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The map label for this gene is gerAA

Identifier: 170754851

GI number: 170754851

Start: 2980913

End: 2982400

Strand: Reverse

Name: gerAA

Synonym: CLD_1776

Alternate gene names: 170754851

Gene position: 2982400-2980913 (Counterclockwise)

Preceding gene: 170757322

Following gene: 170755854

Centisome position: 75.35

GC content: 28.63

Gene sequence:

>1488_bases
ATGAGAGATAAATTAGATGATAAAATAAAACCTATTTTAGATAAACTTAATTCTCCAGATAAATTTAATGTAAAAAAAAT
AAATTTAGGTAAAGGAAATAGTATAAAAGTAGCGCTAGTTTATGATAAAGATTTAATAGATAGAAATATAATAAGTGACT
ACATATTAAAACCATTAATGCTTCATGTGGAGGAAAGCTTTACAGGTAAGGAAAATATTACAGAAATTTTAATGGAAAAA
TATATATGTGTAGATGACACTATTATAAAAACAGATAATGAAGAAATAACAGATTTCATAAAAAAAGGATCTACAGCAAT
TTTTGTTCCAAATAGTGAAAATACTATAATTATTAATACTGTTAGTAAAAGATATAAAACTATATTTCCCCCAGAAATAG
AAACTTCCATAAGAGGTCCTAAGGAGGCCTTTACAGAAAGTATAGAGGATAATTTATCCATAATTAATAGAAGAATAAAA
GATAAAAATTTAAGAGCTGAAAGGCTTATAGTTGGAGAAAGATCACAAACAGAAGTAGCAATTATATATATAGAGGATAT
AGCAGATGAGAAATTAGTAAATAAGATAAGGGAAAGAGTAAATTTAATAAAAGTAGATCATATAAAAAACGCAGGATATA
TAGAAGAATATATAGAGAATAATTCTTATACTGTATTTCCACAGTCTTTTACTACAGAAAGACCAGATGTAATGGCAGTT
AATATCATGGAGGGGAAAATAGGTATATTAATGGAAGGATCTCAGCAAGGTATAACTTTACCAGCTATTTTTATAGAATT
TTTTCAAACCGTAGAGGATTACAATCAAAAGTTTATGTTATCAACAGTTATAAGATTTTTTAGAGTAATAGCTGTAATTT
TAGTGTTAAGTCTAACCCCTATATACTTAACACTTATAAAATTTAATGTGGAATTATTGCCAGACAAATTATTACAACCT
ATTATACAATCTAGAGTTGGTATTGCTTTGAATCCAATTATGGAAATAATTTCAATGGAGCTTATAGTAGAATTTTTAAG
AGAAGGAGGACTAAGATTGCCCTCAAAAATAGGGCAAACTCTAAGTGTGGTTGGTGGTATTATAATTGGAGATGCGGCTA
TAAAATCTCACCTTGTAAGTTCTACCACCCTTTTAGTAGTAGGTGTCTCTACAGTGGCTACCTTTCTTATTCCTAATTAT
GAAATGTCCTTAACTATTAGGATATTAAAATTTCCTATATTGTTTCTAACCAATGCTTTGGGCATAATAGGAGTTTCTAT
AGGATGGTTTTTTATATTGGTTGAATTATGTTCTTTGGACAGTATGGGAGTTCCTTATCTTCAGTTTAAAAAATCTGATA
TGAAGGATATATTCATTAGGGCCCCTTTGTGGAAAATGAAAAAAAGACCAGAGGCAATACCAAACAAAAATCCTGTGCGT
CAAGAGGATTTTAGAAAAAAATTTAGGGGGAACAACAATGGAAAATAG

Upstream 100 bases:

>100_bases
TCTAAATAAATAGATATCCTATGAATAATATAATTAAATTTGGTGATTTAGCACATAATATATGATAAGTATATATAGAT
CATATAAGAAAGGGTAAAAT

Downstream 100 bases:

>100_bases
CAGAAATAATGCTCTAAGTACAAGTCAAACTATAGTTATGATAGCAGGATCAATGATAGGGATAGGGATATTATCTCTTC
CAGCTAATTTAAGTAAGATA

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MRDKLDDKIKPILDKLNSPDKFNVKKINLGKGNSIKVALVYDKDLIDRNIISDYILKPLMLHVEESFTGKENITEILMEK
YICVDDTIIKTDNEEITDFIKKGSTAIFVPNSENTIIINTVSKRYKTIFPPEIETSIRGPKEAFTESIEDNLSIINRRIK
DKNLRAERLIVGERSQTEVAIIYIEDIADEKLVNKIRERVNLIKVDHIKNAGYIEEYIENNSYTVFPQSFTTERPDVMAV
NIMEGKIGILMEGSQQGITLPAIFIEFFQTVEDYNQKFMLSTVIRFFRVIAVILVLSLTPIYLTLIKFNVELLPDKLLQP
IIQSRVGIALNPIMEIISMELIVEFLREGGLRLPSKIGQTLSVVGGIIIGDAAIKSHLVSSTTLLVVGVSTVATFLIPNY
EMSLTIRILKFPILFLTNALGIIGVSIGWFFILVELCSLDSMGVPYLQFKKSDMKDIFIRAPLWKMKKRPEAIPNKNPVR
QEDFRKKFRGNNNGK

Sequences:

>Translated_495_residues
MRDKLDDKIKPILDKLNSPDKFNVKKINLGKGNSIKVALVYDKDLIDRNIISDYILKPLMLHVEESFTGKENITEILMEK
YICVDDTIIKTDNEEITDFIKKGSTAIFVPNSENTIIINTVSKRYKTIFPPEIETSIRGPKEAFTESIEDNLSIINRRIK
DKNLRAERLIVGERSQTEVAIIYIEDIADEKLVNKIRERVNLIKVDHIKNAGYIEEYIENNSYTVFPQSFTTERPDVMAV
NIMEGKIGILMEGSQQGITLPAIFIEFFQTVEDYNQKFMLSTVIRFFRVIAVILVLSLTPIYLTLIKFNVELLPDKLLQP
IIQSRVGIALNPIMEIISMELIVEFLREGGLRLPSKIGQTLSVVGGIIIGDAAIKSHLVSSTTLLVVGVSTVATFLIPNY
EMSLTIRILKFPILFLTNALGIIGVSIGWFFILVELCSLDSMGVPYLQFKKSDMKDIFIRAPLWKMKKRPEAIPNKNPVR
QEDFRKKFRGNNNGK
>Mature_495_residues
MRDKLDDKIKPILDKLNSPDKFNVKKINLGKGNSIKVALVYDKDLIDRNIISDYILKPLMLHVEESFTGKENITEILMEK
YICVDDTIIKTDNEEITDFIKKGSTAIFVPNSENTIIINTVSKRYKTIFPPEIETSIRGPKEAFTESIEDNLSIINRRIK
DKNLRAERLIVGERSQTEVAIIYIEDIADEKLVNKIRERVNLIKVDHIKNAGYIEEYIENNSYTVFPQSFTTERPDVMAV
NIMEGKIGILMEGSQQGITLPAIFIEFFQTVEDYNQKFMLSTVIRFFRVIAVILVLSLTPIYLTLIKFNVELLPDKLLQP
IIQSRVGIALNPIMEIISMELIVEFLREGGLRLPSKIGQTLSVVGGIIIGDAAIKSHLVSSTTLLVVGVSTVATFLIPNY
EMSLTIRILKFPILFLTNALGIIGVSIGWFFILVELCSLDSMGVPYLQFKKSDMKDIFIRAPLWKMKKRPEAIPNKNPVR
QEDFRKKFRGNNNGK

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 56323; Mature: 56323

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDKLDDKIKPILDKLNSPDKFNVKKINLGKGNSIKVALVYDKDLIDRNIISDYILKPLM
CCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHHHH
LHVEESFTGKENITEILMEKYICVDDTIIKTDNEEITDFIKKGSTAIFVPNSENTIIINT
HHHHHCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCEEEEECCCCEEEEEE
VSKRYKTIFPPEIETSIRGPKEAFTESIEDNLSIINRRIKDKNLRAERLIVGERSQTEVA
CHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCEEE
IIYIEDIADEKLVNKIRERVNLIKVDHIKNAGYIEEYIENNSYTVFPQSFTTERPDVMAV
EEEEECCCHHHHHHHHHHHHCEEEEECCCCCCHHHHHHCCCCEEEECCCCCCCCCCEEEE
NIMEGKIGILMEGSQQGITLPAIFIEFFQTVEDYNQKFMLSTVIRFFRVIAVILVLSLTP
EEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYLTLIKFNVELLPDKLLQPIIQSRVGIALNPIMEIISMELIVEFLREGGLRLPSKIGQT
HHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LSVVGGIIIGDAAIKSHLVSSTTLLVVGVSTVATFLIPNYEMSLTIRILKFPILFLTNAL
HHHHHHHHCCHHHHHHHHHCCHHEEEEEHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHH
GIIGVSIGWFFILVELCSLDSMGVPYLQFKKSDMKDIFIRAPLWKMKKRPEAIPNKNPVR
HHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHEEEECCHHHHHCCCCCCCCCCCCC
QEDFRKKFRGNNNGK
HHHHHHHHCCCCCCC
>Mature Secondary Structure
MRDKLDDKIKPILDKLNSPDKFNVKKINLGKGNSIKVALVYDKDLIDRNIISDYILKPLM
CCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHHHH
LHVEESFTGKENITEILMEKYICVDDTIIKTDNEEITDFIKKGSTAIFVPNSENTIIINT
HHHHHCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCEEEEECCCCEEEEEE
VSKRYKTIFPPEIETSIRGPKEAFTESIEDNLSIINRRIKDKNLRAERLIVGERSQTEVA
CHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCEEE
IIYIEDIADEKLVNKIRERVNLIKVDHIKNAGYIEEYIENNSYTVFPQSFTTERPDVMAV
EEEEECCCHHHHHHHHHHHHCEEEEECCCCCCHHHHHHCCCCEEEECCCCCCCCCCEEEE
NIMEGKIGILMEGSQQGITLPAIFIEFFQTVEDYNQKFMLSTVIRFFRVIAVILVLSLTP
EEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYLTLIKFNVELLPDKLLQPIIQSRVGIALNPIMEIISMELIVEFLREGGLRLPSKIGQT
HHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LSVVGGIIIGDAAIKSHLVSSTTLLVVGVSTVATFLIPNYEMSLTIRILKFPILFLTNAL
HHHHHHHHCCHHHHHHHHHCCHHEEEEEHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHH
GIIGVSIGWFFILVELCSLDSMGVPYLQFKKSDMKDIFIRAPLWKMKKRPEAIPNKNPVR
HHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHEEEECCHHHHHCCCCCCCCCCCCC
QEDFRKKFRGNNNGK
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]