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The map label for this gene is rimP [H]

Identifier: 170754643

GI number: 170754643

Start: 2540825

End: 2541286

Strand: Reverse

Name: rimP [H]

Synonym: CLD_2218

Alternate gene names: 170754643

Gene position: 2541286-2540825 (Counterclockwise)

Preceding gene: 170754900

Following gene: 170754323

Centisome position: 64.2

GC content: 25.76

Gene sequence:

>462_bases
ATGAGTAAGCATAGTTTAATTGAAAATCTTAAAAAGCAAATAGAACCTATTGCTGAAGGTTTAGACTATGAATTATATCA
TATAGAATTTGTTAAAGAAGGAAAAGAAAATTATTTAAGAATATATATAGATAGTGAAAATGGTGTGTCTTTAGAGGGCT
GCGAAAAAGTAAGTAGAGCAGTTAGTGAATTATTAGATGATATAGATCCAATTCAAGAAAGCTACTATTTAGAAGTTTCT
TCACCAGGAATTGACAGAGTTTTATATACAGATAAACATTTACAAAAATATAAAGGCTATAATATAGTATTAAATTTATA
TTCACCTATAGATAAAAAGAAAAAATATGAAGGTGAATTAGTAGACTTCAATGAAAATGAGATAAATATAAAGGTTGAAG
AAAACATAGTAACTATACCTAGAGAAAAAATATCAAAGACTACTTTAAAAGGGGAACTGTAA

Upstream 100 bases:

>100_bases
CAGCGCAAGTTGCGTTTTTAAATTAATATAAAATAATAGCTGATTATTTGGAAAAACTAAGTGTATAAAATATATTTTAA
AATAGCAAGGAGGGGTTTTT

Downstream 100 bases:

>100_bases
GGAGGTTAATAAAAAAATGAACCAGGAATTTGTTGAAGCATTAAGGGAAATAGTAAAAGAAAAAGGTATAAGTGCAGATC
TTTTGTTTACAACTATAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSKHSLIENLKKQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDSENGVSLEGCEKVSRAVSELLDDIDPIQESYYLEVS
SPGIDRVLYTDKHLQKYKGYNIVLNLYSPIDKKKKYEGELVDFNENEINIKVEENIVTIPREKISKTTLKGEL

Sequences:

>Translated_153_residues
MSKHSLIENLKKQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDSENGVSLEGCEKVSRAVSELLDDIDPIQESYYLEVS
SPGIDRVLYTDKHLQKYKGYNIVLNLYSPIDKKKKYEGELVDFNENEINIKVEENIVTIPREKISKTTLKGEL
>Mature_152_residues
SKHSLIENLKKQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDSENGVSLEGCEKVSRAVSELLDDIDPIQESYYLEVSS
PGIDRVLYTDKHLQKYKGYNIVLNLYSPIDKKKKYEGELVDFNENEINIKVEENIVTIPREKISKTTLKGEL

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=129, Percent_Identity=39.5348837209302, Blast_Score=100, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 17774; Mature: 17643

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKHSLIENLKKQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDSENGVSLEGCEKVSRA
CCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHH
VSELLDDIDPIQESYYLEVSSPGIDRVLYTDKHLQKYKGYNIVLNLYSPIDKKKKYEGEL
HHHHHHHHCCCCCCEEEEECCCCCCEEEECHHHHHHHCCCEEEEEECCCCCCHHCCCCCE
VDFNENEINIKVEENIVTIPREKISKTTLKGEL
EECCCCEEEEEECCCEEECCHHHHHHHHCCCCC
>Mature Secondary Structure 
SKHSLIENLKKQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDSENGVSLEGCEKVSRA
CHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHH
VSELLDDIDPIQESYYLEVSSPGIDRVLYTDKHLQKYKGYNIVLNLYSPIDKKKKYEGEL
HHHHHHHHCCCCCCEEEEECCCCCCEEEECHHHHHHHCCCEEEEEECCCCCCHHCCCCCE
VDFNENEINIKVEENIVTIPREKISKTTLKGEL
EECCCCEEEEEECCCEEECCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA