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The map label for this gene is spoIID

Identifier: 170754642

GI number: 170754642

Start: 195007

End: 196083

Strand: Direct

Name: spoIID

Synonym: CLD_0625

Alternate gene names: 170754642

Gene position: 195007-196083 (Clockwise)

Preceding gene: 170754827

Following gene: 170755377

Centisome position: 4.93

GC content: 26.83

Gene sequence:

>1077_bases
ATGAGAAGATTAAATAGGTATACTAATATTAATAAGTTAGTTATAACAATTATAAGTACTGTGTGTATTATGTTAATTTT
AAGCTTTGCTTTATCCTTTAGTGAAAACAAAGAACAAAAAGTTAAGGAAACTATAAGTAAGGTTAAGTTAGATCAGAAAA
GACAAGAAGAAAAGATTGATATAAATAAAAAATATAAAGTAAAATCAGAACCACAAGTTAGGGTTTACTTTGTTAATGAA
AAAGTAGTGAGATCAATACCCTTAGAGGAATATGTAAAGGGCGTTGTTTCAGCTGAAATGCCAGCGGAGTTTCATATAGA
AGCATTGAAAGCTCAAGCAGTAGCGGCTAGAACTTATGCTTTAGCTCATATGAAAGGGTTCGGTGAAAATCAATATAATA
AAAGAATAAATGCAGACGTGTGTGATAGTGTTCAATCTCAAGTTTTTATGCCTAAGGATAAAAGAATAAAGTCTTGGCCA
AAGGAAAAGAGAAATGAATATTGGAACAAAATAGAAGAAAGTGTTAATAGCACTAAGGGGAATGTACTTGTATATAACAA
TGAAATAGTTATGGCTCCATATTATTTTGCTACTAGTAATGGAAAAACAGAAGATAGTGAAAATGTATTTAATAGTGAAG
TTCCTTATTTAAAAAGTGTAAAAAGTCCAGGAGAAGAGAAGGCTCCTAAATTTAAGAGTAGCAAAAAAATTTCTTATGAT
CAATTTATAAAAATTATAAAAACTCAATATCCTAAGTGTACTATAAATAAAAAAGATATAAATAAAAAAATAATAATAAA
GGATAAAACAGAAAGTGGTAGTATTAAAAAAATTAAAATAGATAATATAGAAATTAAAGGTACAGAATTTAGAAAAATAT
TAGGTCTAAATTCATCTAAATTTTCATTAGAATTTAAAGATAACTATCTTATAGTAAATTGTAATGGGTATGGTCATAAT
GTTGGAATGAGTCAATGGGGGGCAAATAGTATGGGTAAATCAGGGAAAAAATATGATTATATACTTAAACATTACTATAA
AGGAATAAATATGGAAATTCTCAAATATAGTGATTAG

Upstream 100 bases:

>100_bases
TAACAAAATTATAATTAAGTTTTAGCTTATATTTTAGCATAATAAACCTGTATGAAAAATATAATTGTATAGAAAACTTT
ATTATGAAAAGAGGGAAAAC

Downstream 100 bases:

>100_bases
TATTAATAAATTTATGGATTAACATCTATAGCTATAAGTTTTTTATATGACATAGAACTATAAACAGAGTTCTTGGCTTT
AGAGGGAGTTTTTATTTTTA

Product: stage II sporulation protein D

Products: NA

Alternate protein names: Stage II sporulation protein C [H]

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MRRLNRYTNINKLVITIISTVCIMLILSFALSFSENKEQKVKETISKVKLDQKRQEEKIDINKKYKVKSEPQVRVYFVNE
KVVRSIPLEEYVKGVVSAEMPAEFHIEALKAQAVAARTYALAHMKGFGENQYNKRINADVCDSVQSQVFMPKDKRIKSWP
KEKRNEYWNKIEESVNSTKGNVLVYNNEIVMAPYYFATSNGKTEDSENVFNSEVPYLKSVKSPGEEKAPKFKSSKKISYD
QFIKIIKTQYPKCTINKKDINKKIIIKDKTESGSIKKIKIDNIEIKGTEFRKILGLNSSKFSLEFKDNYLIVNCNGYGHN
VGMSQWGANSMGKSGKKYDYILKHYYKGINMEILKYSD

Sequences:

>Translated_358_residues
MRRLNRYTNINKLVITIISTVCIMLILSFALSFSENKEQKVKETISKVKLDQKRQEEKIDINKKYKVKSEPQVRVYFVNE
KVVRSIPLEEYVKGVVSAEMPAEFHIEALKAQAVAARTYALAHMKGFGENQYNKRINADVCDSVQSQVFMPKDKRIKSWP
KEKRNEYWNKIEESVNSTKGNVLVYNNEIVMAPYYFATSNGKTEDSENVFNSEVPYLKSVKSPGEEKAPKFKSSKKISYD
QFIKIIKTQYPKCTINKKDINKKIIIKDKTESGSIKKIKIDNIEIKGTEFRKILGLNSSKFSLEFKDNYLIVNCNGYGHN
VGMSQWGANSMGKSGKKYDYILKHYYKGINMEILKYSD
>Mature_358_residues
MRRLNRYTNINKLVITIISTVCIMLILSFALSFSENKEQKVKETISKVKLDQKRQEEKIDINKKYKVKSEPQVRVYFVNE
KVVRSIPLEEYVKGVVSAEMPAEFHIEALKAQAVAARTYALAHMKGFGENQYNKRINADVCDSVQSQVFMPKDKRIKSWP
KEKRNEYWNKIEESVNSTKGNVLVYNNEIVMAPYYFATSNGKTEDSENVFNSEVPYLKSVKSPGEEKAPKFKSSKKISYD
QFIKIIKTQYPKCTINKKDINKKIIIKDKTESGSIKKIKIDNIEIKGTEFRKILGLNSSKFSLEFKDNYLIVNCNGYGHN
VGMSQWGANSMGKSGKKYDYILKHYYKGINMEILKYSD

Specific function: May act at the level of sigma-G activity or its stability. SpoIID is probably required for engulfment [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693
- InterPro:   IPR014225 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 41375; Mature: 41375

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLNRYTNINKLVITIISTVCIMLILSFALSFSENKEQKVKETISKVKLDQKRQEEKID
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
INKKYKVKSEPQVRVYFVNEKVVRSIPLEEYVKGVVSAEMPAEFHIEALKAQAVAARTYA
CCCEEEECCCCCEEEEEECCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LAHMKGFGENQYNKRINADVCDSVQSQVFMPKDKRIKSWPKEKRNEYWNKIEESVNSTKG
HHHHHCCCCCHHCCCCCHHHHHHHHHCEECCCCCHHHCCCHHHHHHHHHHHHHHHCCCCC
NVLVYNNEIVMAPYYFATSNGKTEDSENVFNSEVPYLKSVKSPGEEKAPKFKSSKKISYD
CEEEECCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCCHH
QFIKIIKTQYPKCTINKKDINKKIIIKDKTESGSIKKIKIDNIEIKGTEFRKILGLNSSK
HHHHHHHHCCCCEECCHHCCCCEEEEEECCCCCCEEEEEECCEEECCHHHHHHHCCCCCE
FSLEFKDNYLIVNCNGYGHNVGMSQWGANSMGKSGKKYDYILKHYYKGINMEILKYSD
EEEEEECCEEEEEECCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECC
>Mature Secondary Structure
MRRLNRYTNINKLVITIISTVCIMLILSFALSFSENKEQKVKETISKVKLDQKRQEEKID
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
INKKYKVKSEPQVRVYFVNEKVVRSIPLEEYVKGVVSAEMPAEFHIEALKAQAVAARTYA
CCCEEEECCCCCEEEEEECCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LAHMKGFGENQYNKRINADVCDSVQSQVFMPKDKRIKSWPKEKRNEYWNKIEESVNSTKG
HHHHHCCCCCHHCCCCCHHHHHHHHHCEECCCCCHHHCCCHHHHHHHHHHHHHHHCCCCC
NVLVYNNEIVMAPYYFATSNGKTEDSENVFNSEVPYLKSVKSPGEEKAPKFKSSKKISYD
CEEEECCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCCHH
QFIKIIKTQYPKCTINKKDINKKIIIKDKTESGSIKKIKIDNIEIKGTEFRKILGLNSSK
HHHHHHHHCCCCEECCHHCCCCEEEEEECCCCCCEEEEEECCEEECCHHHHHHHCCCCCE
FSLEFKDNYLIVNCNGYGHNVGMSQWGANSMGKSGKKYDYILKHYYKGINMEILKYSD
EEEEEECCEEEEEECCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3011962; 9384377 [H]