| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754755
Identifier: 170754755
GI number: 170754755
Start: 767627
End: 768685
Strand: Reverse
Name: 170754755
Synonym: CLD_0114
Alternate gene names: NA
Gene position: 768685-767627 (Counterclockwise)
Preceding gene: 170755788
Following gene: 170756624
Centisome position: 19.42
GC content: 35.6
Gene sequence:
>1059_bases ATGTCTTGCGATAAAAATGATTGCATTAGCATGGTATTTTCTATGACTAATGAATTAAATAACCGTGTTGTTGCTTTTAA GAGAGATAACATGGGAATTCTATCTTGCCCAAAAGTTTATAGAACAGGCGGAAGTGGGACAGGCTTACGGCAAGTGGATC CCCTAGGATCTCAAGGATCAATTGCTTTATCATGTGATGGTAACTTTCTATTTGTGGTTAACGCCGGCAGTAATAGTATA AGTAGCTTTGAGATCTCTGAATGGGGTCTTGATCTTGTTTGTGTAGTACCATCTGGTGGTATTTTCCCTAATAGCTTAAC TATAAATAAGCAGAATCTTTATGTAACTAATTCCGGTAACCCTCCTAGATCTCCTGCAAATGTTACTGGTTTTCATATTG AATCAGATGGACACCTTAGAATTATAAAAGGTTCTCAAAGACCATTGAGTTCAGATGCGGCTCAATCAAAATGTATTTCT TCAAATGTTTGCGGTGATAAACTTGTTATAAGCGAAGGGATAACAAATAATCTCAGTGTTTATAAAGTAAACCCCAATGG AAGTCTAATCGGTCCAATTGTAAATCCTTCTAATGGCGTAGGTCCTTTTGGCTCAGCTTATCTCAATAATAATATTTTGC TAGTTACTGAGGTAACTTCAAATGCATTATCATCCTACAAGGTTAGAAATAATGGTATTCTTGATGTTATTAGTGGTTCT GTCCCAAATAATCAAGCGGCAACTTGTTGGGTTTCAGTTAATCCTAATGAGAATCATGCTTATACCTCTAACGCTGGCAG TAGCACAATAACTCGTTATGATATTAACCATAGAGGAATTTTGACTGCAATTGAAAGTATACCAAGTACGCCTAATAGAA CAGGAGCTCCAATTGATAGTGGAATAGATAAATGTGGGCAAAACTTTTATGTTTTAAATGGTAACGAAGGTTCAATAAGT GTATTTGAAATTGAGGGAAATGGGCATTTAGTTTTATTACAAATATTTCAAGATACAAAATTACCACAAATTGGTGCGCA AGGAATGGCAATACTCTAA
Upstream 100 bases:
>100_bases TTCTAGTACATAAAGATTGTTTAACCATTTCATGAATGATACATATAATAGATTATGATTAGACTATAAATTAATCTATA TTTTAAAGGAGATTGATAAA
Downstream 100 bases:
>100_bases ATATCAATAAATTATATTTCTAAAATGCAAATACAGTTTAAGTTTAAAACAAACAGCCTAAAATTAAGGTATTATAAGAG GATGTCTCAAAATAGCCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MSCDKNDCISMVFSMTNELNNRVVAFKRDNMGILSCPKVYRTGGSGTGLRQVDPLGSQGSIALSCDGNFLFVVNAGSNSI SSFEISEWGLDLVCVVPSGGIFPNSLTINKQNLYVTNSGNPPRSPANVTGFHIESDGHLRIIKGSQRPLSSDAAQSKCIS SNVCGDKLVISEGITNNLSVYKVNPNGSLIGPIVNPSNGVGPFGSAYLNNNILLVTEVTSNALSSYKVRNNGILDVISGS VPNNQAATCWVSVNPNENHAYTSNAGSSTITRYDINHRGILTAIESIPSTPNRTGAPIDSGIDKCGQNFYVLNGNEGSIS VFEIEGNGHLVLLQIFQDTKLPQIGAQGMAIL
Sequences:
>Translated_352_residues MSCDKNDCISMVFSMTNELNNRVVAFKRDNMGILSCPKVYRTGGSGTGLRQVDPLGSQGSIALSCDGNFLFVVNAGSNSI SSFEISEWGLDLVCVVPSGGIFPNSLTINKQNLYVTNSGNPPRSPANVTGFHIESDGHLRIIKGSQRPLSSDAAQSKCIS SNVCGDKLVISEGITNNLSVYKVNPNGSLIGPIVNPSNGVGPFGSAYLNNNILLVTEVTSNALSSYKVRNNGILDVISGS VPNNQAATCWVSVNPNENHAYTSNAGSSTITRYDINHRGILTAIESIPSTPNRTGAPIDSGIDKCGQNFYVLNGNEGSIS VFEIEGNGHLVLLQIFQDTKLPQIGAQGMAIL >Mature_351_residues SCDKNDCISMVFSMTNELNNRVVAFKRDNMGILSCPKVYRTGGSGTGLRQVDPLGSQGSIALSCDGNFLFVVNAGSNSIS SFEISEWGLDLVCVVPSGGIFPNSLTINKQNLYVTNSGNPPRSPANVTGFHIESDGHLRIIKGSQRPLSSDAAQSKCISS NVCGDKLVISEGITNNLSVYKVNPNGSLIGPIVNPSNGVGPFGSAYLNNNILLVTEVTSNALSSYKVRNNGILDVISGSV PNNQAATCWVSVNPNENHAYTSNAGSSTITRYDINHRGILTAIESIPSTPNRTGAPIDSGIDKCGQNFYVLNGNEGSISV FEIEGNGHLVLLQIFQDTKLPQIGAQGMAIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37232; Mature: 37101
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCDKNDCISMVFSMTNELNNRVVAFKRDNMGILSCPKVYRTGGSGTGLRQVDPLGSQGS CCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCEEECCHHHCCCCCCCCCCEECCCCCCCC IALSCDGNFLFVVNAGSNSISSFEISEWGLDLVCVVPSGGIFPNSLTINKQNLYVTNSGN EEEEECCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCEEEEECCEEEEECCCC PPRSPANVTGFHIESDGHLRIIKGSQRPLSSDAAQSKCISSNVCGDKLVISEGITNNLSV CCCCCCCEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCEEE YKVNPNGSLIGPIVNPSNGVGPFGSAYLNNNILLVTEVTSNALSSYKVRNNGILDVISGS EEECCCCCEEEEEECCCCCCCCCCHHEECCCEEEEEECCCCCHHEEEECCCCEEEEEECC VPNNQAATCWVSVNPNENHAYTSNAGSSTITRYDINHRGILTAIESIPSTPNRTGAPIDS CCCCCCEEEEEEECCCCCCEEECCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCHHH GIDKCGQNFYVLNGNEGSISVFEIEGNGHLVLLQIFQDTKLPQIGAQGMAIL HHHHHCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEC >Mature Secondary Structure SCDKNDCISMVFSMTNELNNRVVAFKRDNMGILSCPKVYRTGGSGTGLRQVDPLGSQGS CCCHHHHHHHHHHHHHHCCCEEEEEEECCCCEEECCHHHCCCCCCCCCCEECCCCCCCC IALSCDGNFLFVVNAGSNSISSFEISEWGLDLVCVVPSGGIFPNSLTINKQNLYVTNSGN EEEEECCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCEEEEECCEEEEECCCC PPRSPANVTGFHIESDGHLRIIKGSQRPLSSDAAQSKCISSNVCGDKLVISEGITNNLSV CCCCCCCEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCEEE YKVNPNGSLIGPIVNPSNGVGPFGSAYLNNNILLVTEVTSNALSSYKVRNNGILDVISGS EEECCCCCEEEEEECCCCCCCCCCHHEECCCEEEEEECCCCCHHEEEECCCCEEEEEECC VPNNQAATCWVSVNPNENHAYTSNAGSSTITRYDINHRGILTAIESIPSTPNRTGAPIDS CCCCCCEEEEEEECCCCCCEEECCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCHHH GIDKCGQNFYVLNGNEGSISVFEIEGNGHLVLLQIFQDTKLPQIGAQGMAIL HHHHHCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA