| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is resE [H]
Identifier: 170754687
GI number: 170754687
Start: 2935522
End: 2937630
Strand: Reverse
Name: resE [H]
Synonym: CLD_1811
Alternate gene names: 170754687
Gene position: 2937630-2935522 (Counterclockwise)
Preceding gene: 170755730
Following gene: 170756341
Centisome position: 74.22
GC content: 23.85
Gene sequence:
>2109_bases ATGGAACCAATAGGAAGTGTTTTTTTGGAAGATAAAAGTACAATAAAAAGTATAATGGATAGCATTCCTTATTCATGTTA TATTGTAAACGATGAATATGAATTGCTTTATGTAAATAGTGTAGCTCTAAAGTTAAGCAAAGAGCTAAAAAGAAAATATA GTTCTAAGCTACGGCCTGGAGAAGAAAAAACATTGATAGATTGTTTAGATGAATACGAAATAAATTTTATCGATGGTGAA ACCGTTACAGAAAAAAACTTTCCTGTTTTTATAGCTCTTAAAGAACAAAAGGAGATAAAAGAAATTCCATTAATATTTAC AAAGAATAATTATGAAAAGGTGTGTTTTAGTTTAACTGTAATACCTATAAATTTAGAAGGGACCAAAAAAGGAGCTTTAG TAAATTTAATGGATATTACTCAAGAGCGTATCTATAAAGAAACCATAGAAAAGGGTAAGGAAGAGATTTTAAATATTTCA AAACAAATAAAGAATAAGAGTGAGATTATAGACATATTAAGAAAAAAAGAATTAGATTATATTAAATATCTTAATAATGT AATTAATAATATATCTGAAGGAATATTGGTTTTTGATAAACATTCAAAATTAATTTTATGGAATAAAGCTATTGAACAAA TAGGTGAAATGAAAATAAAAAAAATATTGGACATTGAAGAAATAATTAATGAGTATGATATATACATACTAGATGATCAT AAAAATATGAAATATAAAATAAAAAAGATGAATCCAGATTATAATAGCAGTGTAAAAGACTTATTATTGAAATTAGTAAA GAAAGATACTAATAAGATTAAATATATAGAGTATAACAGTAATCCCATTATGGATGAAAATAATGAGATACTTTATACTA TATCAAGTATAAAGAATGTTACAGATTTAATAGAAAGTCAAATAATATCTGAAGAGAGAGCGGAATTTATAAAATATGTA GTAGATTGTATAGAGCTACCTTTAGCAGTATTAGATTATCCTGATTTAACATATAAATTAGTTAATGAAAGATATGAAGA GTTAGTAGAACGATTGCATACTAAAAAAATAAAGGGAAATTTATTTGGAAATACAGTGGAGAATATTTTTAGAAAAGAAG AATTTAAAGAGCAGTTAGAAGTATTACAGAAAATGAAAGATGGAACTATTAAAGAGTATACATTTTCTCCTAAAAAATTT ATTCTACAGTCAGGAGAAGAAAGATTTTTTAAAGTAAGATATATTTATCATGAAACTAAAAATAAAAAAAGAGTTCACAT ACATGGTTCTGATGTAACAGAAGAGTTTAAAAGTAATTTGGAACTAGAAAAGGTGAATAAACTTAAAGATGAGTTTTTTA CTATAATATCTCATGAATTAAGAACTCCATTGACCATAATATATTCTTCATTGCAATTAGCTTATGATATTTATCCAGAG GATATAAACTTAAATATCGATAAGATTTTAAAAAGAATAAATCAAAATACAGCTAGACTTTTAAAGCTTATAAATAATAT ATTAGATATATCAAAAGCAGAAGCAGGATTTTTAACTTTAAATAATGAATATTTTGATATAGTATTGGAAACAGAAAATA TAGTTAATTCAATAACAAATTATGCTAATTCTAAAAATATAAATTTAATATTTGATACTACGAAAGAAGAAGAAGAGGTC TGGATTGATAAAGATAAATATGAAAGAATATTATTAAATTTATTATCTAATGCTGTAAAATTCACGCCAGAAAACAAATC TATATATGTTACTCTTAAAATATATAAAAATAATTTTAAATTAATAGTAAAGGATGAAGGAAGAGGAATACCTAAAGAAA AAATAGATTGTATTTTTAACAGATTTGCTCAAGTTAATAGTTCATTATCAAGAAGTGCAGAAGGGACAGGTATAGGACTT TCATTAGTTAAGAAAATTGTGGATCTCATGGATGGAGAAATAAAGGTATATAGTATTTTGGGGAAGGGAACTACATTTAC TGTTAAAATAAATAAAAATATGAATAAATGTTATGAAAAGATAAAGAAAGCTGTTATACACAATGATATTTCTAAAAAAA TACATATAGAGTTTTCAGACATAAATTAG
Upstream 100 bases:
>100_bases GTGGTATAACTTACTTTAAGTCGTAATTTCCTTAGAAGTTGACTAAGGCTACAGAAAAAGAGTAAACTATATAAAGCAAT GTATATATTAGGGGGGAAAT
Downstream 100 bases:
>100_bases AAAATATATAAAGCCCTATTTAGGTAAATAAAATTTACAATTAAATAGGGCTTTTATTGTTAATGCATAGTAGGCCCTTG AACCAATATGGTGAATTTTA
Product: sensory box histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 702; Mature: 702
Protein sequence:
>702_residues MEPIGSVFLEDKSTIKSIMDSIPYSCYIVNDEYELLYVNSVALKLSKELKRKYSSKLRPGEEKTLIDCLDEYEINFIDGE TVTEKNFPVFIALKEQKEIKEIPLIFTKNNYEKVCFSLTVIPINLEGTKKGALVNLMDITQERIYKETIEKGKEEILNIS KQIKNKSEIIDILRKKELDYIKYLNNVINNISEGILVFDKHSKLILWNKAIEQIGEMKIKKILDIEEIINEYDIYILDDH KNMKYKIKKMNPDYNSSVKDLLLKLVKKDTNKIKYIEYNSNPIMDENNEILYTISSIKNVTDLIESQIISEERAEFIKYV VDCIELPLAVLDYPDLTYKLVNERYEELVERLHTKKIKGNLFGNTVENIFRKEEFKEQLEVLQKMKDGTIKEYTFSPKKF ILQSGEERFFKVRYIYHETKNKKRVHIHGSDVTEEFKSNLELEKVNKLKDEFFTIISHELRTPLTIIYSSLQLAYDIYPE DINLNIDKILKRINQNTARLLKLINNILDISKAEAGFLTLNNEYFDIVLETENIVNSITNYANSKNINLIFDTTKEEEEV WIDKDKYERILLNLLSNAVKFTPENKSIYVTLKIYKNNFKLIVKDEGRGIPKEKIDCIFNRFAQVNSSLSRSAEGTGIGL SLVKKIVDLMDGEIKVYSILGKGTTFTVKINKNMNKCYEKIKKAVIHNDISKKIHIEFSDIN
Sequences:
>Translated_702_residues MEPIGSVFLEDKSTIKSIMDSIPYSCYIVNDEYELLYVNSVALKLSKELKRKYSSKLRPGEEKTLIDCLDEYEINFIDGE TVTEKNFPVFIALKEQKEIKEIPLIFTKNNYEKVCFSLTVIPINLEGTKKGALVNLMDITQERIYKETIEKGKEEILNIS KQIKNKSEIIDILRKKELDYIKYLNNVINNISEGILVFDKHSKLILWNKAIEQIGEMKIKKILDIEEIINEYDIYILDDH KNMKYKIKKMNPDYNSSVKDLLLKLVKKDTNKIKYIEYNSNPIMDENNEILYTISSIKNVTDLIESQIISEERAEFIKYV VDCIELPLAVLDYPDLTYKLVNERYEELVERLHTKKIKGNLFGNTVENIFRKEEFKEQLEVLQKMKDGTIKEYTFSPKKF ILQSGEERFFKVRYIYHETKNKKRVHIHGSDVTEEFKSNLELEKVNKLKDEFFTIISHELRTPLTIIYSSLQLAYDIYPE DINLNIDKILKRINQNTARLLKLINNILDISKAEAGFLTLNNEYFDIVLETENIVNSITNYANSKNINLIFDTTKEEEEV WIDKDKYERILLNLLSNAVKFTPENKSIYVTLKIYKNNFKLIVKDEGRGIPKEKIDCIFNRFAQVNSSLSRSAEGTGIGL SLVKKIVDLMDGEIKVYSILGKGTTFTVKINKNMNKCYEKIKKAVIHNDISKKIHIEFSDIN >Mature_702_residues MEPIGSVFLEDKSTIKSIMDSIPYSCYIVNDEYELLYVNSVALKLSKELKRKYSSKLRPGEEKTLIDCLDEYEINFIDGE TVTEKNFPVFIALKEQKEIKEIPLIFTKNNYEKVCFSLTVIPINLEGTKKGALVNLMDITQERIYKETIEKGKEEILNIS KQIKNKSEIIDILRKKELDYIKYLNNVINNISEGILVFDKHSKLILWNKAIEQIGEMKIKKILDIEEIINEYDIYILDDH KNMKYKIKKMNPDYNSSVKDLLLKLVKKDTNKIKYIEYNSNPIMDENNEILYTISSIKNVTDLIESQIISEERAEFIKYV VDCIELPLAVLDYPDLTYKLVNERYEELVERLHTKKIKGNLFGNTVENIFRKEEFKEQLEVLQKMKDGTIKEYTFSPKKF ILQSGEERFFKVRYIYHETKNKKRVHIHGSDVTEEFKSNLELEKVNKLKDEFFTIISHELRTPLTIIYSSLQLAYDIYPE DINLNIDKILKRINQNTARLLKLINNILDISKAEAGFLTLNNEYFDIVLETENIVNSITNYANSKNINLIFDTTKEEEEV WIDKDKYERILLNLLSNAVKFTPENKSIYVTLKIYKNNFKLIVKDEGRGIPKEKIDCIFNRFAQVNSSLSRSAEGTGIGL SLVKKIVDLMDGEIKVYSILGKGTTFTVKINKNMNKCYEKIKKAVIHNDISKKIHIEFSDIN
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=274, Percent_Identity=31.7518248175182, Blast_Score=123, Evalue=5e-29, Organism=Escherichia coli, GI145693157, Length=234, Percent_Identity=32.4786324786325, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1789149, Length=242, Percent_Identity=31.8181818181818, Blast_Score=116, Evalue=5e-27, Organism=Escherichia coli, GI1788713, Length=262, Percent_Identity=33.587786259542, Blast_Score=113, Evalue=5e-26, Organism=Escherichia coli, GI1786600, Length=313, Percent_Identity=27.7955271565495, Blast_Score=102, Evalue=7e-23, Organism=Escherichia coli, GI1786912, Length=235, Percent_Identity=27.6595744680851, Blast_Score=102, Evalue=8e-23, Organism=Escherichia coli, GI87081816, Length=244, Percent_Identity=29.5081967213115, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1786783, Length=229, Percent_Identity=27.0742358078603, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1790436, Length=221, Percent_Identity=27.6018099547511, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1788393, Length=234, Percent_Identity=24.7863247863248, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1790861, Length=231, Percent_Identity=23.3766233766234, Blast_Score=76, Evalue=6e-15, Organism=Escherichia coli, GI1788549, Length=273, Percent_Identity=24.5421245421245, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1787894, Length=212, Percent_Identity=25.9433962264151, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI87082128, Length=228, Percent_Identity=23.6842105263158, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1790551, Length=227, Percent_Identity=22.0264317180617, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1788279, Length=236, Percent_Identity=25.4237288135593, Blast_Score=66, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 82054; Mature: 82054
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPIGSVFLEDKSTIKSIMDSIPYSCYIVNDEYELLYVNSVALKLSKELKRKYSSKLRPG CCCCCCCEECCHHHHHHHHHCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHCCCCC EEKTLIDCLDEYEINFIDGETVTEKNFPVFIALKEQKEIKEIPLIFTKNNYEKVCFSLTV CCHHHHHHHHHCCEEEECCCEEECCCCCEEEEECCCCCHHHCCEEEECCCCEEEEEEEEE IPINLEGTKKGALVNLMDITQERIYKETIEKGKEEILNISKQIKNKSEIIDILRKKELDY EEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHH IKYLNNVINNISEGILVFDKHSKLILWNKAIEQIGEMKIKKILDIEEIINEYDIYILDDH HHHHHHHHHHHCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECC KNMKYKIKKMNPDYNSSVKDLLLKLVKKDTNKIKYIEYNSNPIMDENNEILYTISSIKNV CCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEHHHHHHH TDLIESQIISEERAEFIKYVVDCIELPLAVLDYPDLTYKLVNERYEELVERLHTKKIKGN HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC LFGNTVENIFRKEEFKEQLEVLQKMKDGTIKEYTFSPKKFILQSGEERFFKVRYIYHETK CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCCEEEEEEEEEECC NKKRVHIHGSDVTEEFKSNLELEKVNKLKDEFFTIISHELRTPLTIIYSSLQLAYDIYPE CCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCC DINLNIDKILKRINQNTARLLKLINNILDISKAEAGFLTLNNEYFDIVLETENIVNSITN CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECHHHHHHHHH YANSKNINLIFDTTKEEEEVWIDKDKYERILLNLLSNAVKFTPENKSIYVTLKIYKNNFK HCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEEECCCE LIVKDEGRGIPKEKIDCIFNRFAQVNSSLSRSAEGTGIGLSLVKKIVDLMDGEIKVYSIL EEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEEE GKGTTFTVKINKNMNKCYEKIKKAVIHNDISKKIHIEFSDIN CCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEECCC >Mature Secondary Structure MEPIGSVFLEDKSTIKSIMDSIPYSCYIVNDEYELLYVNSVALKLSKELKRKYSSKLRPG CCCCCCCEECCHHHHHHHHHCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHCCCCC EEKTLIDCLDEYEINFIDGETVTEKNFPVFIALKEQKEIKEIPLIFTKNNYEKVCFSLTV CCHHHHHHHHHCCEEEECCCEEECCCCCEEEEECCCCCHHHCCEEEECCCCEEEEEEEEE IPINLEGTKKGALVNLMDITQERIYKETIEKGKEEILNISKQIKNKSEIIDILRKKELDY EEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHH IKYLNNVINNISEGILVFDKHSKLILWNKAIEQIGEMKIKKILDIEEIINEYDIYILDDH HHHHHHHHHHHCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECC KNMKYKIKKMNPDYNSSVKDLLLKLVKKDTNKIKYIEYNSNPIMDENNEILYTISSIKNV CCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEHHHHHHH TDLIESQIISEERAEFIKYVVDCIELPLAVLDYPDLTYKLVNERYEELVERLHTKKIKGN HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC LFGNTVENIFRKEEFKEQLEVLQKMKDGTIKEYTFSPKKFILQSGEERFFKVRYIYHETK CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCCEEEEEEEEEECC NKKRVHIHGSDVTEEFKSNLELEKVNKLKDEFFTIISHELRTPLTIIYSSLQLAYDIYPE CCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCC DINLNIDKILKRINQNTARLLKLINNILDISKAEAGFLTLNNEYFDIVLETENIVNSITN CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECHHHHHHHHH YANSKNINLIFDTTKEEEEVWIDKDKYERILLNLLSNAVKFTPENKSIYVTLKIYKNNFK HCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEEECCCE LIVKDEGRGIPKEKIDCIFNRFAQVNSSLSRSAEGTGIGLSLVKKIVDLMDGEIKVYSIL EEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEEE GKGTTFTVKINKNMNKCYEKIKKAVIHNDISKKIHIEFSDIN CCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]