Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170754559

Identifier: 170754559

GI number: 170754559

Start: 1532400

End: 1533407

Strand: Direct

Name: 170754559

Synonym: CLD_3170

Alternate gene names: NA

Gene position: 1532400-1533407 (Clockwise)

Preceding gene: 170757091

Following gene: 170757084

Centisome position: 38.71

GC content: 29.17

Gene sequence:

>1008_bases
ATGAAAAAGAGAATTGGTATATTATTAATGGCCTTTCTTTTAATTTTTTCAGCTTTATTTGTGGTAGGTTGCTCAAAAAA
GGAGGAAAAGAAGGAAAGAACAAATACTACACAGGAAAGTAATAAAAAAGAAAAAATTAAAATAGCCACTTTAAAAGGAC
CTACTGGTATGGGAATGGTTAAACTTATGGAAGAAAACAAAGAGGATTATGATATTTCTTTATTTGATGCTCCAGATCAA
ATAGTTTCTAAAGTAGTAAGTGGAGAAGTAGATGCAGCGGCAGTTCCATCTAATTTGGCTTCTGTTTTATATAATAAAAC
AAAGGGGCAAGTTCAATTAGTTGGAGTAAACACTTTAGGGGTCTTATATATTGTAGAAAACGGAGATACTATAAAAAATA
TAAAAGATCTAAAGGGTGAAACTATTTATGCTACAGGAAAGGGGGCTACTCCAGAATTTATTTTGAATTATATATTAAAG
AAGAATGGATTGGATCCAGATAAGGATGTAAAAATAGAATATAAAGCTCAACATAATGATTTAGCAACTTTAGTAGCTTC
AAAAAAAGCAAAAATAGCAGTACTTCCAGAACCTTTTGTAACACTATCCAGAACTAAAAATAAGGATTTAAAAGTACAAT
TAGATTTAACAAAGGAATGGGAAAAAGTATCTGGAGAAGGAAAATTAACCATGGGAGCATTGGTATTTAAAAAGGATTTC
ATAGATAAAAGAGGAGAAGATGTAGAAACTTTTATAAATAATTATAAAAAATCTGTAGAGTTTGTAAATAACAATAAGGA
AGAAGCTAGCAAACTTATGGAGAAAAACGGTATAGTATCAAAGGCAAAAATAGCAGAGATGGCTATTCCAAAATGTAATA
TAGTATTTATGGATTCTAAAGATTCTAAGGATTCTCTAAAAAAATTTTATAATATTTTAAAAGACAATGACCCAAAATCC
ATTGGAGGAAAACTACCAGATGAAGATTTCTATTATAAGGGAAAATAA

Upstream 100 bases:

>100_bases
AATAAAGATAAAAAATATGAAATGGGAAAAGTCGAATCCAGTGTTTATATATGATTAAAAAATAAAAAGCTTATTAATAT
AATACAAGGAGGTTATATAT

Downstream 100 bases:

>100_bases
AACAATTTCAAAATTAGTTAGAAGAACTTTAATAATAATATTCTGGGTATTTATATGGGAGCTTAGCTCCCTTTTTATAA
ATAACGAGATTTTGCTTCCA

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MKKRIGILLMAFLLIFSALFVVGCSKKEEKKERTNTTQESNKKEKIKIATLKGPTGMGMVKLMEENKEDYDISLFDAPDQ
IVSKVVSGEVDAAAVPSNLASVLYNKTKGQVQLVGVNTLGVLYIVENGDTIKNIKDLKGETIYATGKGATPEFILNYILK
KNGLDPDKDVKIEYKAQHNDLATLVASKKAKIAVLPEPFVTLSRTKNKDLKVQLDLTKEWEKVSGEGKLTMGALVFKKDF
IDKRGEDVETFINNYKKSVEFVNNNKEEASKLMEKNGIVSKAKIAEMAIPKCNIVFMDSKDSKDSLKKFYNILKDNDPKS
IGGKLPDEDFYYKGK

Sequences:

>Translated_335_residues
MKKRIGILLMAFLLIFSALFVVGCSKKEEKKERTNTTQESNKKEKIKIATLKGPTGMGMVKLMEENKEDYDISLFDAPDQ
IVSKVVSGEVDAAAVPSNLASVLYNKTKGQVQLVGVNTLGVLYIVENGDTIKNIKDLKGETIYATGKGATPEFILNYILK
KNGLDPDKDVKIEYKAQHNDLATLVASKKAKIAVLPEPFVTLSRTKNKDLKVQLDLTKEWEKVSGEGKLTMGALVFKKDF
IDKRGEDVETFINNYKKSVEFVNNNKEEASKLMEKNGIVSKAKIAEMAIPKCNIVFMDSKDSKDSLKKFYNILKDNDPKS
IGGKLPDEDFYYKGK
>Mature_335_residues
MKKRIGILLMAFLLIFSALFVVGCSKKEEKKERTNTTQESNKKEKIKIATLKGPTGMGMVKLMEENKEDYDISLFDAPDQ
IVSKVVSGEVDAAAVPSNLASVLYNKTKGQVQLVGVNTLGVLYIVENGDTIKNIKDLKGETIYATGKGATPEFILNYILK
KNGLDPDKDVKIEYKAQHNDLATLVASKKAKIAVLPEPFVTLSRTKNKDLKVQLDLTKEWEKVSGEGKLTMGALVFKKDF
IDKRGEDVETFINNYKKSVEFVNNNKEEASKLMEKNGIVSKAKIAEMAIPKCNIVFMDSKDSKDSLKKFYNILKDNDPKS
IGGKLPDEDFYYKGK

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37369; Mature: 37369

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRIGILLMAFLLIFSALFVVGCSKKEEKKERTNTTQESNKKEKIKIATLKGPTGMGMV
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHCCCCCEEEEEEECCCCCCCHH
KLMEENKEDYDISLFDAPDQIVSKVVSGEVDAAAVPSNLASVLYNKTKGQVQLVGVNTLG
HHHHCCCCCCEEEEECCHHHHHHHHHCCCCCCHHCHHHHHHHHHCCCCCEEEEEEEECEE
VLYIVENGDTIKNIKDLKGETIYATGKGATPEFILNYILKKNGLDPDKDVKIEYKAQHND
EEEEEECCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCH
LATLVASKKAKIAVLPEPFVTLSRTKNKDLKVQLDLTKEWEKVSGEGKLTMGALVFKKDF
HHHHHHCCCCEEEECCCCCEEEECCCCCCEEEEEECCHHHHHHCCCCCEEHHHHHHHHHH
IDKRGEDVETFINNYKKSVEFVNNNKEEASKLMEKNGIVSKAKIAEMAIPKCNIVFMDSK
HHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEECC
DSKDSLKKFYNILKDNDPKSIGGKLPDEDFYYKGK
CCHHHHHHHHHHHCCCCCHHCCCCCCCCCCEECCC
>Mature Secondary Structure
MKKRIGILLMAFLLIFSALFVVGCSKKEEKKERTNTTQESNKKEKIKIATLKGPTGMGMV
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHCCCCCEEEEEEECCCCCCCHH
KLMEENKEDYDISLFDAPDQIVSKVVSGEVDAAAVPSNLASVLYNKTKGQVQLVGVNTLG
HHHHCCCCCCEEEEECCHHHHHHHHHCCCCCCHHCHHHHHHHHHCCCCCEEEEEEEECEE
VLYIVENGDTIKNIKDLKGETIYATGKGATPEFILNYILKKNGLDPDKDVKIEYKAQHND
EEEEEECCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCH
LATLVASKKAKIAVLPEPFVTLSRTKNKDLKVQLDLTKEWEKVSGEGKLTMGALVFKKDF
HHHHHHCCCCEEEECCCCCEEEECCCCCCEEEEEECCHHHHHHCCCCCEEHHHHHHHHHH
IDKRGEDVETFINNYKKSVEFVNNNKEEASKLMEKNGIVSKAKIAEMAIPKCNIVFMDSK
HHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEECC
DSKDSLKKFYNILKDNDPKSIGGKLPDEDFYYKGK
CCHHHHHHHHHHHCCCCCHHCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA