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The map label for this gene is ysnB [H]

Identifier: 170754572

GI number: 170754572

Start: 3525601

End: 3526071

Strand: Reverse

Name: ysnB [H]

Synonym: CLD_1262

Alternate gene names: 170754572

Gene position: 3526071-3525601 (Counterclockwise)

Preceding gene: 170756402

Following gene: 170756975

Centisome position: 89.08

GC content: 28.45

Gene sequence:

>471_bases
TTGAAAATAGGTGTTATTAGTGATACCCATAGATATATAGGAGATGCTATTTCTCTTGTAAATAGTTTAGGTAATGTAAA
CTTAATAATTCATTTAGGAGATAATGTAGAGGATGTAAAAATGTTGTCTTCTGTTTATAAAGGGAAAATTATAAATGTAA
GAGGAAATTGTGATTTTTCAAAAGAAACTCCATCTGAATTAATAGAAAATATAGGAGGAAAAAGATTTTTTATAACTCAT
GGAAATAGATATGATGTAAAGTATAACTTAGCTAAATTAAGATATAGAGCATTAGAATTAGAAGCTGATATAGCCCTATT
TGGTCATACTCATGTATCTCAAATAGAGTATATAGATGGGATATGGTTTATTAACCCTGGTAGCCCTACACTTCCAAGAA
ATGGAGTTAGAAGTGTTGCTATTATAGGTATTGAGGGAGATAAAGTAGTGCCTATTATAAAAAAGATATAA

Upstream 100 bases:

>100_bases
ATGGATTCTCAAACTAAAAATTCTATAAGTCATAGGGGAGAAGCCTTTAGAAAATTAAAATGCGAATTAGAAAAATATAT
ATAGATAAGGGGGGGCAATT

Downstream 100 bases:

>100_bases
TGAAATTTTAAAAAACATAAAAAAAAATAAAAAAATGTATTGACGAATATAATTATATGATGTAGAATAGTTTATGTCGT
TGAGAGTTGCAAGAACAAAC

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKIGVISDTHRYIGDAISLVNSLGNVNLIIHLGDNVEDVKMLSSVYKGKIINVRGNCDFSKETPSELIENIGGKRFFITH
GNRYDVKYNLAKLRYRALELEADIALFGHTHVSQIEYIDGIWFINPGSPTLPRNGVRSVAIIGIEGDKVVPIIKKI

Sequences:

>Translated_156_residues
MKIGVISDTHRYIGDAISLVNSLGNVNLIIHLGDNVEDVKMLSSVYKGKIINVRGNCDFSKETPSELIENIGGKRFFITH
GNRYDVKYNLAKLRYRALELEADIALFGHTHVSQIEYIDGIWFINPGSPTLPRNGVRSVAIIGIEGDKVVPIIKKI
>Mature_156_residues
MKIGVISDTHRYIGDAISLVNSLGNVNLIIHLGDNVEDVKMLSSVYKGKIINVRGNCDFSKETPSELIENIGGKRFFITH
GNRYDVKYNLAKLRYRALELEADIALFGHTHVSQIEYIDGIWFINPGSPTLPRNGVRSVAIIGIEGDKVVPIIKKI

Specific function: Unknown

COG id: COG0622

COG function: function code R; Predicted phosphoesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR020935
- InterPro:   IPR000979 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 17362; Mature: 17362

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGVISDTHRYIGDAISLVNSLGNVNLIIHLGDNVEDVKMLSSVYKGKIINVRGNCDFS
CEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHCCEEEEEECCCCCC
KETPSELIENIGGKRFFITHGNRYDVKYNLAKLRYRALELEADIALFGHTHVSQIEYIDG
CCCHHHHHHHCCCCEEEEECCCEEEEEEEHHHHEEEEEEEECCEEEECCCCCCEEEEECE
IWFINPGSPTLPRNGVRSVAIIGIEGDKVVPIIKKI
EEEECCCCCCCCCCCCCEEEEEEECCCEEEHHEECC
>Mature Secondary Structure
MKIGVISDTHRYIGDAISLVNSLGNVNLIIHLGDNVEDVKMLSSVYKGKIINVRGNCDFS
CEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHCCEEEEEECCCCCC
KETPSELIENIGGKRFFITHGNRYDVKYNLAKLRYRALELEADIALFGHTHVSQIEYIDG
CCCHHHHHHHCCCCEEEEECCCEEEEEEEHHHHEEEEEEEECCEEEECCCCCCEEEEECE
IWFINPGSPTLPRNGVRSVAIIGIEGDKVVPIIKKI
EEEECCCCCCCCCCCCCEEEEEEECCCEEEHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]