| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754504
Identifier: 170754504
GI number: 170754504
Start: 918572
End: 919978
Strand: Direct
Name: 170754504
Synonym: CLD_3761
Alternate gene names: NA
Gene position: 918572-919978 (Clockwise)
Preceding gene: 170755960
Following gene: 170754721
Centisome position: 23.21
GC content: 22.1
Gene sequence:
>1407_bases ATGCATTTTTGCAGAAAATGTGGCAATAAGTTACAAGAAAATTCAAAACGTTGTAATACCTGTGGAAGTGAATTAGAAAA AATACATAAAGAAGAAATAAGCAGTATAACGGATAAAGAGAAGCTTTTGGATAATGAAATTTTTAATGATGAACATATTT TAAAGTATAAAGAAGAACCTTTAGAAATAATAAGAAAATTTAATTTAATTAAAAAAATAAAAGAAAATAAAGTTTTTTTA ATTGCTATTTTAATATTAATAATAATAGTTACACCACTTATAAAAAATCCTATTAAAAATTTTGTTATAAGAAAGAATCC CGCAAATTGGTTAGTGTATGCTGCTGATAAATGTAAAAAATCAGATATCCTAGATACTGTTAGTGACTTTAAAATAAAAT CTACAGTAGAATCACAGGAACTTATGAACTATAAGGATATAGAAAATATAATAGAACAATGCACTTTAAGAGTAAATAAC AAAATAAATAAAAAAACTAATGAAAGATATAGTAAAGTCAGCTTAATATATAAAGAAGAAAATATTTTAAATGGAGAAAT GTATAGTAATAAAGAATATATGGCTATATCAATGCCACAATTATACAAAGATATAATGTACATAAAATGGGAAGATGTAA ATAAATTAATAAATAATAATAAAGAAAATAAAAATATTTCAGAAACAATAGATCCAAAAAACTATGAGAATGTTTTAAAC ATAAAAAAATCTAAATACTATGATAATGTCAATGGAGATTATAAAGAATTTTTTTATAATATTATGGATGATTATGTTCA AAGAGGAGATAAGGTAGATATAGTTACAAAACAAGAAGATAAAGAAAAGACTATAAAATGTGATGAAATAGTAGTACACT TAGATAATGAGAGAATAATAAAAATTTTAAATGCTTTTTTTCAAAAGATATCAGAGGATGAAAATTTAAAATTATTGGTT AGGGACAAGGTCTTTGAATTTTTAAGTACCGTCCAAAAAAATCAAGATCTTAATAAATTTAATCTTAGCAAAGAAGAGGC GGATAATATTAAAAGAGATTTTGACTCAGAGTATGATTCTTTTATGAAAGAGTTGAGCCATGTTGAAAAAATAGATAAAA AAGCTTCTAATGGTAAAATAAATAGTTTAACAAAAGTAAAAATTGATTCTAAAAATTATATAAGAGGAGTACAATCTGAA ATTTCTATAGACAAGAAAAAGACTTCTTTTAATTTTATATCAAATACTGTGATTAATTCTATTGACTCTAAATTAGATAT AAAAAAGATATCTAAAGAAGGGGCTAAAGATATAAGTAAATTTACAGCAAAAGACAGAGAAAATATAGTAATAGAAATAG AGAATAATATACAAAAAATTATGTTTTTAAAACTAAATATAAAGTAA
Upstream 100 bases:
>100_bases AAAATAAAAGGGAACTCTTATTTATGTATTGTTTTAAATTGATAATATAAAAATAAAATGTTAGAATTAAATATAATTTG TAGAGGAGGGAGAATAGTTT
Downstream 100 bases:
>100_bases TAAAACTTAAGAGGTAATTTTTAAATTAGATAAATTATTTAAATTTAGGGAAATATTTTATCTGATATAAATATTACCTT TTGATTTTAAATAAAGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MHFCRKCGNKLQENSKRCNTCGSELEKIHKEEISSITDKEKLLDNEIFNDEHILKYKEEPLEIIRKFNLIKKIKENKVFL IAILILIIIVTPLIKNPIKNFVIRKNPANWLVYAADKCKKSDILDTVSDFKIKSTVESQELMNYKDIENIIEQCTLRVNN KINKKTNERYSKVSLIYKEENILNGEMYSNKEYMAISMPQLYKDIMYIKWEDVNKLINNNKENKNISETIDPKNYENVLN IKKSKYYDNVNGDYKEFFYNIMDDYVQRGDKVDIVTKQEDKEKTIKCDEIVVHLDNERIIKILNAFFQKISEDENLKLLV RDKVFEFLSTVQKNQDLNKFNLSKEEADNIKRDFDSEYDSFMKELSHVEKIDKKASNGKINSLTKVKIDSKNYIRGVQSE ISIDKKKTSFNFISNTVINSIDSKLDIKKISKEGAKDISKFTAKDRENIVIEIENNIQKIMFLKLNIK
Sequences:
>Translated_468_residues MHFCRKCGNKLQENSKRCNTCGSELEKIHKEEISSITDKEKLLDNEIFNDEHILKYKEEPLEIIRKFNLIKKIKENKVFL IAILILIIIVTPLIKNPIKNFVIRKNPANWLVYAADKCKKSDILDTVSDFKIKSTVESQELMNYKDIENIIEQCTLRVNN KINKKTNERYSKVSLIYKEENILNGEMYSNKEYMAISMPQLYKDIMYIKWEDVNKLINNNKENKNISETIDPKNYENVLN IKKSKYYDNVNGDYKEFFYNIMDDYVQRGDKVDIVTKQEDKEKTIKCDEIVVHLDNERIIKILNAFFQKISEDENLKLLV RDKVFEFLSTVQKNQDLNKFNLSKEEADNIKRDFDSEYDSFMKELSHVEKIDKKASNGKINSLTKVKIDSKNYIRGVQSE ISIDKKKTSFNFISNTVINSIDSKLDIKKISKEGAKDISKFTAKDRENIVIEIENNIQKIMFLKLNIK >Mature_468_residues MHFCRKCGNKLQENSKRCNTCGSELEKIHKEEISSITDKEKLLDNEIFNDEHILKYKEEPLEIIRKFNLIKKIKENKVFL IAILILIIIVTPLIKNPIKNFVIRKNPANWLVYAADKCKKSDILDTVSDFKIKSTVESQELMNYKDIENIIEQCTLRVNN KINKKTNERYSKVSLIYKEENILNGEMYSNKEYMAISMPQLYKDIMYIKWEDVNKLINNNKENKNISETIDPKNYENVLN IKKSKYYDNVNGDYKEFFYNIMDDYVQRGDKVDIVTKQEDKEKTIKCDEIVVHLDNERIIKILNAFFQKISEDENLKLLV RDKVFEFLSTVQKNQDLNKFNLSKEEADNIKRDFDSEYDSFMKELSHVEKIDKKASNGKINSLTKVKIDSKNYIRGVQSE ISIDKKKTSFNFISNTVINSIDSKLDIKKISKEGAKDISKFTAKDRENIVIEIENNIQKIMFLKLNIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55115; Mature: 55115
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFCRKCGNKLQENSKRCNTCGSELEKIHKEEISSITDKEKLLDNEIFNDEHILKYKEEP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LEIIRKFNLIKKIKENKVFLIAILILIIIVTPLIKNPIKNFVIRKNPANWLVYAADKCKK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCEEEEECCCCCH SDILDTVSDFKIKSTVESQELMNYKDIENIIEQCTLRVNNKINKKTNERYSKVSLIYKEE HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECC NILNGEMYSNKEYMAISMPQLYKDIMYIKWEDVNKLINNNKENKNISETIDPKNYENVLN CCCCCCEECCCCEEEEEHHHHHHHHHEEEHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHH IKKSKYYDNVNGDYKEFFYNIMDDYVQRGDKVDIVTKQEDKEKTIKCDEIVVHLDNERII HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHCEEHHHEEEEECCHHHH KILNAFFQKISEDENLKLLVRDKVFEFLSTVQKNQDLNKFNLSKEEADNIKRDFDSEYDS HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH FMKELSHVEKIDKKASNGKINSLTKVKIDSKNYIRGVQSEISIDKKKTSFNFISNTVINS HHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IDSKLDIKKISKEGAKDISKFTAKDRENIVIEIENNIQKIMFLKLNIK HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEECC >Mature Secondary Structure MHFCRKCGNKLQENSKRCNTCGSELEKIHKEEISSITDKEKLLDNEIFNDEHILKYKEEP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LEIIRKFNLIKKIKENKVFLIAILILIIIVTPLIKNPIKNFVIRKNPANWLVYAADKCKK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCEEEEECCCCCH SDILDTVSDFKIKSTVESQELMNYKDIENIIEQCTLRVNNKINKKTNERYSKVSLIYKEE HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECC NILNGEMYSNKEYMAISMPQLYKDIMYIKWEDVNKLINNNKENKNISETIDPKNYENVLN CCCCCCEECCCCEEEEEHHHHHHHHHEEEHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHH IKKSKYYDNVNGDYKEFFYNIMDDYVQRGDKVDIVTKQEDKEKTIKCDEIVVHLDNERII HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHCEEHHHEEEEECCHHHH KILNAFFQKISEDENLKLLVRDKVFEFLSTVQKNQDLNKFNLSKEEADNIKRDFDSEYDS HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH FMKELSHVEKIDKKASNGKINSLTKVKIDSKNYIRGVQSEISIDKKKTSFNFISNTVINS HHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IDSKLDIKKISKEGAKDISKFTAKDRENIVIEIENNIQKIMFLKLNIK HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA