATTATTAGG TACAGGAGGATCTATAGCAGGTTCCGCTTCTCTAATGGAGACTTATGGAGTTAATTATTTAGTAGGAGTATTAATTACAG GTGGCATTTTTTATATATTAACTATATATGGATCAGAATTAATAAGAAAGGCTTCAACTATTATAACCGTACTAATATTA ATATTTTTAACAATCATAGTAATCGTAGGCATAGTTAATAATTCAGGGAATCTATCACATCTTGTTTCTACAAAATATTC TCCTTCATCCTTTGGTACAGTTTTGTATAGTGGACTTCGATATGCTGGTTATCAGGCCTTTGTTGTTGCTATTGTACTAA GTGCCAGTGACACTTTAAAATCTGATAAAGCTATTAATAAGTCAATTCTTTTAGGTATTATTTTAAACGGTGTAATGATA ACACTATCCTGTATAATGCTATTGGCATGGATGCCAGGAGCCCAAAAGGAAACTATACCGATTTTATATATATGTAAACG TTTAAATAGTGGATTTTTATTATTTTCTTACTCAGTAGTACTATTTTTGGCCTTTGTATCCACAGGTATAGGATGTGTTT TTGGGGCAGTGGCTAGGTTTGAACATGTTTTTAAGAAACCGGAGAATATTAAAAAAAGAAGAGGTTTGATTTCTCTTGTT TGTATGATATTATCCATGGCAATTTCCCTATTTGGATTAACTAAAATTGTTGTTATAGGCTATGGATATGTAGGGATAAT CGGCATATTTGCTGTAGTTATTCCTTGTATAGTTGTAGGAAGAATAAAAAATAATAAATTTAAAAAAGAGAAGGAAAGTA TATTATTAGAAGAGCAAAATGATATATCCAATGGAGATAAGAATAGTGCATCAGTAGAAGGGAAAGGTGACATGTTAAAA GAAAAAGATAGTATGCTAAAAGGAGAGCAAGATAATATATCCCAAAAAGATAAAGACATTACATCAGAGGAAGACAAGGA TGATGTGTTAAAAGAAAAAGACAGTGGGTCAATAGAAGACCAAGATGATATATCAAAGAAAGATGAGGAAAATGCGCCAG TAGAAGGTCAAGATGATGCATCAAAGGGAAATAAGAAAAGTGTGCTAGTAGAAGGTCAGGATGATATGCCAAAGGAAGAT AAAGAAAGTGCATCAATAGAAGAGCAAAAAAGTACATCAACACAGGAAGATGGCAACGCATCAAAGGAAGAATAA
Upstream 100 bases:
>100_bases TTATGTTGGTTATAAAAAATTTAATATTTAATAGGATTGTCTTAATAGGGGGACATAATATAAAAATTATACCCAATTAA TATATATAGGGGAGGATAAT
Downstream 100 bases:
>100_bases GATAATATAAAAAATAAAAAGATGTATATCAATTGTAGAGTCTGAATAACAATTACTAACTAAAATATTTTAAAAAGGGG GATACACATATGTATACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MSENSKSKVGFLTAFQVAAVWFGAHVGGGFATGNQTMNFFVKHGWHSIWLPAVIIIIIGLTYRESLVLAKNYGTYDYKSW SKKMYEPYDKSFSVIFEIGYLMIVLLGTGGSIAGSASLMETYGVNYLVGVLITGGIFYILTIYGSELIRKASTIITVLIL IFLTIIVIVGIVNNSGNLSHLVSTKYSPSSFGTVLYSGLRYAGYQAFVVAIVLSASDTLKSDKAINKSILLGIILNGVMI TLSCIMLLAWMPGAQKETIPILYICKRLNSGFLLFSYSVVLFLAFVSTGIGCVFGAVARFEHVFKKPENIKKRRGLISLV CMILSMAISLFGLTKIVVIGYGYVGIIGIFAVVIPCIVVGRIKNNKFKKEKESILLEEQNDISNGDKNSASVEGKGDMLK EKDSMLKGEQDNISQKDKDITSEEDKDDVLKEKDSGSIEDQDDISKKDEENAPVEGQDDASKGNKKSVLVEGQDDMPKED KESASIEEQKSTSTQEDGNASKEE
Sequences:
>Translated_504_residues MSENSKSKVGFLTAFQVAAVWFGAHVGGGFATGNQTMNFFVKHGWHSIWLPAVIIIIIGLTYRESLVLAKNYGTYDYKSW SKKMYEPYDKSFSVIFEIGYLMIVLLGTGGSIAGSASLMETYGVNYLVGVLITGGIFYILTIYGSELIRKASTIITVLIL IFLTIIVIVGIVNNSGNLSHLVSTKYSPSSFGTVLYSGLRYAGYQAFVVAIVLSASDTLKSDKAINKSILLGIILNGVMI TLSCIMLLAWMPGAQKETIPILYICKRLNSGFLLFSYSVVLFLAFVSTGIGCVFGAVARFEHVFKKPENIKKRRGLISLV CMILSMAISLFGLTKIVVIGYGYVGIIGIFAVVIPCIVVGRIKNNKFKKEKESILLEEQNDISNGDKNSASVEGKGDMLK EKDSMLKGEQDNISQKDKDITSEEDKDDVLKEKDSGSIEDQDDISKKDEENAPVEGQDDASKGNKKSVLVEGQDDMPKED KESASIEEQKSTSTQEDGNASKEE >Mature_503_residues SENSKSKVGFLTAFQVAAVWFGAHVGGGFATGNQTMNFFVKHGWHSIWLPAVIIIIIGLTYRESLVLAKNYGTYDYKSWS KKMYEPYDKSFSVIFEIGYLMIVLLGTGGSIAGSASLMETYGVNYLVGVLITGGIFYILTIYGSELIRKASTIITVLILI FLTIIVIVGIVNNSGNLSHLVSTKYSPSSFGTVLYSGLRYAGYQAFVVAIVLSASDTLKSDKAINKSILLGIILNGVMIT LSCIMLLAWMPGAQKETIPILYICKRLNSGFLLFSYSVVLFLAFVSTGIGCVFGAVARFEHVFKKPENIKKRRGLISLVC MILSMAISLFGLTKIVVIGYGYVGIIGIFAVVIPCIVVGRIKNNKFKKEKESILLEEQNDISNGDKNSASVEGKGDMLKE KDSMLKGEQDNISQKDKDITSEEDKDDVLKEKDSGSIEDQDDISKKDEENAPVEGQDDASKGNKKSVLVEGQDDMPKEDK ESASIEEQKSTSTQEDGNASKEE
Specific function: Unknown
COG id: COG3949
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55104; Mature: 54973
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENSKSKVGFLTAFQVAAVWFGAHVGGGFATGNQTMNFFVKHGWHSIWLPAVIIIIIGL CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH TYRESLVLAKNYGTYDYKSWSKKMYEPYDKSFSVIFEIGYLMIVLLGTGGSIAGSASLME HHHCCEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH TYGVNYLVGVLITGGIFYILTIYGSELIRKASTIITVLILIFLTIIVIVGIVNNSGNLSH HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LVSTKYSPSSFGTVLYSGLRYAGYQAFVVAIVLSASDTLKSDKAINKSILLGIILNGVMI HHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH TLSCIMLLAWMPGAQKETIPILYICKRLNSGFLLFSYSVVLFLAFVSTGIGCVFGAVARF HHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH EHVFKKPENIKKRRGLISLVCMILSMAISLFGLTKIVVIGYGYVGIIGIFAVVIPCIVVG HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH RIKNNKFKKEKESILLEEQNDISNGDKNSASVEGKGDMLKEKDSMLKGEQDNISQKDKDI HHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHCCCC TSEEDKDDVLKEKDSGSIEDQDDISKKDEENAPVEGQDDASKGNKKSVLVEGQDDMPKED CCCCCHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC KESASIEEQKSTSTQEDGNASKEE HHHCCHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SENSKSKVGFLTAFQVAAVWFGAHVGGGFATGNQTMNFFVKHGWHSIWLPAVIIIIIGL CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH TYRESLVLAKNYGTYDYKSWSKKMYEPYDKSFSVIFEIGYLMIVLLGTGGSIAGSASLME HHHCCEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH TYGVNYLVGVLITGGIFYILTIYGSELIRKASTIITVLILIFLTIIVIVGIVNNSGNLSH HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LVSTKYSPSSFGTVLYSGLRYAGYQAFVVAIVLSASDTLKSDKAINKSILLGIILNGVMI HHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH TLSCIMLLAWMPGAQKETIPILYICKRLNSGFLLFSYSVVLFLAFVSTGIGCVFGAVARF HHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH EHVFKKPENIKKRRGLISLVCMILSMAISLFGLTKIVVIGYGYVGIIGIFAVVIPCIVVG HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH RIKNNKFKKEKESILLEEQNDISNGDKNSASVEGKGDMLKEKDSMLKGEQDNISQKDKDI HHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHCCCC TSEEDKDDVLKEKDSGSIEDQDDISKKDEENAPVEGQDDASKGNKKSVLVEGQDDMPKED CCCCCHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC KESASIEEQKSTSTQEDGNASKEE HHHCCHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA