| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754685
Identifier: 170754685
GI number: 170754685
Start: 3017032
End: 3017430
Strand: Reverse
Name: 170754685
Synonym: CLD_1747
Alternate gene names: NA
Gene position: 3017430-3017032 (Counterclockwise)
Preceding gene: 170755983
Following gene: 170757658
Centisome position: 76.23
GC content: 26.07
Gene sequence:
>399_bases ATGAAAAAAATAATGACTTTTATTATGGCAACAGTATTAACATTAGGAATTTTTATGATACCAAAGCAAGTTTCAGCATC AGAAAATAAGGAGGTAGTAGCATATAGAATTTCCATGCCTGTTAATTATAATACCTTAGATACAAGCAAAATAAAGAATG CAACATTGCATTATGGTGTAAATGGATGGAAAGATGTTAAAGATGTTCAATTAAACAGAAGTATAGTAGATTATTATATG GGAAAAACTTTTGAAAGTTTTTATACAACTATTTATGTAGAAAAAGGTTCAAAAATAGATTATTGCTTTAAACAAGAATT TTATGGAGAGGGAACAAAATGGGATAACAATAATAATGAAGATTATCATATATTTGTAACAGAAAGTAACGTTAAATAG
Upstream 100 bases:
>100_bases ATGAAACCTGTAATCAAAAGGGGCCCTAATTGATAAGTTACAAATATAATTAATGAATATTAAAATATATAAAATGTACT TAGAATTAGGAGGAAATAAA
Downstream 100 bases:
>100_bases TTTAATGTAAATATAGTATTTTATTTATTATTATATATTAATCTCATTATAATTGTCTTTGTCAATTAAATAATTTAATG AAGAAGTATTTATTAAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MKKIMTFIMATVLTLGIFMIPKQVSASENKEVVAYRISMPVNYNTLDTSKIKNATLHYGVNGWKDVKDVQLNRSIVDYYM GKTFESFYTTIYVEKGSKIDYCFKQEFYGEGTKWDNNNNEDYHIFVTESNVK
Sequences:
>Translated_132_residues MKKIMTFIMATVLTLGIFMIPKQVSASENKEVVAYRISMPVNYNTLDTSKIKNATLHYGVNGWKDVKDVQLNRSIVDYYM GKTFESFYTTIYVEKGSKIDYCFKQEFYGEGTKWDNNNNEDYHIFVTESNVK >Mature_132_residues MKKIMTFIMATVLTLGIFMIPKQVSASENKEVVAYRISMPVNYNTLDTSKIKNATLHYGVNGWKDVKDVQLNRSIVDYYM GKTFESFYTTIYVEKGSKIDYCFKQEFYGEGTKWDNNNNEDYHIFVTESNVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15376; Mature: 15376
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIMTFIMATVLTLGIFMIPKQVSASENKEVVAYRISMPVNYNTLDTSKIKNATLHYGV CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEECC NGWKDVKDVQLNRSIVDYYMGKTFESFYTTIYVEKGSKIDYCFKQEFYGEGTKWDNNNNE CCCCCCHHHHHHHHHHHHHHCCCHHCEEEEEEEECCCCCCCEEHHHHCCCCCCCCCCCCC DYHIFVTESNVK CEEEEEECCCCC >Mature Secondary Structure MKKIMTFIMATVLTLGIFMIPKQVSASENKEVVAYRISMPVNYNTLDTSKIKNATLHYGV CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEECC NGWKDVKDVQLNRSIVDYYMGKTFESFYTTIYVEKGSKIDYCFKQEFYGEGTKWDNNNNE CCCCCCHHHHHHHHHHHHHHCCCHHCEEEEEEEECCCCCCCEEHHHHCCCCCCCCCCCCC DYHIFVTESNVK CEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA