Click here to switch to the map view.

The map label for this gene is yvjA [H]

Identifier: 170754884

GI number: 170754884

Start: 1216782

End: 1217645

Strand: Direct

Name: yvjA [H]

Synonym: CLD_3468

Alternate gene names: 170754884

Gene position: 1216782-1217645 (Clockwise)

Preceding gene: 170756202

Following gene: 170757854

Centisome position: 30.74

GC content: 25.93

Gene sequence:

>864_bases
ATGGGTTTTAAAGCATTAGATAAGTATATTATTAAAGATATAGTAATGGTTATTATAGGATCACTCATAACAGCTTTAGG
TATTAATATGTTTCTAATTCATGCTAATTTATTAAGTGGTGGACTTTCAGGTATAACTTTAATTATTCAATATGTTACAG
GTTTTCCTGCTGCTTACTCACTTTTAATTTTAAATATACCTTTATTCTTTTTAAGTTATAAGAAAGTAAATAAAAAATTC
ACATTTTTATCCTTAATTGGAACTATAGCTCTTTCAGTAGGACTTATACTAACGGAACCTTTGAAGAATACAATACAAGT
AAATGATATACTTTTATTGGGATTATATGGAGGTGTTTTAAATGGTATAGGTGTTGGAATTGTATTTAGCAATCATGGTT
CTACTGGTGGTTTAGATATAGTATCTGCACTTATAAAAAAGAAATATGGAAATTTCGATATAGGAACTATAACATTTATA
GTTAACTTTATAATAGTTTCTATATCTGCATGTATATTTGGATTAACTAGCGCGTTGTATACTTTGGTATCTATGTATAT
AGCTTCTTATTTAGTAGATAAAGTTATAAAAGGATTTAATAGACAAAAGCTTATACTTATAATAACTGAAAAAGAAGAGG
ATGTAAGTAAAGTTTTAATGAATGAATTAAATAGAGGAGTAACTTTTTTATATGCTAAGGGAGCTTACACAAAAAAGGAT
AAAAAGGTTTTATATTGTGTAGTATCTTTATCTCAATTACCAAAATTAAAATTAATAGTTAAAGATATAGATGAAGGTGC
CTTTATATCTATATTGGATGCTTCAGAAGTAGAGGGTAGAGGATTTAAAAAAACTTCTTTATAA

Upstream 100 bases:

>100_bases
GGTATGGTTCATAGTATTTATATTAAAAAACGTAGTTACATTTATATAGCATATACAATAAAATAAATCTTTAATATATG
AAAGCAGGAGGAGTAAAATT

Downstream 100 bases:

>100_bases
TATTTTCAAATATTTGTTTAAAACTCCATTGTTTTCTTATTATAATAAATTAATATTACAAATGATTAAAGAAAACCTTA
ACTATTAATACACATATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MGFKALDKYIIKDIVMVIIGSLITALGINMFLIHANLLSGGLSGITLIIQYVTGFPAAYSLLILNIPLFFLSYKKVNKKF
TFLSLIGTIALSVGLILTEPLKNTIQVNDILLLGLYGGVLNGIGVGIVFSNHGSTGGLDIVSALIKKKYGNFDIGTITFI
VNFIIVSISACIFGLTSALYTLVSMYIASYLVDKVIKGFNRQKLILIITEKEEDVSKVLMNELNRGVTFLYAKGAYTKKD
KKVLYCVVSLSQLPKLKLIVKDIDEGAFISILDASEVEGRGFKKTSL

Sequences:

>Translated_287_residues
MGFKALDKYIIKDIVMVIIGSLITALGINMFLIHANLLSGGLSGITLIIQYVTGFPAAYSLLILNIPLFFLSYKKVNKKF
TFLSLIGTIALSVGLILTEPLKNTIQVNDILLLGLYGGVLNGIGVGIVFSNHGSTGGLDIVSALIKKKYGNFDIGTITFI
VNFIIVSISACIFGLTSALYTLVSMYIASYLVDKVIKGFNRQKLILIITEKEEDVSKVLMNELNRGVTFLYAKGAYTKKD
KKVLYCVVSLSQLPKLKLIVKDIDEGAFISILDASEVEGRGFKKTSL
>Mature_286_residues
GFKALDKYIIKDIVMVIIGSLITALGINMFLIHANLLSGGLSGITLIIQYVTGFPAAYSLLILNIPLFFLSYKKVNKKFT
FLSLIGTIALSVGLILTEPLKNTIQVNDILLLGLYGGVLNGIGVGIVFSNHGSTGGLDIVSALIKKKYGNFDIGTITFIV
NFIIVSISACIFGLTSALYTLVSMYIASYLVDKVIKGFNRQKLILIITEKEEDVSKVLMNELNRGVTFLYAKGAYTKKDK
KVLYCVVSLSQLPKLKLIVKDIDEGAFISILDASEVEGRGFKKTSL

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740
- InterPro:   IPR019264 [H]

Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]

EC number: NA

Molecular weight: Translated: 31267; Mature: 31136

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFKALDKYIIKDIVMVIIGSLITALGINMFLIHANLLSGGLSGITLIIQYVTGFPAAYS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHH
LLILNIPLFFLSYKKVNKKFTFLSLIGTIALSVGLILTEPLKNTIQVNDILLLGLYGGVL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHH
NGIGVGIVFSNHGSTGGLDIVSALIKKKYGNFDIGTITFIVNFIIVSISACIFGLTSALY
HCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLVSMYIASYLVDKVIKGFNRQKLILIITEKEEDVSKVLMNELNRGVTFLYAKGAYTKKD
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCC
KKVLYCVVSLSQLPKLKLIVKDIDEGAFISILDASEVEGRGFKKTSL
CCHHHEEEEHHHCCHHHHHEEECCCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
GFKALDKYIIKDIVMVIIGSLITALGINMFLIHANLLSGGLSGITLIIQYVTGFPAAYS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHH
LLILNIPLFFLSYKKVNKKFTFLSLIGTIALSVGLILTEPLKNTIQVNDILLLGLYGGVL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHH
NGIGVGIVFSNHGSTGGLDIVSALIKKKYGNFDIGTITFIVNFIIVSISACIFGLTSALY
HCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLVSMYIASYLVDKVIKGFNRQKLILIITEKEEDVSKVLMNELNRGVTFLYAKGAYTKKD
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCC
KKVLYCVVSLSQLPKLKLIVKDIDEGAFISILDASEVEGRGFKKTSL
CCHHHEEEEHHHCCHHHHHEEECCCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]