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The map label for this gene is puuR [H]

Identifier: 170754718

GI number: 170754718

Start: 421995

End: 422540

Strand: Reverse

Name: puuR [H]

Synonym: CLD_0410

Alternate gene names: 170754718

Gene position: 422540-421995 (Counterclockwise)

Preceding gene: 170755074

Following gene: 170757786

Centisome position: 10.67

GC content: 29.49

Gene sequence:

>546_bases
ATGATCAATGAAATTGCTGAAAAAATCAGAAATCTAAGAAAAGAAAAAAATTTAACCTTAAAAGATCTTAGTGAAAAAAC
AGGCTTATCTATAAGTTTTTTATCACAGGTAGAAAATAATTCCTCTTCTCTTGCAATTACTTCTTTGAAAAAAATTGCAG
ATGCGCTAAATGTACCTATAACTTACTTTTTCAAAAGTCCAGAGCTTCACAAATTTTTAGTAAAAAAACAAGAAAGAGAA
GTTTTTGAACTTGAAGGCTCTAGTTCTAAGTTCATAAAATTAAGTGGTAATTTTACGGAAAGAGCTATGGAGTCTATATT
AGTCGTAATTCCTGCTGAAAAGCAACATGGTCATAAATTTAGCCACCCAGGAGAAGAGTTTATATATGTATTAGAAGGAG
CTATTATAGCTAATATAGATGGGGAAGAATATTTTGTAAACGAAGGTGATTCTATTCACTTTCCTTCTACAATACCACAT
ATACTTTCTAATCCCCTTAAAACAGATTCTAAAATATTAACAGTAGTATACCCTGCAATTTTTTAA

Upstream 100 bases:

>100_bases
TAGGATAATAATCTTGAATTATCAAGGTTATTATGCTATTATTATTGAAAGAAAAGTAAGATTTTTCTGGATTTTGCTAA
TATATATATTGGAGGTCAAA

Downstream 100 bases:

>100_bases
ACCCAATTATATAATTGATATTCATGTGCTATTTATAGATAAAAGATTTCCAAATATTAAAGTAAATTTGTATTTACAAA
TATTTGGAAATCTTTTTTTA

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MINEIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYFFKSPELHKFLVKKQERE
VFELEGSSSKFIKLSGNFTERAMESILVVIPAEKQHGHKFSHPGEEFIYVLEGAIIANIDGEEYFVNEGDSIHFPSTIPH
ILSNPLKTDSKILTVVYPAIF

Sequences:

>Translated_181_residues
MINEIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYFFKSPELHKFLVKKQERE
VFELEGSSSKFIKLSGNFTERAMESILVVIPAEKQHGHKFSHPGEEFIYVLEGAIIANIDGEEYFVNEGDSIHFPSTIPH
ILSNPLKTDSKILTVVYPAIF
>Mature_181_residues
MINEIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYFFKSPELHKFLVKKQERE
VFELEGSSSKFIKLSGNFTERAMESILVVIPAEKQHGHKFSHPGEEFIYVLEGAIIANIDGEEYFVNEGDSIHFPSTIPH
ILSNPLKTDSKILTVVYPAIF

Specific function: Represses puuD [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787557, Length=178, Percent_Identity=27.5280898876405, Blast_Score=70, Evalue=6e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 20395; Mature: 20395

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINEIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPI
CHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEHHHHCCCCCCCHHHHHHHHHHHHCCCE
TYFFKSPELHKFLVKKQEREVFELEGSSSKFIKLSGNFTERAMESILVVIPAEKQHGHKF
EEEECCCHHHHHHHHHHHHHHEEECCCCCCEEEEECCHHHHHHCCEEEEEECCCCCCCCC
SHPGEEFIYVLEGAIIANIDGEEYFVNEGDSIHFPSTIPHILSNPLKTDSKILTVVYPAI
CCCHHHEEEEECCEEEEECCCCEEEECCCCCEECCCCCHHHHCCCCCCCCEEEEEEECCC
F
C
>Mature Secondary Structure
MINEIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPI
CHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEHHHHCCCCCCCHHHHHHHHHHHHCCCE
TYFFKSPELHKFLVKKQEREVFELEGSSSKFIKLSGNFTERAMESILVVIPAEKQHGHKF
EEEECCCHHHHHHHHHHHHHHEEECCCCCCEEEEECCHHHHHHCCEEEEEECCCCCCCCC
SHPGEEFIYVLEGAIIANIDGEEYFVNEGDSIHFPSTIPHILSNPLKTDSKILTVVYPAI
CCCHHHEEEEECCEEEEECCCCEEEECCCCCEECCCCCHHHHCCCCCCCCEEEEEEECCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1840553 [H]