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The map label for this gene is 170754757

Identifier: 170754757

GI number: 170754757

Start: 2483155

End: 2483391

Strand: Reverse

Name: 170754757

Synonym: CLD_2280

Alternate gene names: NA

Gene position: 2483391-2483155 (Counterclockwise)

Preceding gene: 170755965

Following gene: 170754825

Centisome position: 62.74

GC content: 30.38

Gene sequence:

>237_bases
ATGAAAAATAAATTAAAACAGTTTCGTGAAAATTTAGGATTAACGCAAGAGCAATTAGGTGAACTTGTAGGTGTATCAAG
ACAAGCAATTAATGCTATTGAAACAGGAAAATTTGAACCATCTATTTGGTTGGCTTATGATATTGCAAAAGTATTCCATG
ACACTATAGAAGAAGTTTTCCTTTTTGAAGAAAGTGAAAGAAAATCAAGATCAGAGAAAAGTAGAGGTGTAGTTTAA

Upstream 100 bases:

>100_bases
GAAGGTTTATTTACTATATACTATGTAAGGTTTACTTGACACAAGGGTAAAGTAATACTATATTAATAATGTAATGTCAA
CATTAAAGGAGTGATACTTG

Downstream 100 bases:

>100_bases
ATGGCATTAAGACAAATTAGATTGTTTGATGATGAAATATTAAGAAAAGAGAGTAAGGTAGTTGAGATTATAGACGATAA
AATAAGACAAATATTAAATG

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MKNKLKQFRENLGLTQEQLGELVGVSRQAINAIETGKFEPSIWLAYDIAKVFHDTIEEVFLFEESERKSRSEKSRGVV

Sequences:

>Translated_78_residues
MKNKLKQFRENLGLTQEQLGELVGVSRQAINAIETGKFEPSIWLAYDIAKVFHDTIEEVFLFEESERKSRSEKSRGVV
>Mature_78_residues
MKNKLKQFRENLGLTQEQLGELVGVSRQAINAIETGKFEPSIWLAYDIAKVFHDTIEEVFLFEESERKSRSEKSRGVV

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 9000; Mature: 9000

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKLKQFRENLGLTQEQLGELVGVSRQAINAIETGKFEPSIWLAYDIAKVFHDTIEEVF
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
LFEESERKSRSEKSRGVV
HHCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MKNKLKQFRENLGLTQEQLGELVGVSRQAINAIETGKFEPSIWLAYDIAKVFHDTIEEVF
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
LFEESERKSRSEKSRGVV
HHCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]